Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16490

Experiment: defined media with L-Serine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with L-Serine
3,630,394	+		LRK53_RS16480	0.21	-1.6
3,630,394	+		LRK53_RS16480	0.21	+0.1
3,630,394	+		LRK53_RS16480	0.21	-0.5
3,630,394	+		LRK53_RS16480	0.21	+0.1
3,630,394	+		LRK53_RS16480	0.21	-0.6
3,630,395	-		LRK53_RS16480	0.21	+0.1
3,630,395	-		LRK53_RS16480	0.21	-0.5
3,630,562	+		LRK53_RS16480	0.47	+1.7
3,630,562	+		LRK53_RS16480	0.47	+1.4
3,630,562	+		LRK53_RS16480	0.47	-1.0
3,630,562	+		LRK53_RS16480	0.47	-1.2
3,630,562	+		LRK53_RS16480	0.47	-0.7
3,630,562	+		LRK53_RS16480	0.47	+0.5
3,630,562	+		LRK53_RS16480	0.47	-0.9
3,630,563	-		LRK53_RS16480	0.48	-0.7
3,630,563	-		LRK53_RS16480	0.48	+1.1
3,630,563	-		LRK53_RS16480	0.48	+1.1
3,630,563	-		LRK53_RS16480	0.48	-0.5
3,630,563	-		LRK53_RS16480	0.48	+0.1
3,630,563	-		LRK53_RS16480	0.48	+1.1
3,630,563	-		LRK53_RS16480	0.48	+1.1
3,630,563	-		LRK53_RS16480	0.48	+0.1
3,630,563	-		LRK53_RS16480	0.48	-0.6
3,630,604	+		LRK53_RS16480	0.54	-2.3
3,630,604	+		LRK53_RS16480	0.54	-0.9
3,630,604	+		LRK53_RS16480	0.54	+0.5
3,630,604	+		LRK53_RS16480	0.54	-1.9
3,630,604	+		LRK53_RS16480	0.54	-0.9
3,630,605	-		LRK53_RS16480	0.54	+0.7
3,630,636	+		LRK53_RS16480	0.59	-0.2
3,630,637	-		LRK53_RS16480	0.59	+0.1
3,630,637	-		LRK53_RS16480	0.59	-0.5
3,630,715	+		LRK53_RS16480	0.71	+0.5
3,630,715	+		LRK53_RS16480	0.71	-0.4
3,630,715	+		LRK53_RS16480	0.71	-0.9
3,630,715	+		LRK53_RS16480	0.71	+0.5
3,630,715	+		LRK53_RS16480	0.71	+0.1
3,630,715	+		LRK53_RS16480	0.71	-0.9
3,630,715	+		LRK53_RS16480	0.71	-1.2
3,630,715	+		LRK53_RS16480	0.71	-1.6
3,630,715	+		LRK53_RS16480	0.71	+0.1
3,630,715	+		LRK53_RS16480	0.71	-2.0
3,630,715	+		LRK53_RS16480	0.71	-1.0
3,630,715	+		LRK53_RS16480	0.71	-0.8
3,630,715	+		LRK53_RS16480	0.71	-0.9
3,630,715	+		LRK53_RS16480	0.71	+0.7
3,630,715	+		LRK53_RS16480	0.71	-0.4
3,630,715	+		LRK53_RS16480	0.71	+0.1
3,630,715	+		LRK53_RS16480	0.71	+2.1
3,630,715	+		LRK53_RS16480	0.71	-1.2
3,630,715	+		LRK53_RS16480	0.71	+0.1
3,630,715	+		LRK53_RS16480	0.71	-1.5
3,630,715	+		LRK53_RS16480	0.71	-2.2
3,630,715	+		LRK53_RS16480	0.71	-2.2
3,630,715	+		LRK53_RS16480	0.71	-1.5
3,630,715	+		LRK53_RS16480	0.71	-0.9
3,630,715	+		LRK53_RS16480	0.71	-1.5
3,630,715	+		LRK53_RS16480	0.71	+0.1
3,630,715	+		LRK53_RS16480	0.71	-1.2
3,630,715	+		LRK53_RS16480	0.71	-1.2
3,630,715	+		LRK53_RS16480	0.71	-0.5
3,630,715	+		LRK53_RS16480	0.71	-0.7
3,630,715	+		LRK53_RS16480	0.71	+0.1
3,630,715	+		LRK53_RS16480	0.71	-0.5
3,630,715	+		LRK53_RS16480	0.71	-0.7
3,630,715	+		LRK53_RS16480	0.71	-1.9
3,630,715	+		LRK53_RS16480	0.71	-0.6
3,630,716	-		LRK53_RS16480	0.72	-0.5
3,630,716	-		LRK53_RS16480	0.72	+0.1
3,630,716	-		LRK53_RS16480	0.72	+1.1
3,630,716	-		LRK53_RS16480	0.72	+0.1
3,630,716	-		LRK53_RS16480	0.72	+0.1
3,630,716	-		LRK53_RS16480	0.72	-0.2
3,630,716	-		LRK53_RS16480	0.72	+0.1
3,630,716	-		LRK53_RS16480	0.72	-0.5
3,630,716	-		LRK53_RS16480	0.72	+0.5
3,630,716	-		LRK53_RS16480	0.72	+0.1
3,630,716	-		LRK53_RS16480	0.72	+0.1
3,630,716	-		LRK53_RS16480	0.72	-1.2
3,630,716	-		LRK53_RS16480	0.72	+0.2
3,630,716	-		LRK53_RS16480	0.72	+0.7
3,630,716	-		LRK53_RS16480	0.72	-1.0
3,630,716	-		LRK53_RS16480	0.72	-1.0
3,630,716	-		LRK53_RS16480	0.72	+1.1
3,630,716	-		LRK53_RS16480	0.72	-0.4
3,630,716	-		LRK53_RS16480	0.72	-0.8
3,630,716	-		LRK53_RS16480	0.72	+2.1
3,630,716	-		LRK53_RS16480	0.72	+2.7
3,630,716	-		LRK53_RS16480	0.72	-1.2
3,630,716	-		LRK53_RS16480	0.72	-1.3
3,630,716	-		LRK53_RS16480	0.72	-0.5
3,630,716	-		LRK53_RS16480	0.72	+0.1
3,630,716	-		LRK53_RS16480	0.72	+0.1
3,630,716	-		LRK53_RS16480	0.72	-0.5
3,630,716	-		LRK53_RS16480	0.72	+2.1
3,630,716	-		LRK53_RS16480	0.72	-0.2
3,630,716	-		LRK53_RS16480	0.72	-0.9
3,630,716	-		LRK53_RS16480	0.72	-0.5
3,630,716	-		LRK53_RS16480	0.72	+1.7
3,630,716	-		LRK53_RS16480	0.72	+2.1
3,630,716	-		LRK53_RS16480	0.72	+1.1
3,630,716	-		LRK53_RS16480	0.72	-1.5
3,630,716	-		LRK53_RS16480	0.72	-1.0
3,630,716	-		LRK53_RS16480	0.72	-0.6
3,630,716	-		LRK53_RS16480	0.72	+1.1
3,630,716	-		LRK53_RS16480	0.72	-0.1
3,630,716	-		LRK53_RS16480	0.72	-1.7
3,630,716	-		LRK53_RS16480	0.72	-1.1
3,630,751	+		LRK53_RS16480	0.77	-2.0
3,630,751	+		LRK53_RS16480	0.77	-0.2
3,630,752	-		LRK53_RS16480	0.77	+0.1
3,630,932	+		LRK53_RS16485	0.11	+0.1
3,630,932	+		LRK53_RS16485	0.11	-0.9
3,630,932	+		LRK53_RS16485	0.11	-0.5
3,630,932	+		LRK53_RS16485	0.11	-0.5
3,630,932	+		LRK53_RS16485	0.11	-0.8
3,630,932	+		LRK53_RS16485	0.11	+0.1
3,630,933	-		LRK53_RS16485	0.11	+0.1
3,630,933	-		LRK53_RS16485	0.11	-0.3
3,630,962	+		LRK53_RS16485	0.22	+0.1
3,630,962	+		LRK53_RS16485	0.22	-0.7
3,630,962	+		LRK53_RS16485	0.22	+1.1
3,630,962	+		LRK53_RS16485	0.22	-1.2
3,630,963	-		LRK53_RS16485	0.22	-1.5
3,630,963	-		LRK53_RS16485	0.22	+1.1
3,630,963	-		LRK53_RS16485	0.22	-0.1
3,631,176	-				-1.1
3,631,176	-				-2.2
3,631,176	-				-1.5
3,631,457	+				-1.5
3,631,457	+				-2.5
3,631,457	+				-0.9
3,631,457	+				-3.0
3,631,457	+				-1.2
3,631,457	+				-1.9
3,631,457	+				-1.9
3,631,457	+				-3.3
3,631,457	+				-1.7
3,631,457	+				-3.4
3,631,457	+				-2.8
3,631,457	+				-3.2
3,631,457	+				-1.5
3,631,457	+				-2.2
3,631,457	+				-1.7
3,631,457	+				-1.3
3,631,457	+				-0.9
3,631,457	+				-2.5
3,631,457	+				-1.2
3,631,457	+				-1.7
3,631,457	+				-1.2
3,631,458	-				-2.0
3,631,458	-				-3.0
3,631,458	-				-5.4
3,631,458	-				-3.2
3,631,458	-				-0.5
3,631,458	-				-2.0
3,631,458	-				-4.2
3,631,458	-				-0.5
3,631,458	-				-2.5
3,631,458	-				-2.6
3,631,458	-				-2.3
3,631,458	-				-2.2
3,631,458	-				-2.9
3,631,458	-				-0.6
3,631,458	-				+1.1
3,631,458	-				-1.5
3,631,458	-				-3.8
3,631,458	-				-2.0
3,631,458	-				-0.9
3,631,458	-				+0.1
3,631,458	-				-1.2
3,631,458	-				-2.5
3,631,458	-				-2.3
3,631,458	-				-3.4
3,631,764	-		LRK53_RS16490	0.16	-0.5
3,631,916	+		LRK53_RS16490	0.22	-2.3
3,631,916	+		LRK53_RS16490	0.22	-0.9
3,631,916	+		LRK53_RS16490	0.22	-2.2
3,631,916	+		LRK53_RS16490	0.22	-1.2
3,631,917	-		LRK53_RS16490	0.22	-2.0
3,631,917	-		LRK53_RS16490	0.22	-3.5
3,631,917	-		LRK53_RS16490	0.22	+0.1
3,631,917	-		LRK53_RS16490	0.22	-0.9
3,631,917	-		LRK53_RS16490	0.22	-0.2
3,631,952	+		LRK53_RS16490	0.23	+0.1
3,631,953	-		LRK53_RS16490	0.23	-3.5
3,631,953	-		LRK53_RS16490	0.23	-4.2
3,632,099	+		LRK53_RS16490	0.29	-2.8
3,632,099	+		LRK53_RS16490	0.29	-5.5
3,632,099	+		LRK53_RS16490	0.29	-0.9
3,632,099	+		LRK53_RS16490	0.29	-0.9
3,632,099	+		LRK53_RS16490	0.29	-0.9
3,632,100	-		LRK53_RS16490	0.29	+0.1
3,632,100	-		LRK53_RS16490	0.29	-0.5
3,632,100	-		LRK53_RS16490	0.29	-0.5
3,632,100	-		LRK53_RS16490	0.29	-2.8
3,632,100	-		LRK53_RS16490	0.29	-3.5
3,632,340	-		LRK53_RS16490	0.38	+1.1
3,632,340	-		LRK53_RS16490	0.38	-4.0
3,632,391	-		LRK53_RS16490	0.40	-1.2
3,632,479	+		LRK53_RS16490	0.43	-1.2
3,632,479	+		LRK53_RS16490	0.43	-4.7
3,632,479	+		LRK53_RS16490	0.43	-1.5
3,632,480	-		LRK53_RS16490	0.43	-1.2
3,632,480	-		LRK53_RS16490	0.43	-2.6
3,632,480	-		LRK53_RS16490	0.43	-4.6
3,632,480	-		LRK53_RS16490	0.43	-0.5
3,632,570	+		LRK53_RS16490	0.46	-0.9
3,632,570	+		LRK53_RS16490	0.46	-2.0
3,632,570	+		LRK53_RS16490	0.46	-4.1
3,632,570	+		LRK53_RS16490	0.46	-2.0
3,632,570	+		LRK53_RS16490	0.46	-2.6
3,632,570	+		LRK53_RS16490	0.46	-1.2
3,632,570	+		LRK53_RS16490	0.46	-3.0
3,632,570	+		LRK53_RS16490	0.46	-2.9
3,632,570	+		LRK53_RS16490	0.46	-0.9
3,632,570	+		LRK53_RS16490	0.46	-1.9
3,632,570	+		LRK53_RS16490	0.46	-1.5
3,632,570	+		LRK53_RS16490	0.46	-1.5
3,632,570	+		LRK53_RS16490	0.46	-2.7
3,632,570	+		LRK53_RS16490	0.46	-1.2
3,632,570	+		LRK53_RS16490	0.46	-0.5
3,632,570	+		LRK53_RS16490	0.46	+0.1
3,632,570	+		LRK53_RS16490	0.46	-2.5
3,632,570	+		LRK53_RS16490	0.46	-1.2
3,632,570	+		LRK53_RS16490	0.46	+0.1
3,632,570	+		LRK53_RS16490	0.46	-4.0
3,632,570	+		LRK53_RS16490	0.46	+0.1
3,632,571	-		LRK53_RS16490	0.46	-3.1
3,632,571	-		LRK53_RS16490	0.46	-1.7
3,632,571	-		LRK53_RS16490	0.46	+1.1
3,632,571	-		LRK53_RS16490	0.46	-0.5
3,632,571	-		LRK53_RS16490	0.46	+1.1
3,632,571	-		LRK53_RS16490	0.46	-1.2
3,632,571	-		LRK53_RS16490	0.46	-5.5
3,632,571	-		LRK53_RS16490	0.46	+1.1
3,632,571	-		LRK53_RS16490	0.46	-3.0
3,632,571	-		LRK53_RS16490	0.46	-1.7
3,632,571	-		LRK53_RS16490	0.46	-2.8
3,632,571	-		LRK53_RS16490	0.46	-2.0
3,632,571	-		LRK53_RS16490	0.46	-1.7
3,632,571	-		LRK53_RS16490	0.46	-4.5
3,632,571	-		LRK53_RS16490	0.46	-6.0
3,632,571	-		LRK53_RS16490	0.46	-5.4
3,632,571	-		LRK53_RS16490	0.46	-3.0
3,632,571	-		LRK53_RS16490	0.46	+0.1
3,632,571	-		LRK53_RS16490	0.46	+1.1
3,632,571	-		LRK53_RS16490	0.46	-1.5
3,632,571	-		LRK53_RS16490	0.46	-0.9
3,632,571	-		LRK53_RS16490	0.46	-2.7
3,632,942	+		LRK53_RS16490	0.60	-2.3
3,632,943	-		LRK53_RS16490	0.60	-3.6
3,632,943	-		LRK53_RS16490	0.60	-3.3
3,633,299	+		LRK53_RS16490	0.73	-1.2
3,633,299	+		LRK53_RS16490	0.73	-1.7
3,633,299	+		LRK53_RS16490	0.73	-3.5
3,633,299	+		LRK53_RS16490	0.73	-1.9
3,633,299	+		LRK53_RS16490	0.73	+0.1
3,633,299	+		LRK53_RS16490	0.73	-2.5
3,633,300	-		LRK53_RS16490	0.73	-1.2
3,633,300	-		LRK53_RS16490	0.73	-1.5
3,633,300	-		LRK53_RS16490	0.73	+0.1
3,633,300	-		LRK53_RS16490	0.73	-1.5
3,633,300	-		LRK53_RS16490	0.73	+1.1
3,633,300	-		LRK53_RS16490	0.73	-1.5
3,633,300	-		LRK53_RS16490	0.73	+1.1
3,633,300	-		LRK53_RS16490	0.73	-5.3
3,633,300	-		LRK53_RS16490	0.73	-2.0
3,633,300	-		LRK53_RS16490	0.73	-2.0
3,633,332	+		LRK53_RS16490	0.74	-1.2
3,633,332	+		LRK53_RS16490	0.74	-1.2
3,633,332	+		LRK53_RS16490	0.74	-2.2
3,633,332	+		LRK53_RS16490	0.74	-0.5
3,633,332	+		LRK53_RS16490	0.74	-0.9
3,633,333	-		LRK53_RS16490	0.74	-0.5
3,633,333	-		LRK53_RS16490	0.74	-0.5
3,633,333	-		LRK53_RS16490	0.74	-1.7
3,633,333	-		LRK53_RS16490	0.74	-2.6
3,633,333	-		LRK53_RS16490	0.74	-2.5
3,633,354	-		LRK53_RS16490	0.75	-1.5
3,633,371	+		LRK53_RS16490	0.76	-1.9
3,633,371	+		LRK53_RS16490	0.76	-3.9
3,633,371	+		LRK53_RS16490	0.76	-2.0
3,633,372	-		LRK53_RS16490	0.76	-0.9
3,633,372	-		LRK53_RS16490	0.76	-2.9
3,633,372	-		LRK53_RS16490	0.76	-1.5
3,633,458	+		LRK53_RS16490	0.79	-2.9
3,633,458	+		LRK53_RS16490	0.79	-1.9
3,633,458	+		LRK53_RS16490	0.79	-0.9
3,633,458	+		LRK53_RS16490	0.79	-1.7
3,633,458	+		LRK53_RS16490	0.79	-1.9
3,633,458	+		LRK53_RS16490	0.79	-0.5
3,633,458	+		LRK53_RS16490	0.79	-2.3
3,633,458	+		LRK53_RS16490	0.79	-2.6
3,633,458	+		LRK53_RS16490	0.79	-1.7
3,633,458	+		LRK53_RS16490	0.79	-0.5
3,633,458	+		LRK53_RS16490	0.79	-0.9
3,633,458	+		LRK53_RS16490	0.79	-1.5
3,633,458	+		LRK53_RS16490	0.79	+0.1
3,633,458	+		LRK53_RS16490	0.79	-2.5
3,633,458	+		LRK53_RS16490	0.79	+0.1
3,633,458	+		LRK53_RS16490	0.79	-2.7
3,633,458	+		LRK53_RS16490	0.79	-1.2
3,633,458	+		LRK53_RS16490	0.79	-1.9
3,633,459	-		LRK53_RS16490	0.79	-3.6
3,633,459	-		LRK53_RS16490	0.79	-1.7
3,633,459	-		LRK53_RS16490	0.79	-2.0
3,633,459	-		LRK53_RS16490	0.79	-0.9
3,633,459	-		LRK53_RS16490	0.79	-1.2
3,633,459	-		LRK53_RS16490	0.79	-1.2
3,633,459	-		LRK53_RS16490	0.79	-1.5
3,633,459	-		LRK53_RS16490	0.79	-2.7
3,633,459	-		LRK53_RS16490	0.79	-0.5
3,633,459	-		LRK53_RS16490	0.79	-3.2
3,633,459	-		LRK53_RS16490	0.79	-4.9
3,633,459	-		LRK53_RS16490	0.79	-0.5
3,633,459	-		LRK53_RS16490	0.79	-2.0
3,633,459	-		LRK53_RS16490	0.79	-1.5
3,633,459	-		LRK53_RS16490	0.79	-1.5
3,633,459	-		LRK53_RS16490	0.79	+0.1
3,633,459	-		LRK53_RS16490	0.79	-2.7
3,633,459	-		LRK53_RS16490	0.79	-3.3
3,633,459	-		LRK53_RS16490	0.79	-2.3
3,633,459	-		LRK53_RS16490	0.79	-3.6
3,633,459	-		LRK53_RS16490	0.79	-1.5
3,633,459	-		LRK53_RS16490	0.79	-1.2
3,633,459	-		LRK53_RS16490	0.79	+1.1
3,633,459	-		LRK53_RS16490	0.79	+0.1
3,633,459	-		LRK53_RS16490	0.79	-2.2
3,633,459	-		LRK53_RS16490	0.79	-1.2
3,633,459	-		LRK53_RS16490	0.79	-0.9
3,633,459	-		LRK53_RS16490	0.79	-3.1
3,633,716	+		LRK53_RS16490	0.89	-2.2
3,633,717	-		LRK53_RS16490	0.89	-1.7
3,633,773	+				+0.1
3,633,773	+				-1.9
3,633,773	+				-3.3
3,633,773	+				+0.1
3,633,773	+				-2.6
3,633,773	+				-2.0
3,633,773	+				-4.5
3,633,773	+				-3.0
3,633,773	+				-1.2
3,633,773	+				-1.2
3,633,774	-				-0.9
3,633,774	-				-2.7
3,633,774	-				-2.9
3,633,774	-				-1.2
3,633,774	-				-1.2
3,633,774	-				-1.7
3,633,774	-				-3.8
3,634,061	-				-1.7
3,634,061	-				-1.5
3,634,061	-				-1.2
3,634,099	+				-1.0
3,634,099	+				-1.7
3,634,099	+				+1.1
3,634,099	+				-1.1
3,634,099	+				-0.8
3,634,099	+				+0.3
3,634,099	+				-1.6
3,634,099	+				+0.3
3,634,100	-				+1.1
3,634,100	-				-2.2
3,634,100	-				+0.1
3,634,100	-				-1.0
3,634,100	-				+0.7
3,634,100	-				+1.1
3,634,100	-				-0.9
3,634,107	+				-1.7
3,634,107	+				-0.6
3,634,107	+				-0.3
3,634,107	+				-2.1
3,634,107	+				-1.0
3,634,107	+				-2.2
3,634,107	+				-0.2
3,634,107	+				+0.1
3,634,107	+				-0.7
3,634,107	+				-1.5
3,634,107	+				-1.4
3,634,107	+				-0.2
3,634,107	+				-1.5
3,634,107	+				-0.9
3,634,108	-				-1.2
3,634,108	-				+1.1
3,634,108	-				-0.1
3,634,108	-				-0.9
3,634,108	-				-0.5
3,634,108	-				+1.1
3,634,108	-				+0.7
3,634,108	-				+1.1
3,634,117	+				+0.4
3,634,117	+				+1.7
3,634,118	-				+1.7
3,634,118	-				+0.1
3,634,234	+				-2.0
3,634,234	+				+0.0
3,634,234	+				+1.1
3,634,234	+				-0.5
3,634,234	+				+0.1
3,634,234	+				-0.7
3,634,235	-				+0.3
3,634,235	-				-1.7
3,634,235	-				+0.1
3,634,235	-				-0.5
3,634,235	-				-0.5
3,634,235	-				-1.7
3,634,235	-				-0.9
3,634,235	-				+1.1
3,634,235	-				-0.7
3,634,235	-				+1.1
3,634,235	-				-2.0
3,634,298	-				-0.9
3,634,308	+				-0.5
3,634,309	-				-0.9
3,634,309	-				-1.2
3,634,346	+				+1.1
3,634,346	+				+0.1
3,634,346	+				-1.2
3,634,346	+				+1.1
3,634,347	-				+1.1
3,634,347	-				+0.1
3,634,442	+				+1.1
3,634,443	-				+0.1
3,634,443	-				+0.5
3,634,443	-				-0.5
3,634,656	-		LRK53_RS16495	0.24	-0.5
3,634,944	-		LRK53_RS16495	0.44	+1.1