Experiment: Time0_glycerolstock
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HUW76_04750 and HUW76_04755 are separated by 20 nucleotides HUW76_04755 and HUW76_04760 are separated by 25 nucleotides HUW76_04760 and HUW76_04765 are separated by 100 nucleotides HUW76_04765 and HUW76_04770 are separated by 75 nucleotides
HUW76_04750: HUW76_04750 - acyl-CoA dehydrogenase, at 957,157 to 958,302
_04750
HUW76_04755: HUW76_04755 - electron transfer flavoprotein subunit beta/FixA family protein, at 958,323 to 959,111
_04755
HUW76_04760: HUW76_04760 - electron transfer flavoprotein subunit alpha/FixB family protein, at 959,137 to 960,312
_04760
HUW76_04765: HUW76_04765 - hypothetical protein, at 960,413 to 960,832
_04765
HUW76_04770: HUW76_04770 - YitT family protein, at 960,908 to 961,750
_04770
Position (kb) 959
960
961 Strain fitness (log2 ratio) -1
0
1
2
3 at 958.154 kb on + strand, within HUW76_04750 at 958.154 kb on + strand, within HUW76_04750 at 958.155 kb on + strand, within HUW76_04750 at 958.322 kb on + strand at 958.327 kb on + strand at 958.327 kb on + strand at 958.335 kb on - strand at 958.470 kb on + strand, within HUW76_04755 at 958.518 kb on + strand, within HUW76_04755 at 958.561 kb on + strand, within HUW76_04755 at 958.568 kb on + strand, within HUW76_04755 at 958.696 kb on + strand, within HUW76_04755 at 958.725 kb on + strand, within HUW76_04755 at 958.727 kb on + strand, within HUW76_04755 at 958.735 kb on + strand, within HUW76_04755 at 958.744 kb on + strand, within HUW76_04755 at 958.812 kb on + strand, within HUW76_04755 at 958.840 kb on + strand, within HUW76_04755 at 958.897 kb on + strand, within HUW76_04755 at 958.897 kb on + strand, within HUW76_04755 at 958.939 kb on + strand, within HUW76_04755 at 958.949 kb on + strand, within HUW76_04755 at 959.020 kb on + strand, within HUW76_04755 at 959.317 kb on + strand, within HUW76_04760 at 959.317 kb on + strand, within HUW76_04760 at 959.317 kb on + strand, within HUW76_04760 at 959.317 kb on + strand, within HUW76_04760 at 959.317 kb on + strand, within HUW76_04760 at 959.327 kb on + strand, within HUW76_04760 at 959.327 kb on + strand, within HUW76_04760 at 959.327 kb on + strand, within HUW76_04760 at 959.384 kb on + strand, within HUW76_04760 at 959.505 kb on + strand, within HUW76_04760 at 959.505 kb on + strand, within HUW76_04760 at 959.505 kb on + strand, within HUW76_04760 at 959.505 kb on + strand, within HUW76_04760 at 959.637 kb on + strand, within HUW76_04760 at 959.753 kb on + strand, within HUW76_04760 at 959.795 kb on + strand, within HUW76_04760 at 959.845 kb on + strand, within HUW76_04760 at 959.845 kb on + strand, within HUW76_04760 at 959.845 kb on + strand, within HUW76_04760 at 960.070 kb on + strand, within HUW76_04760 at 960.148 kb on + strand, within HUW76_04760 at 960.148 kb on + strand, within HUW76_04760 at 960.163 kb on + strand, within HUW76_04760 at 960.163 kb on + strand, within HUW76_04760 at 960.458 kb on - strand, within HUW76_04765 at 960.701 kb on - strand, within HUW76_04765 at 960.701 kb on - strand, within HUW76_04765 at 960.701 kb on - strand, within HUW76_04765 at 960.701 kb on - strand, within HUW76_04765 at 960.845 kb on + strand at 960.868 kb on + strand at 960.868 kb on + strand at 960.929 kb on + strand at 960.931 kb on - strand at 960.931 kb on - strand at 961.029 kb on + strand, within HUW76_04770 at 961.029 kb on + strand, within HUW76_04770 at 961.029 kb on + strand, within HUW76_04770 at 961.029 kb on + strand, within HUW76_04770 at 961.029 kb on + strand, within HUW76_04770 at 961.032 kb on - strand, within HUW76_04770 at 961.037 kb on - strand, within HUW76_04770 at 961.037 kb on - strand, within HUW76_04770 at 961.066 kb on - strand, within HUW76_04770 at 961.066 kb on - strand, within HUW76_04770 at 961.076 kb on + strand, within HUW76_04770 at 961.076 kb on + strand, within HUW76_04770 at 961.084 kb on - strand, within HUW76_04770 at 961.084 kb on - strand, within HUW76_04770 at 961.154 kb on - strand, within HUW76_04770 at 961.154 kb on - strand, within HUW76_04770 at 961.155 kb on + strand, within HUW76_04770 at 961.155 kb on - strand, within HUW76_04770 at 961.174 kb on - strand, within HUW76_04770 at 961.174 kb on - strand, within HUW76_04770 at 961.264 kb on - strand, within HUW76_04770
Per-strain Table
Position Strand Gene LocusTag Fraction Time0_glycerolstock remove 958,154 + HUW76_04750 0.87 +1.6 958,154 + HUW76_04750 0.87 +1.3 958,155 + HUW76_04750 0.87 +2.2 958,322 + +2.2 958,327 + +1.4 958,327 + -0.0 958,335 - +1.2 958,470 + HUW76_04755 0.19 +1.4 958,518 + HUW76_04755 0.25 +3.0 958,561 + HUW76_04755 0.30 +0.0 958,568 + HUW76_04755 0.31 +1.2 958,696 + HUW76_04755 0.47 +2.6 958,725 + HUW76_04755 0.51 +0.4 958,727 + HUW76_04755 0.51 +3.4 958,735 + HUW76_04755 0.52 +1.2 958,744 + HUW76_04755 0.53 +1.6 958,812 + HUW76_04755 0.62 +1.2 958,840 + HUW76_04755 0.66 +2.9 958,897 + HUW76_04755 0.73 +0.9 958,897 + HUW76_04755 0.73 +1.3 958,939 + HUW76_04755 0.78 +1.6 958,949 + HUW76_04755 0.79 -0.2 959,020 + HUW76_04755 0.88 -1.4 959,317 + HUW76_04760 0.15 +1.6 959,317 + HUW76_04760 0.15 +0.6 959,317 + HUW76_04760 0.15 +0.9 959,317 + HUW76_04760 0.15 +1.3 959,317 + HUW76_04760 0.15 +1.6 959,327 + HUW76_04760 0.16 +0.6 959,327 + HUW76_04760 0.16 +1.3 959,327 + HUW76_04760 0.16 +1.1 959,384 + HUW76_04760 0.21 +0.6 959,505 + HUW76_04760 0.31 +1.2 959,505 + HUW76_04760 0.31 +0.5 959,505 + HUW76_04760 0.31 -0.1 959,505 + HUW76_04760 0.31 -0.3 959,637 + HUW76_04760 0.43 +0.0 959,753 + HUW76_04760 0.52 +2.6 959,795 + HUW76_04760 0.56 +0.6 959,845 + HUW76_04760 0.60 +1.6 959,845 + HUW76_04760 0.60 +1.8 959,845 + HUW76_04760 0.60 +3.6 960,070 + HUW76_04760 0.79 +0.3 960,148 + HUW76_04760 0.86 +1.0 960,148 + HUW76_04760 0.86 -0.2 960,163 + HUW76_04760 0.87 -0.2 960,163 + HUW76_04760 0.87 +2.0 960,458 - HUW76_04765 0.11 -0.5 960,701 - HUW76_04765 0.69 -0.3 960,701 - HUW76_04765 0.69 +0.2 960,701 - HUW76_04765 0.69 -0.4 960,701 - HUW76_04765 0.69 -0.4 960,845 + +0.4 960,868 + +1.3 960,868 + +0.2 960,929 + +1.6 960,931 - +0.3 960,931 - -0.5 961,029 + HUW76_04770 0.14 +0.6 961,029 + HUW76_04770 0.14 -0.4 961,029 + HUW76_04770 0.14 +1.3 961,029 + HUW76_04770 0.14 +1.9 961,029 + HUW76_04770 0.14 +1.6 961,032 - HUW76_04770 0.15 -0.4 961,037 - HUW76_04770 0.15 -0.7 961,037 - HUW76_04770 0.15 -0.5 961,066 - HUW76_04770 0.19 -0.0 961,066 - HUW76_04770 0.19 -0.4 961,076 + HUW76_04770 0.20 +0.8 961,076 + HUW76_04770 0.20 +1.1 961,084 - HUW76_04770 0.21 -0.1 961,084 - HUW76_04770 0.21 -0.1 961,154 - HUW76_04770 0.29 -0.1 961,154 - HUW76_04770 0.29 -0.3 961,155 + HUW76_04770 0.29 +2.5 961,155 - HUW76_04770 0.29 +0.1 961,174 - HUW76_04770 0.32 -0.0 961,174 - HUW76_04770 0.32 +0.6 961,264 - HUW76_04770 0.42 -1.1
Or see this region's nucleotide sequence