Experiment: R2A_PIPES no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK53_RS14325 and LRK53_RS14330 are separated by 10 nucleotides LRK53_RS14330 and LRK53_RS14335 are separated by 14 nucleotides LRK53_RS14335 and LRK53_RS14340 are separated by 70 nucleotides
LRK53_RS14325: LRK53_RS14325 - ABC transporter permease, at 3,143,060 to 3,143,893
_RS14325
LRK53_RS14330: LRK53_RS14330 - nitrous oxide reductase accessory protein NosL, at 3,143,904 to 3,144,566
_RS14330
LRK53_RS14335: LRK53_RS14335 - twin-arginine translocase TatA/TatE family subunit, at 3,144,581 to 3,144,784
_RS14335
LRK53_RS14340: LRK53_RS14340 - succinyl-diaminopimelate desuccinylase, at 3,144,855 to 3,145,994
_RS14340
Position (kb)
3144
3145 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3143.687 kb on + strand, within LRK53_RS14325 at 3143.687 kb on + strand, within LRK53_RS14325 at 3143.687 kb on + strand, within LRK53_RS14325 at 3143.687 kb on + strand, within LRK53_RS14325 at 3143.687 kb on + strand, within LRK53_RS14325 at 3143.687 kb on + strand, within LRK53_RS14325 at 3143.687 kb on + strand, within LRK53_RS14325 at 3143.688 kb on - strand, within LRK53_RS14325 at 3143.693 kb on + strand, within LRK53_RS14325 at 3143.693 kb on + strand, within LRK53_RS14325 at 3143.693 kb on + strand, within LRK53_RS14325 at 3143.694 kb on - strand, within LRK53_RS14325 at 3143.694 kb on - strand, within LRK53_RS14325 at 3143.772 kb on + strand, within LRK53_RS14325 at 3143.772 kb on + strand, within LRK53_RS14325 at 3143.772 kb on + strand, within LRK53_RS14325 at 3143.772 kb on + strand, within LRK53_RS14325 at 3143.772 kb on + strand, within LRK53_RS14325 at 3143.772 kb on + strand, within LRK53_RS14325 at 3143.773 kb on - strand, within LRK53_RS14325 at 3143.773 kb on - strand, within LRK53_RS14325 at 3143.773 kb on - strand, within LRK53_RS14325 at 3143.773 kb on - strand, within LRK53_RS14325 at 3143.773 kb on - strand, within LRK53_RS14325 at 3143.773 kb on - strand, within LRK53_RS14325 at 3143.773 kb on - strand, within LRK53_RS14325 at 3143.773 kb on - strand, within LRK53_RS14325 at 3143.801 kb on + strand, within LRK53_RS14325 at 3144.051 kb on + strand, within LRK53_RS14330 at 3144.051 kb on + strand, within LRK53_RS14330 at 3144.051 kb on + strand, within LRK53_RS14330 at 3144.051 kb on + strand, within LRK53_RS14330 at 3144.051 kb on + strand, within LRK53_RS14330 at 3144.051 kb on + strand, within LRK53_RS14330 at 3144.051 kb on + strand, within LRK53_RS14330 at 3144.051 kb on + strand, within LRK53_RS14330 at 3144.051 kb on + strand, within LRK53_RS14330 at 3144.051 kb on + strand, within LRK53_RS14330 at 3144.051 kb on + strand, within LRK53_RS14330 at 3144.051 kb on + strand, within LRK53_RS14330 at 3144.051 kb on + strand, within LRK53_RS14330 at 3144.051 kb on + strand, within LRK53_RS14330 at 3144.051 kb on + strand, within LRK53_RS14330 at 3144.051 kb on + strand, within LRK53_RS14330 at 3144.051 kb on + strand, within LRK53_RS14330 at 3144.051 kb on + strand, within LRK53_RS14330 at 3144.051 kb on + strand, within LRK53_RS14330 at 3144.051 kb on + strand, within LRK53_RS14330 at 3144.052 kb on - strand, within LRK53_RS14330 at 3144.052 kb on - strand, within LRK53_RS14330 at 3144.052 kb on - strand, within LRK53_RS14330 at 3144.052 kb on - strand, within LRK53_RS14330 at 3144.052 kb on - strand, within LRK53_RS14330 at 3144.052 kb on - strand, within LRK53_RS14330 at 3144.052 kb on - strand, within LRK53_RS14330 at 3144.052 kb on - strand, within LRK53_RS14330 at 3144.052 kb on - strand, within LRK53_RS14330 at 3144.052 kb on - strand, within LRK53_RS14330 at 3144.052 kb on - strand, within LRK53_RS14330 at 3144.052 kb on - strand, within LRK53_RS14330 at 3144.052 kb on - strand, within LRK53_RS14330 at 3144.052 kb on - strand, within LRK53_RS14330 at 3144.144 kb on + strand, within LRK53_RS14330 at 3144.144 kb on + strand, within LRK53_RS14330 at 3144.144 kb on + strand, within LRK53_RS14330 at 3144.144 kb on + strand, within LRK53_RS14330 at 3144.144 kb on + strand, within LRK53_RS14330 at 3144.145 kb on - strand, within LRK53_RS14330 at 3144.145 kb on - strand, within LRK53_RS14330 at 3144.145 kb on - strand, within LRK53_RS14330 at 3144.186 kb on + strand, within LRK53_RS14330 at 3144.186 kb on + strand, within LRK53_RS14330 at 3144.186 kb on + strand, within LRK53_RS14330 at 3144.186 kb on + strand, within LRK53_RS14330 at 3144.186 kb on + strand, within LRK53_RS14330 at 3144.186 kb on + strand, within LRK53_RS14330 at 3144.186 kb on + strand, within LRK53_RS14330 at 3144.186 kb on + strand, within LRK53_RS14330 at 3144.186 kb on + strand, within LRK53_RS14330 at 3144.187 kb on - strand, within LRK53_RS14330 at 3144.187 kb on - strand, within LRK53_RS14330 at 3144.187 kb on - strand, within LRK53_RS14330 at 3144.187 kb on - strand, within LRK53_RS14330 at 3144.187 kb on - strand, within LRK53_RS14330 at 3144.187 kb on - strand, within LRK53_RS14330 at 3144.187 kb on - strand, within LRK53_RS14330 at 3144.187 kb on - strand, within LRK53_RS14330 at 3144.187 kb on - strand, within LRK53_RS14330 at 3144.187 kb on - strand, within LRK53_RS14330 at 3144.187 kb on - strand, within LRK53_RS14330 at 3144.187 kb on - strand, within LRK53_RS14330 at 3144.187 kb on - strand, within LRK53_RS14330 at 3144.187 kb on - strand, within LRK53_RS14330 at 3144.187 kb on - strand, within LRK53_RS14330 at 3144.187 kb on - strand, within LRK53_RS14330 at 3144.187 kb on - strand, within LRK53_RS14330 at 3144.187 kb on - strand, within LRK53_RS14330 at 3144.187 kb on - strand, within LRK53_RS14330 at 3144.267 kb on + strand, within LRK53_RS14330 at 3144.267 kb on + strand, within LRK53_RS14330 at 3144.267 kb on + strand, within LRK53_RS14330 at 3144.267 kb on + strand, within LRK53_RS14330 at 3144.268 kb on - strand, within LRK53_RS14330 at 3144.268 kb on - strand, within LRK53_RS14330 at 3144.268 kb on - strand, within LRK53_RS14330 at 3144.268 kb on - strand, within LRK53_RS14330 at 3144.268 kb on - strand, within LRK53_RS14330 at 3144.268 kb on - strand, within LRK53_RS14330 at 3144.268 kb on - strand, within LRK53_RS14330 at 3144.268 kb on - strand, within LRK53_RS14330 at 3144.268 kb on - strand, within LRK53_RS14330 at 3144.268 kb on - strand, within LRK53_RS14330 at 3144.418 kb on - strand, within LRK53_RS14330 at 3144.624 kb on + strand, within LRK53_RS14335 at 3144.630 kb on + strand, within LRK53_RS14335 at 3144.630 kb on + strand, within LRK53_RS14335 at 3144.630 kb on + strand, within LRK53_RS14335 at 3144.630 kb on + strand, within LRK53_RS14335 at 3144.630 kb on + strand, within LRK53_RS14335 at 3144.630 kb on + strand, within LRK53_RS14335 at 3144.630 kb on + strand, within LRK53_RS14335 at 3144.630 kb on + strand, within LRK53_RS14335 at 3144.630 kb on + strand, within LRK53_RS14335 at 3144.630 kb on + strand, within LRK53_RS14335 at 3144.630 kb on + strand, within LRK53_RS14335 at 3144.631 kb on - strand, within LRK53_RS14335 at 3144.631 kb on - strand, within LRK53_RS14335 at 3144.631 kb on - strand, within LRK53_RS14335 at 3144.631 kb on - strand, within LRK53_RS14335
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES no stress control remove 3,143,687 + LRK53_RS14325 0.75 -0.6 3,143,687 + LRK53_RS14325 0.75 -1.1 3,143,687 + LRK53_RS14325 0.75 -0.1 3,143,687 + LRK53_RS14325 0.75 +0.4 3,143,687 + LRK53_RS14325 0.75 -2.1 3,143,687 + LRK53_RS14325 0.75 -2.1 3,143,687 + LRK53_RS14325 0.75 -0.1 3,143,688 - LRK53_RS14325 0.75 +0.4 3,143,693 + LRK53_RS14325 0.76 -0.9 3,143,693 + LRK53_RS14325 0.76 -2.0 3,143,693 + LRK53_RS14325 0.76 -1.1 3,143,694 - LRK53_RS14325 0.76 -0.1 3,143,694 - LRK53_RS14325 0.76 -0.2 3,143,772 + LRK53_RS14325 0.85 -0.4 3,143,772 + LRK53_RS14325 0.85 -1.1 3,143,772 + LRK53_RS14325 0.85 -1.4 3,143,772 + LRK53_RS14325 0.85 -0.6 3,143,772 + LRK53_RS14325 0.85 -2.8 3,143,772 + LRK53_RS14325 0.85 -0.6 3,143,773 - LRK53_RS14325 0.85 +0.9 3,143,773 - LRK53_RS14325 0.85 -1.1 3,143,773 - LRK53_RS14325 0.85 +0.5 3,143,773 - LRK53_RS14325 0.85 -1.6 3,143,773 - LRK53_RS14325 0.85 +0.9 3,143,773 - LRK53_RS14325 0.85 -1.3 3,143,773 - LRK53_RS14325 0.85 -1.1 3,143,773 - LRK53_RS14325 0.85 -1.2 3,143,801 + LRK53_RS14325 0.89 -3.1 3,144,051 + LRK53_RS14330 0.22 -1.4 3,144,051 + LRK53_RS14330 0.22 +0.5 3,144,051 + LRK53_RS14330 0.22 -1.6 3,144,051 + LRK53_RS14330 0.22 -1.9 3,144,051 + LRK53_RS14330 0.22 -0.1 3,144,051 + LRK53_RS14330 0.22 -0.9 3,144,051 + LRK53_RS14330 0.22 -0.2 3,144,051 + LRK53_RS14330 0.22 -0.3 3,144,051 + LRK53_RS14330 0.22 -2.4 3,144,051 + LRK53_RS14330 0.22 -0.3 3,144,051 + LRK53_RS14330 0.22 -0.6 3,144,051 + LRK53_RS14330 0.22 -0.4 3,144,051 + LRK53_RS14330 0.22 -0.6 3,144,051 + LRK53_RS14330 0.22 -1.5 3,144,051 + LRK53_RS14330 0.22 -0.9 3,144,051 + LRK53_RS14330 0.22 +0.4 3,144,051 + LRK53_RS14330 0.22 -1.5 3,144,051 + LRK53_RS14330 0.22 -0.1 3,144,051 + LRK53_RS14330 0.22 -1.1 3,144,051 + LRK53_RS14330 0.22 -0.3 3,144,052 - LRK53_RS14330 0.22 -2.2 3,144,052 - LRK53_RS14330 0.22 -1.1 3,144,052 - LRK53_RS14330 0.22 +0.4 3,144,052 - LRK53_RS14330 0.22 -0.1 3,144,052 - LRK53_RS14330 0.22 -2.1 3,144,052 - LRK53_RS14330 0.22 -0.3 3,144,052 - LRK53_RS14330 0.22 -0.6 3,144,052 - LRK53_RS14330 0.22 -0.1 3,144,052 - LRK53_RS14330 0.22 -2.1 3,144,052 - LRK53_RS14330 0.22 -1.1 3,144,052 - LRK53_RS14330 0.22 +2.5 3,144,052 - LRK53_RS14330 0.22 -2.1 3,144,052 - LRK53_RS14330 0.22 -1.1 3,144,052 - LRK53_RS14330 0.22 +0.0 3,144,144 + LRK53_RS14330 0.36 -0.1 3,144,144 + LRK53_RS14330 0.36 -2.1 3,144,144 + LRK53_RS14330 0.36 -0.8 3,144,144 + LRK53_RS14330 0.36 -1.3 3,144,144 + LRK53_RS14330 0.36 +0.9 3,144,145 - LRK53_RS14330 0.36 -1.1 3,144,145 - LRK53_RS14330 0.36 -1.0 3,144,145 - LRK53_RS14330 0.36 -0.6 3,144,186 + LRK53_RS14330 0.43 +0.9 3,144,186 + LRK53_RS14330 0.43 -2.1 3,144,186 + LRK53_RS14330 0.43 +0.6 3,144,186 + LRK53_RS14330 0.43 +1.4 3,144,186 + LRK53_RS14330 0.43 -0.1 3,144,186 + LRK53_RS14330 0.43 -1.6 3,144,186 + LRK53_RS14330 0.43 -0.4 3,144,186 + LRK53_RS14330 0.43 -1.1 3,144,186 + LRK53_RS14330 0.43 +0.2 3,144,187 - LRK53_RS14330 0.43 +0.2 3,144,187 - LRK53_RS14330 0.43 -0.1 3,144,187 - LRK53_RS14330 0.43 -0.3 3,144,187 - LRK53_RS14330 0.43 -1.6 3,144,187 - LRK53_RS14330 0.43 +1.9 3,144,187 - LRK53_RS14330 0.43 -0.1 3,144,187 - LRK53_RS14330 0.43 -2.1 3,144,187 - LRK53_RS14330 0.43 +1.5 3,144,187 - LRK53_RS14330 0.43 -1.1 3,144,187 - LRK53_RS14330 0.43 -1.3 3,144,187 - LRK53_RS14330 0.43 +1.9 3,144,187 - LRK53_RS14330 0.43 -0.9 3,144,187 - LRK53_RS14330 0.43 -1.5 3,144,187 - LRK53_RS14330 0.43 -0.6 3,144,187 - LRK53_RS14330 0.43 -0.6 3,144,187 - LRK53_RS14330 0.43 -0.6 3,144,187 - LRK53_RS14330 0.43 -0.8 3,144,187 - LRK53_RS14330 0.43 +0.5 3,144,187 - LRK53_RS14330 0.43 -0.5 3,144,267 + LRK53_RS14330 0.55 -0.4 3,144,267 + LRK53_RS14330 0.55 +0.9 3,144,267 + LRK53_RS14330 0.55 -2.1 3,144,267 + LRK53_RS14330 0.55 +1.9 3,144,268 - LRK53_RS14330 0.55 +0.4 3,144,268 - LRK53_RS14330 0.55 -1.6 3,144,268 - LRK53_RS14330 0.55 -1.9 3,144,268 - LRK53_RS14330 0.55 -0.1 3,144,268 - LRK53_RS14330 0.55 -0.1 3,144,268 - LRK53_RS14330 0.55 -0.4 3,144,268 - LRK53_RS14330 0.55 -0.6 3,144,268 - LRK53_RS14330 0.55 +0.2 3,144,268 - LRK53_RS14330 0.55 -0.1 3,144,268 - LRK53_RS14330 0.55 -2.5 3,144,418 - LRK53_RS14330 0.78 -2.2 3,144,624 + LRK53_RS14335 0.21 +0.5 3,144,630 + LRK53_RS14335 0.24 -1.3 3,144,630 + LRK53_RS14335 0.24 -2.6 3,144,630 + LRK53_RS14335 0.24 -0.6 3,144,630 + LRK53_RS14335 0.24 -1.9 3,144,630 + LRK53_RS14335 0.24 -0.1 3,144,630 + LRK53_RS14335 0.24 -2.1 3,144,630 + LRK53_RS14335 0.24 -0.9 3,144,630 + LRK53_RS14335 0.24 -0.4 3,144,630 + LRK53_RS14335 0.24 -0.6 3,144,630 + LRK53_RS14335 0.24 -0.8 3,144,630 + LRK53_RS14335 0.24 +0.5 3,144,631 - LRK53_RS14335 0.25 -2.1 3,144,631 - LRK53_RS14335 0.25 -0.6 3,144,631 - LRK53_RS14335 0.25 -0.1 3,144,631 - LRK53_RS14335 0.25 -1.4
Or see this region's nucleotide sequence