Strain Fitness in Escherichia coli ECOR27 around NOLOHH_21200

Experiment: Bas21

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas21
4,171,388	+				-0.3
4,171,503	-				-0.0
4,171,517	-				+0.1
4,171,542	-				+1.2
4,171,630	-	flgD	NOLOHH_21195	0.19	-0.6
4,171,654	+	flgD	NOLOHH_21195	0.22	+1.1
4,171,661	+	flgD	NOLOHH_21195	0.23	+0.1
4,171,661	+	flgD	NOLOHH_21195	0.23	-0.6
4,171,661	+	flgD	NOLOHH_21195	0.23	+0.8
4,171,661	+	flgD	NOLOHH_21195	0.23	-0.6
4,171,662	-	flgD	NOLOHH_21195	0.23	+0.0
4,171,662	-	flgD	NOLOHH_21195	0.23	-0.7
4,171,928	-	flgD	NOLOHH_21195	0.61	+0.1
4,171,942	-	flgD	NOLOHH_21195	0.63	-1.0
4,172,105	-	flgD	NOLOHH_21195	0.87	-0.1
4,172,136	+				+1.8
4,172,137	-				+0.9
4,172,160	+				-1.4
4,172,196	+				+0.3
4,172,197	-				+0.3
4,172,197	-				+0.5
4,172,381	-	flgC	NOLOHH_21200	0.43	-1.2
4,172,410	-	flgC	NOLOHH_21200	0.50	-0.7
4,172,428	-	flgC	NOLOHH_21200	0.54	-0.3
4,172,632	-				-0.2
4,172,769	-	flgB	NOLOHH_21205	0.37	-1.1
4,173,032	+				-0.4
4,173,033	-				-0.1
4,173,033	-				-0.4
4,173,070	-				+0.5
4,173,102	-				+0.1
4,173,120	+				+0.5
4,173,124	+				-1.1
4,173,125	-				+0.7
4,173,153	-				-0.3
4,173,330	+	flgA	NOLOHH_21210	0.22	+0.2
4,173,344	+	flgA	NOLOHH_21210	0.24	+0.2
4,173,476	-	flgA	NOLOHH_21210	0.44	+2.8
4,173,476	-	flgA	NOLOHH_21210	0.44	+0.5