Experiment: Time0_glycerolstock
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HUW76_05650 and HUW76_05655 are separated by 18 nucleotides HUW76_05655 and HUW76_05660 are separated by 47 nucleotides HUW76_05660 and HUW76_05665 are separated by 69 nucleotides
HUW76_05650: HUW76_05650 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase, at 1,141,956 to 1,142,963
_05650
HUW76_05655: HUW76_05655 - hypothetical protein, at 1,142,982 to 1,143,305
_05655
HUW76_05660: HUW76_05660 - hypothetical protein, at 1,143,353 to 1,143,589
_05660
HUW76_05665: HUW76_05665 - NAD(P)/FAD-dependent oxidoreductase, at 1,143,659 to 1,145,242
_05665
Position (kb)
1142
1143
1144 Strain fitness (log2 ratio)
-1
0
1
2 at 1143.071 kb on - strand, within HUW76_05655 at 1143.086 kb on + strand, within HUW76_05655 at 1143.094 kb on - strand, within HUW76_05655 at 1143.143 kb on + strand, within HUW76_05655 at 1143.143 kb on - strand, within HUW76_05655 at 1143.175 kb on - strand, within HUW76_05655 at 1143.291 kb on + strand at 1143.382 kb on - strand, within HUW76_05660 at 1143.514 kb on - strand, within HUW76_05660 at 1143.516 kb on + strand, within HUW76_05660 at 1143.526 kb on - strand, within HUW76_05660 at 1143.617 kb on + strand at 1143.637 kb on - strand at 1143.664 kb on - strand at 1143.709 kb on + strand at 1143.717 kb on - strand at 1143.731 kb on + strand at 1143.822 kb on - strand, within HUW76_05665 at 1144.010 kb on + strand, within HUW76_05665 at 1144.186 kb on - strand, within HUW76_05665 at 1144.186 kb on - strand, within HUW76_05665 at 1144.210 kb on - strand, within HUW76_05665 at 1144.210 kb on - strand, within HUW76_05665 at 1144.220 kb on - strand, within HUW76_05665 at 1144.260 kb on + strand, within HUW76_05665 at 1144.260 kb on + strand, within HUW76_05665 at 1144.293 kb on + strand, within HUW76_05665
Per-strain Table
Position Strand Gene LocusTag Fraction Time0_glycerolstock remove 1,143,071 - HUW76_05655 0.27 +1.2 1,143,086 + HUW76_05655 0.32 +0.6 1,143,094 - HUW76_05655 0.35 +1.8 1,143,143 + HUW76_05655 0.50 -0.4 1,143,143 - HUW76_05655 0.50 +1.4 1,143,175 - HUW76_05655 0.60 +1.6 1,143,291 + -0.4 1,143,382 - HUW76_05660 0.12 -0.0 1,143,514 - HUW76_05660 0.68 -0.7 1,143,516 + HUW76_05660 0.69 -1.0 1,143,526 - HUW76_05660 0.73 -0.5 1,143,617 + +0.0 1,143,637 - +0.1 1,143,664 - -0.6 1,143,709 + +0.7 1,143,717 - -0.7 1,143,731 + +0.4 1,143,822 - HUW76_05665 0.10 -0.2 1,144,010 + HUW76_05665 0.22 +2.3 1,144,186 - HUW76_05665 0.33 -0.0 1,144,186 - HUW76_05665 0.33 -0.2 1,144,210 - HUW76_05665 0.35 -0.1 1,144,210 - HUW76_05665 0.35 -0.9 1,144,220 - HUW76_05665 0.35 -0.5 1,144,260 + HUW76_05665 0.38 -0.4 1,144,260 + HUW76_05665 0.38 +0.5 1,144,293 + HUW76_05665 0.40 +0.3
Or see this region's nucleotide sequence