Experiment: Experiment:PE, population C11, passage 1 (PE-S-C11-P1)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LU632_RS23645 and LU632_RS23650 are separated by 26 nucleotides LU632_RS23650 and LU632_RS23655 are separated by 256 nucleotides LU632_RS23655 and LU632_RS23660 overlap by 1 nucleotides LU632_RS23660 and LU632_RS23665 are separated by 175 nucleotides
LU632_RS23645: LU632_RS23645 - GNAT family N-acetyltransferase, at 4,511,801 to 4,512,469
_RS23645
LU632_RS23650: LU632_RS23650 - DUF4158 domain-containing protein, at 4,512,496 to 4,512,618
_RS23650
LU632_RS23655: LU632_RS23655 - ribbon-helix-helix domain-containing protein, at 4,512,875 to 4,513,162
_RS23655
LU632_RS23660: LU632_RS23660 - peptide transporter, at 4,513,162 to 4,513,416
_RS23660
LU632_RS23665: LU632_RS23665 - IS481 family transposase, at 4,513,592 to 4,514,632
_RS23665
Position (kb) 4513
4514 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4512.220 kb on - strand, within LU632_RS23645 at 4512.232 kb on - strand, within LU632_RS23645 at 4512.239 kb on + strand, within LU632_RS23645 at 4512.240 kb on - strand, within LU632_RS23645 at 4512.318 kb on + strand, within LU632_RS23645 at 4512.319 kb on - strand, within LU632_RS23645 at 4512.344 kb on + strand, within LU632_RS23645 at 4512.344 kb on + strand, within LU632_RS23645 at 4512.345 kb on - strand, within LU632_RS23645 at 4512.345 kb on - strand, within LU632_RS23645 at 4512.401 kb on + strand, within LU632_RS23645 at 4512.401 kb on + strand, within LU632_RS23645 at 4512.402 kb on - strand, within LU632_RS23645 at 4512.403 kb on + strand at 4512.403 kb on + strand at 4512.403 kb on + strand at 4512.403 kb on + strand at 4512.403 kb on + strand at 4512.404 kb on - strand at 4512.422 kb on + strand at 4512.523 kb on + strand, within LU632_RS23650 at 4512.526 kb on + strand, within LU632_RS23650 at 4512.526 kb on + strand, within LU632_RS23650 at 4512.527 kb on - strand, within LU632_RS23650 at 4512.657 kb on + strand at 4512.699 kb on - strand at 4512.785 kb on - strand at 4512.852 kb on + strand at 4512.853 kb on - strand at 4512.876 kb on + strand at 4512.897 kb on + strand at 4512.914 kb on + strand, within LU632_RS23655 at 4512.915 kb on - strand, within LU632_RS23655 at 4512.915 kb on - strand, within LU632_RS23655 at 4512.915 kb on - strand, within LU632_RS23655 at 4512.934 kb on + strand, within LU632_RS23655 at 4512.942 kb on - strand, within LU632_RS23655 at 4512.986 kb on + strand, within LU632_RS23655 at 4512.986 kb on + strand, within LU632_RS23655 at 4512.987 kb on - strand, within LU632_RS23655 at 4512.990 kb on - strand, within LU632_RS23655 at 4513.076 kb on + strand, within LU632_RS23655 at 4513.077 kb on - strand, within LU632_RS23655 at 4513.084 kb on + strand, within LU632_RS23655 at 4513.085 kb on - strand, within LU632_RS23655 at 4513.089 kb on - strand, within LU632_RS23655 at 4513.180 kb on - strand at 4513.189 kb on + strand, within LU632_RS23660 at 4513.189 kb on + strand, within LU632_RS23660 at 4513.189 kb on + strand, within LU632_RS23660 at 4513.189 kb on + strand, within LU632_RS23660 at 4513.349 kb on - strand, within LU632_RS23660 at 4513.424 kb on - strand at 4513.446 kb on + strand at 4513.447 kb on - strand at 4513.459 kb on + strand at 4513.487 kb on - strand at 4513.493 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Experiment:PE, population C11, passage 1 (PE-S-C11-P1) remove 4,512,220 - LU632_RS23645 0.63 +0.4 4,512,232 - LU632_RS23645 0.64 -0.1 4,512,239 + LU632_RS23645 0.65 +0.4 4,512,240 - LU632_RS23645 0.66 -1.0 4,512,318 + LU632_RS23645 0.77 +1.0 4,512,319 - LU632_RS23645 0.77 +0.1 4,512,344 + LU632_RS23645 0.81 +1.6 4,512,344 + LU632_RS23645 0.81 +1.3 4,512,345 - LU632_RS23645 0.81 -0.8 4,512,345 - LU632_RS23645 0.81 +2.2 4,512,401 + LU632_RS23645 0.90 +1.4 4,512,401 + LU632_RS23645 0.90 +1.9 4,512,402 - LU632_RS23645 0.90 +2.5 4,512,403 + +0.6 4,512,403 + +0.5 4,512,403 + +2.8 4,512,403 + -1.8 4,512,403 + -1.5 4,512,404 - +1.6 4,512,422 + +0.7 4,512,523 + LU632_RS23650 0.22 +0.7 4,512,526 + LU632_RS23650 0.24 +1.4 4,512,526 + LU632_RS23650 0.24 -0.5 4,512,527 - LU632_RS23650 0.25 -1.5 4,512,657 + +1.4 4,512,699 - +2.3 4,512,785 - +0.4 4,512,852 + -1.2 4,512,853 - +1.3 4,512,876 + +1.3 4,512,897 + +0.4 4,512,914 + LU632_RS23655 0.14 -1.7 4,512,915 - LU632_RS23655 0.14 -0.7 4,512,915 - LU632_RS23655 0.14 +0.4 4,512,915 - LU632_RS23655 0.14 -0.3 4,512,934 + LU632_RS23655 0.20 +0.3 4,512,942 - LU632_RS23655 0.23 -1.7 4,512,986 + LU632_RS23655 0.39 +0.2 4,512,986 + LU632_RS23655 0.39 -0.5 4,512,987 - LU632_RS23655 0.39 -0.6 4,512,990 - LU632_RS23655 0.40 -1.8 4,513,076 + LU632_RS23655 0.70 -2.0 4,513,077 - LU632_RS23655 0.70 +1.2 4,513,084 + LU632_RS23655 0.73 -0.9 4,513,085 - LU632_RS23655 0.73 -0.2 4,513,089 - LU632_RS23655 0.74 +0.3 4,513,180 - +0.1 4,513,189 + LU632_RS23660 0.11 -1.8 4,513,189 + LU632_RS23660 0.11 -1.3 4,513,189 + LU632_RS23660 0.11 -1.9 4,513,189 + LU632_RS23660 0.11 -0.2 4,513,349 - LU632_RS23660 0.73 -0.3 4,513,424 - -0.5 4,513,446 + +0.3 4,513,447 - +1.0 4,513,459 + -0.7 4,513,487 - +0.4 4,513,493 - +0.8
Or see this region's nucleotide sequence