Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16315

Experiment: defined media with L-Serine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with L-Serine
3,591,382	+		LRK53_RS16305	0.77	+0.2
3,591,382	+		LRK53_RS16305	0.77	-1.5
3,591,382	+		LRK53_RS16305	0.77	+0.1
3,591,383	-		LRK53_RS16305	0.78	-0.1
3,591,383	-		LRK53_RS16305	0.78	-0.5
3,591,572	-		LRK53_RS16305	0.87	-1.2
3,591,572	-		LRK53_RS16305	0.87	-1.9
3,591,604	+		LRK53_RS16305	0.89	-0.1
3,591,604	+		LRK53_RS16305	0.89	-0.5
3,591,604	+		LRK53_RS16305	0.89	-1.5
3,591,604	+		LRK53_RS16305	0.89	-1.4
3,591,604	+		LRK53_RS16305	0.89	-0.2
3,591,604	+		LRK53_RS16305	0.89	-1.2
3,591,604	+		LRK53_RS16305	0.89	-0.9
3,591,604	+		LRK53_RS16305	0.89	+0.1
3,591,604	+		LRK53_RS16305	0.89	-0.4
3,591,604	+		LRK53_RS16305	0.89	-0.5
3,591,604	+		LRK53_RS16305	0.89	-0.9
3,591,604	+		LRK53_RS16305	0.89	-0.2
3,591,604	+		LRK53_RS16305	0.89	-0.9
3,591,604	+		LRK53_RS16305	0.89	-1.5
3,591,605	-		LRK53_RS16305	0.89	-1.5
3,591,605	-		LRK53_RS16305	0.89	-0.7
3,591,605	-		LRK53_RS16305	0.89	-0.9
3,591,605	-		LRK53_RS16305	0.89	-2.6
3,591,605	-		LRK53_RS16305	0.89	-0.9
3,591,605	-		LRK53_RS16305	0.89	-0.7
3,591,605	-		LRK53_RS16305	0.89	+1.1
3,591,605	-		LRK53_RS16305	0.89	-1.3
3,591,605	-		LRK53_RS16305	0.89	-0.5
3,591,605	-		LRK53_RS16305	0.89	+1.7
3,591,653	+				+1.1
3,591,654	-				+0.1
3,591,897	+		LRK53_RS16310	0.23	-1.1
3,591,897	+		LRK53_RS16310	0.23	+0.1
3,591,897	+		LRK53_RS16310	0.23	-0.6
3,591,897	+		LRK53_RS16310	0.23	-1.7
3,591,897	+		LRK53_RS16310	0.23	-0.1
3,591,897	+		LRK53_RS16310	0.23	+0.7
3,591,897	+		LRK53_RS16310	0.23	-0.5
3,591,897	+		LRK53_RS16310	0.23	+0.1
3,591,897	+		LRK53_RS16310	0.23	+0.1
3,591,897	+		LRK53_RS16310	0.23	+1.1
3,591,897	+		LRK53_RS16310	0.23	+1.1
3,591,897	+		LRK53_RS16310	0.23	+0.1
3,591,897	+		LRK53_RS16310	0.23	+0.1
3,591,898	-		LRK53_RS16310	0.23	+0.5
3,591,898	-		LRK53_RS16310	0.23	+0.1
3,591,898	-		LRK53_RS16310	0.23	-1.2
3,591,898	-		LRK53_RS16310	0.23	+0.1
3,591,898	-		LRK53_RS16310	0.23	-1.7
3,591,898	-		LRK53_RS16310	0.23	+0.5
3,591,898	-		LRK53_RS16310	0.23	+1.1
3,591,898	-		LRK53_RS16310	0.23	-1.9
3,591,898	-		LRK53_RS16310	0.23	-2.5
3,591,898	-		LRK53_RS16310	0.23	+0.1
3,591,898	-		LRK53_RS16310	0.23	-0.6
3,591,898	-		LRK53_RS16310	0.23	-1.2
3,591,898	-		LRK53_RS16310	0.23	+0.1
3,592,110	+		LRK53_RS16310	0.82	+0.5
3,592,219	+				-1.8
3,592,219	+				+0.1
3,592,219	+				-1.7
3,592,219	+				-0.5
3,592,219	+				-0.9
3,592,219	+				+0.6
3,592,219	+				-0.9
3,592,219	+				-0.2
3,592,219	+				-1.2
3,592,220	-				+0.1
3,592,220	-				-0.4
3,592,220	-				+0.5
3,592,220	-				+0.1
3,592,220	-				-0.7
3,592,220	-				-1.9
3,592,220	-				-0.9
3,592,220	-				-0.6
3,592,339	+				-1.7
3,592,401	-		LRK53_RS16315	0.12	-1.6
3,592,699	+		LRK53_RS16315	0.34	+1.1
3,592,699	+		LRK53_RS16315	0.34	-1.2
3,592,700	-		LRK53_RS16315	0.34	-0.5
3,592,700	-		LRK53_RS16315	0.34	-1.6
3,592,721	+		LRK53_RS16315	0.36	-1.2
3,592,721	+		LRK53_RS16315	0.36	-0.3
3,592,721	+		LRK53_RS16315	0.36	-0.5
3,592,721	+		LRK53_RS16315	0.36	+0.5
3,592,721	+		LRK53_RS16315	0.36	-1.3
3,592,721	+		LRK53_RS16315	0.36	-1.6
3,592,721	+		LRK53_RS16315	0.36	+1.1
3,592,721	+		LRK53_RS16315	0.36	-1.1
3,592,721	+		LRK53_RS16315	0.36	-3.2
3,592,722	-		LRK53_RS16315	0.36	-1.2
3,592,722	-		LRK53_RS16315	0.36	-0.9
3,592,722	-		LRK53_RS16315	0.36	+1.1
3,592,722	-		LRK53_RS16315	0.36	-1.6
3,592,722	-		LRK53_RS16315	0.36	-2.7
3,592,722	-		LRK53_RS16315	0.36	-2.1
3,592,722	-		LRK53_RS16315	0.36	-0.5
3,592,798	+		LRK53_RS16315	0.41	-0.5
3,592,909	+		LRK53_RS16315	0.49	+2.1
3,592,910	-		LRK53_RS16315	0.49	-1.2
3,592,922	+		LRK53_RS16315	0.50	-0.9
3,593,093	+		LRK53_RS16315	0.63	-2.5
3,593,093	+		LRK53_RS16315	0.63	-1.5
3,593,094	-		LRK53_RS16315	0.63	+0.1
3,593,747	+		LRK53_RS16320	0.13	+0.1
3,593,747	+		LRK53_RS16320	0.13	-1.5
3,593,747	+		LRK53_RS16320	0.13	+0.1
3,593,747	+		LRK53_RS16320	0.13	+0.1
3,593,747	+		LRK53_RS16320	0.13	-0.5
3,593,747	+		LRK53_RS16320	0.13	-0.3
3,593,747	+		LRK53_RS16320	0.13	-0.5
3,593,747	+		LRK53_RS16320	0.13	-0.2
3,593,748	-		LRK53_RS16320	0.13	-0.9
3,593,748	-		LRK53_RS16320	0.13	-0.1
3,593,748	-		LRK53_RS16320	0.13	+1.1
3,593,748	-		LRK53_RS16320	0.13	+1.1
3,593,748	-		LRK53_RS16320	0.13	-1.6
3,593,748	-		LRK53_RS16320	0.13	+0.1
3,593,925	+		LRK53_RS16320	0.41	+0.5
3,593,925	+		LRK53_RS16320	0.41	+0.5
3,593,926	-		LRK53_RS16320	0.41	-0.4
3,593,926	-		LRK53_RS16320	0.41	-0.7
3,593,926	-		LRK53_RS16320	0.41	-2.1
3,594,085	-		LRK53_RS16320	0.66	-0.5
3,594,085	-		LRK53_RS16320	0.66	-0.8
3,594,094	+		LRK53_RS16320	0.68	-1.7
3,594,094	+		LRK53_RS16320	0.68	+0.1
3,594,094	+		LRK53_RS16320	0.68	-1.2
3,594,094	+		LRK53_RS16320	0.68	-0.9
3,594,094	+		LRK53_RS16320	0.68	+0.1
3,594,094	+		LRK53_RS16320	0.68	-0.1
3,594,094	+		LRK53_RS16320	0.68	+0.3
3,594,095	-		LRK53_RS16320	0.68	+0.1
3,594,095	-		LRK53_RS16320	0.68	-0.1
3,594,095	-		LRK53_RS16320	0.68	-1.5
3,594,095	-		LRK53_RS16320	0.68	-1.5
3,594,095	-		LRK53_RS16320	0.68	-2.2
3,594,215	-		LRK53_RS16320	0.87	-0.9
3,594,337	+				+2.7
3,594,338	-				-0.9
3,594,338	-				-0.5
3,594,424	-				-1.4
3,594,424	-				-1.2
3,594,428	+				+0.5
3,594,428	+				-0.3
3,594,428	+				+0.1
3,594,428	+				-0.6
3,594,429	-				-0.2
3,594,429	-				+2.1
3,594,429	-				-0.5
3,594,429	-				+0.3
3,594,445	+				+0.1
3,594,445	+				-0.7
3,594,445	+				-1.7
3,594,445	+				-1.2
3,594,445	+				-1.5
3,594,445	+				-0.2
3,594,445	+				-0.9
3,594,445	+				-0.7
3,594,445	+				-0.3
3,594,445	+				-1.7
3,594,445	+				-1.9
3,594,445	+				-1.2
3,594,445	+				-1.0
3,594,445	+				+0.0
3,594,445	+				+0.5
3,594,445	+				+0.1
3,594,445	+				-0.7
3,594,445	+				-0.9
3,594,446	-				-1.4
3,594,446	-				-1.9
3,594,446	-				+0.5
3,594,446	-				-0.9
3,594,446	-				-0.1
3,594,446	-				-1.4
3,594,446	-				+0.1
3,594,446	-				-0.4
3,594,446	-				+1.7
3,594,446	-				-0.5
3,594,446	-				-0.7
3,594,446	-				-0.8
3,594,446	-				-2.1
3,594,446	-				-0.5
3,594,446	-				-0.4
3,594,446	-				-1.4
3,594,446	-				-1.1
3,594,446	-				-1.7
3,594,446	-				+0.2
3,594,446	-				+0.7
3,594,446	-				-0.7
3,594,446	-				-0.6
3,594,446	-				+1.4
3,594,448	+				-0.6
3,594,448	+				+0.1
3,594,448	+				+0.3
3,594,448	+				-1.2
3,594,448	+				-0.3
3,594,448	+				-0.8
3,594,448	+				-0.9
3,594,448	+				+0.5
3,594,448	+				+0.0
3,594,448	+				-0.4
3,594,448	+				+0.1
3,594,448	+				-1.1
3,594,448	+				-1.4
3,594,448	+				-0.2
3,594,448	+				-0.9
3,594,448	+				-0.9
3,594,448	+				-0.3
3,594,448	+				-0.2
3,594,448	+				-1.7
3,594,448	+				-1.7
3,594,448	+				+0.0
3,594,448	+				-0.9
3,594,448	+				+0.1
3,594,448	+				-1.1
3,594,448	+				+0.1
3,594,448	+				-0.9
3,594,448	+				-0.5
3,594,448	+				+0.1
3,594,448	+				+1.4
3,594,448	+				-0.9
3,594,448	+				-1.0
3,594,448	+				-2.2
3,594,448	+				-1.9
3,594,448	+				-3.5
3,594,448	+				-1.1
3,594,448	+				+0.1
3,594,448	+				-0.8
3,594,448	+				-0.5
3,594,448	+				-0.9
3,594,448	+				-1.1
3,594,448	+				-0.7
3,594,448	+				-1.2
3,594,448	+				-0.2
3,594,448	+				-1.8
3,594,449	-				-0.4
3,594,449	-				-1.2
3,594,449	-				-0.5
3,594,449	-				-1.1
3,594,449	-				-2.3
3,594,449	-				-0.8
3,594,449	-				+0.1
3,594,449	-				+0.1
3,594,449	-				-0.3
3,594,449	-				-0.1
3,594,449	-				-1.0
3,594,449	-				-0.4
3,594,449	-				-0.1
3,594,449	-				-1.4
3,594,449	-				-1.3
3,594,449	-				-0.9
3,594,449	-				-0.3
3,594,449	-				-1.7
3,594,449	-				+0.1
3,594,449	-				+0.1
3,594,449	-				-0.9
3,594,449	-				-3.1
3,594,449	-				-1.8
3,594,449	-				+0.4
3,594,449	-				-1.2
3,594,449	-				-0.9
3,594,449	-				-2.2
3,594,449	-				-0.5
3,594,449	-				-0.5
3,594,449	-				-1.9
3,594,449	-				-0.0
3,594,449	-				-0.4
3,594,449	-				-1.3
3,594,449	-				-0.7
3,594,449	-				-1.4
3,594,449	-				-2.4
3,594,449	-				-1.1
3,594,449	-				-0.2
3,594,449	-				-1.2
3,594,449	-				-1.0