Strain Fitness in Fusobacterium nucleatum SB010 around HUW76_05655

Experiment: Time0_glycerolstock

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHUW76_05650 and HUW76_05655 are separated by 18 nucleotidesHUW76_05655 and HUW76_05660 are separated by 47 nucleotidesHUW76_05660 and HUW76_05665 are separated by 69 nucleotides HUW76_05650: HUW76_05650 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase, at 1,141,956 to 1,142,963 _05650 HUW76_05655: HUW76_05655 - hypothetical protein, at 1,142,982 to 1,143,305 _05655 HUW76_05660: HUW76_05660 - hypothetical protein, at 1,143,353 to 1,143,589 _05660 HUW76_05665: HUW76_05665 - NAD(P)/FAD-dependent oxidoreductase, at 1,143,659 to 1,145,242 _05665 Position (kb) 1142 1143 1144Strain fitness (log2 ratio) -1 0 1 2at 1143.071 kb on - strand, within HUW76_05655at 1143.086 kb on + strand, within HUW76_05655at 1143.094 kb on - strand, within HUW76_05655at 1143.143 kb on + strand, within HUW76_05655at 1143.143 kb on - strand, within HUW76_05655at 1143.175 kb on - strand, within HUW76_05655at 1143.291 kb on + strandat 1143.382 kb on - strand, within HUW76_05660at 1143.514 kb on - strand, within HUW76_05660at 1143.516 kb on + strand, within HUW76_05660at 1143.526 kb on - strand, within HUW76_05660at 1143.617 kb on + strandat 1143.637 kb on - strandat 1143.664 kb on - strandat 1143.709 kb on + strandat 1143.717 kb on - strandat 1143.731 kb on + strandat 1143.822 kb on - strand, within HUW76_05665at 1144.010 kb on + strand, within HUW76_05665at 1144.186 kb on - strand, within HUW76_05665at 1144.186 kb on - strand, within HUW76_05665at 1144.210 kb on - strand, within HUW76_05665at 1144.210 kb on - strand, within HUW76_05665at 1144.220 kb on - strand, within HUW76_05665at 1144.260 kb on + strand, within HUW76_05665at 1144.260 kb on + strand, within HUW76_05665at 1144.293 kb on + strand, within HUW76_05665

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Per-strain Table

Position Strand Gene LocusTag Fraction Time0_glycerolstock
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1,143,071 - HUW76_05655 0.27 +1.2
1,143,086 + HUW76_05655 0.32 +0.6
1,143,094 - HUW76_05655 0.35 +1.8
1,143,143 + HUW76_05655 0.50 -0.4
1,143,143 - HUW76_05655 0.50 +1.4
1,143,175 - HUW76_05655 0.60 +1.6
1,143,291 + -0.4
1,143,382 - HUW76_05660 0.12 -0.0
1,143,514 - HUW76_05660 0.68 -0.7
1,143,516 + HUW76_05660 0.69 -1.0
1,143,526 - HUW76_05660 0.73 -0.5
1,143,617 + +0.0
1,143,637 - +0.1
1,143,664 - -0.6
1,143,709 + +0.7
1,143,717 - -0.7
1,143,731 + +0.4
1,143,822 - HUW76_05665 0.10 -0.2
1,144,010 + HUW76_05665 0.22 +2.3
1,144,186 - HUW76_05665 0.33 -0.0
1,144,186 - HUW76_05665 0.33 -0.2
1,144,210 - HUW76_05665 0.35 -0.1
1,144,210 - HUW76_05665 0.35 -0.9
1,144,220 - HUW76_05665 0.35 -0.5
1,144,260 + HUW76_05665 0.38 -0.4
1,144,260 + HUW76_05665 0.38 +0.5
1,144,293 + HUW76_05665 0.40 +0.3

Or see this region's nucleotide sequence