Experiment: Time0_glycerolstock
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HUW76_00305 and HUW76_00310 overlap by 1 nucleotides HUW76_00310 and HUW76_00315 are separated by 65 nucleotides
HUW76_00305: HUW76_00305 - phage head-tail adapter protein, at 60,555 to 61,478
_00305
HUW76_00310: HUW76_00310 - hypothetical protein, at 61,478 to 61,980
_00310
HUW76_00315: HUW76_00315 - hypothetical protein, at 62,046 to 62,474
_00315
Position (kb) 61
62 Strain fitness (log2 ratio) -2
-1
0
1
2 at 60.520 kb on + strand at 60.535 kb on - strand at 60.563 kb on - strand at 60.563 kb on - strand at 60.588 kb on - strand at 60.588 kb on - strand at 60.809 kb on + strand, within HUW76_00305 at 60.809 kb on + strand, within HUW76_00305 at 60.847 kb on - strand, within HUW76_00305 at 60.847 kb on - strand, within HUW76_00305 at 60.931 kb on + strand, within HUW76_00305 at 60.931 kb on + strand, within HUW76_00305 at 60.931 kb on + strand, within HUW76_00305 at 60.931 kb on + strand, within HUW76_00305 at 61.075 kb on - strand, within HUW76_00305 at 61.075 kb on - strand, within HUW76_00305 at 61.418 kb on + strand at 61.418 kb on + strand at 61.426 kb on - strand at 61.426 kb on - strand at 61.439 kb on + strand at 61.440 kb on - strand at 61.522 kb on + strand at 61.564 kb on + strand, within HUW76_00310 at 61.572 kb on - strand, within HUW76_00310 at 61.630 kb on + strand, within HUW76_00310 at 61.939 kb on + strand at 61.939 kb on + strand at 61.939 kb on + strand at 61.939 kb on + strand at 61.947 kb on - strand at 61.947 kb on - strand at 61.947 kb on - strand at 61.947 kb on - strand at 62.079 kb on + strand at 62.079 kb on + strand at 62.096 kb on + strand, within HUW76_00315 at 62.096 kb on + strand, within HUW76_00315 at 62.259 kb on + strand, within HUW76_00315 at 62.279 kb on + strand, within HUW76_00315 at 62.279 kb on + strand, within HUW76_00315 at 62.285 kb on + strand, within HUW76_00315 at 62.288 kb on - strand, within HUW76_00315 at 62.288 kb on - strand, within HUW76_00315 at 62.409 kb on + strand, within HUW76_00315 at 62.453 kb on + strand at 62.453 kb on + strand at 62.548 kb on - strand at 62.549 kb on + strand at 62.572 kb on + strand at 62.572 kb on + strand at 62.580 kb on - strand at 62.580 kb on - strand at 62.580 kb on - strand at 62.580 kb on - strand at 62.643 kb on + strand at 62.660 kb on + strand at 62.660 kb on + strand at 62.662 kb on + strand at 62.670 kb on - strand at 62.670 kb on - strand at 62.707 kb on - strand at 62.767 kb on + strand at 62.780 kb on - strand at 62.780 kb on - strand at 62.801 kb on + strand at 62.970 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Time0_glycerolstock remove 60,520 + -0.9 60,535 - +0.7 60,563 - +0.4 60,563 - +0.1 60,588 - -0.2 60,588 - -0.1 60,809 + HUW76_00305 0.27 +0.6 60,809 + HUW76_00305 0.27 -0.4 60,847 - HUW76_00305 0.32 +0.3 60,847 - HUW76_00305 0.32 +0.4 60,931 + HUW76_00305 0.41 +0.1 60,931 + HUW76_00305 0.41 -0.1 60,931 + HUW76_00305 0.41 -0.5 60,931 + HUW76_00305 0.41 -0.5 61,075 - HUW76_00305 0.56 +0.7 61,075 - HUW76_00305 0.56 +1.6 61,418 + -0.6 61,418 + +0.2 61,426 - +0.7 61,426 - +2.1 61,439 + -0.1 61,440 - +0.7 61,522 + -0.5 61,564 + HUW76_00310 0.17 -0.5 61,572 - HUW76_00310 0.19 +0.4 61,630 + HUW76_00310 0.30 -0.7 61,939 + +0.3 61,939 + -0.2 61,939 + -2.0 61,939 + -0.4 61,947 - +0.4 61,947 - -0.6 61,947 - -0.1 61,947 - +0.6 62,079 + -0.3 62,079 + +0.3 62,096 + HUW76_00315 0.12 -0.1 62,096 + HUW76_00315 0.12 +0.1 62,259 + HUW76_00315 0.50 -1.2 62,279 + HUW76_00315 0.54 +0.5 62,279 + HUW76_00315 0.54 +0.2 62,285 + HUW76_00315 0.56 -0.1 62,288 - HUW76_00315 0.56 -1.4 62,288 - HUW76_00315 0.56 -0.6 62,409 + HUW76_00315 0.85 -0.1 62,453 + -1.6 62,453 + -0.0 62,548 - +0.1 62,549 + -0.4 62,572 + -0.4 62,572 + -0.1 62,580 - +1.0 62,580 - +0.5 62,580 - -0.4 62,580 - +0.4 62,643 + -1.6 62,660 + +0.9 62,660 + +0.7 62,662 + -0.5 62,670 - +1.0 62,670 - +1.3 62,707 - -0.7 62,767 + -0.1 62,780 - -0.7 62,780 - -0.2 62,801 + -0.4 62,970 + +1.2
Or see this region's nucleotide sequence