Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS11165

Experiment: defined media with L-Serine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntLRK53_RS11160 and LRK53_RS11165 are separated by 87 nucleotidesLRK53_RS11165 and LRK53_RS11170 are separated by 90 nucleotides LRK53_RS11160: LRK53_RS11160 - IMP dehydrogenase, at 2,490,409 to 2,491,866 _RS11160 LRK53_RS11165: LRK53_RS11165 - bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD, at 2,491,954 to 2,492,823 _RS11165 LRK53_RS11170: LRK53_RS11170 - ribosome biogenesis GTPase Der, at 2,492,914 to 2,494,317 _RS11170 Position (kb) 2491 2492 2493Strain fitness (log2 ratio) -2 -1 0 1at 2491.898 kb on - strandat 2491.898 kb on - strandat 2492.886 kb on + strandat 2492.886 kb on + strandat 2492.887 kb on - strandat 2492.887 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction defined media with L-Serine
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2,491,898 - +0.8
2,491,898 - +0.1
2,492,886 + -1.2
2,492,886 + -0.8
2,492,887 - -1.8
2,492,887 - -0.0

Or see this region's nucleotide sequence