Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13420

Experiment: R2A_PIPES no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES no stress control
2,962,710	-				-2.8
2,962,710	-				-0.1
2,963,075	+		LRK53_RS13415	0.52	+0.3
2,963,075	+		LRK53_RS13415	0.52	-0.2
2,963,076	-		LRK53_RS13415	0.52	-1.2
2,963,187	-		LRK53_RS13415	0.69	-1.1
2,963,428	+				-0.7
2,963,428	+				-1.9
2,963,428	+				+0.3
2,963,428	+				+1.9
2,963,429	-				-0.4
2,963,429	-				+0.5
2,963,429	-				+0.9
2,963,435	+				-0.2
2,963,435	+				-0.9
2,963,435	+				+0.5
2,963,435	+				+0.3
2,963,435	+				+0.5
2,963,435	+				+0.7
2,963,436	-				+0.9
2,963,436	-				+0.2
2,963,436	-				-0.7
2,963,436	-				-0.7
2,963,436	-				+0.3
2,963,436	-				-0.4
2,963,436	-				-0.9
2,963,436	-				-0.3
2,963,436	-				-1.7
2,963,475	+				-0.7
2,963,475	+				-2.0
2,963,476	-				-1.1
2,963,476	-				+0.3
2,963,476	-				-0.1
2,963,476	-				+0.9
2,963,496	+				-1.0
2,963,496	+				-0.1
2,963,496	+				+0.2
2,963,496	+				-0.2
2,963,496	+				-1.2
2,963,496	+				+1.9
2,963,496	+				+0.4
2,963,496	+				+0.9
2,963,496	+				-0.5
2,963,496	+				-1.4
2,963,496	+				-0.3
2,963,496	+				-1.5
2,963,496	+				-1.1
2,963,497	-				+0.5
2,963,497	-				-0.1
2,963,497	-				+0.3
2,963,497	-				-0.0
2,963,497	-				+0.3
2,963,497	-				-2.0
2,963,497	-				-0.3
2,963,497	-				-0.7
2,963,497	-				+0.9
2,963,497	-				-0.1
2,963,497	-				-1.2
2,963,497	-				-0.4
2,963,497	-				+0.7
2,963,497	-				-0.4
2,963,497	-				-2.5
2,963,498	+				-1.4
2,963,498	+				-0.1
2,963,498	+				-0.6
2,963,498	+				+0.1
2,963,498	+				-0.1
2,963,498	+				+0.3
2,963,498	+				-0.1
2,963,498	+				-1.4
2,963,591	-				+0.9
2,963,664	+				-1.1
2,963,664	+				-0.1
2,963,664	+				+0.3
2,963,665	-				-0.4
2,963,707	-				+0.5
2,963,841	+		LRK53_RS13420	0.11	-1.2
2,963,841	+		LRK53_RS13420	0.11	-1.1
2,963,841	+		LRK53_RS13420	0.11	-1.1
2,963,841	+		LRK53_RS13420	0.11	-2.0
2,963,841	+		LRK53_RS13420	0.11	-0.1
2,963,841	+		LRK53_RS13420	0.11	-0.7
2,963,841	+		LRK53_RS13420	0.11	-0.1
2,963,841	+		LRK53_RS13420	0.11	-0.7
2,963,841	+		LRK53_RS13420	0.11	-0.1
2,963,841	+		LRK53_RS13420	0.11	-0.1
2,963,841	+		LRK53_RS13420	0.11	-0.1
2,963,842	-		LRK53_RS13420	0.11	+0.9
2,963,842	-		LRK53_RS13420	0.11	+2.5
2,963,842	-		LRK53_RS13420	0.11	-1.1
2,963,842	-		LRK53_RS13420	0.11	-0.1
2,963,842	-		LRK53_RS13420	0.11	-2.2
2,963,847	+		LRK53_RS13420	0.11	-0.4
2,963,848	-		LRK53_RS13420	0.11	-1.7
2,963,848	-		LRK53_RS13420	0.11	+0.9
2,963,848	-		LRK53_RS13420	0.11	-0.1
2,963,848	-		LRK53_RS13420	0.11	-0.1
2,963,862	+		LRK53_RS13420	0.11	-1.4
2,963,863	-		LRK53_RS13420	0.11	+0.9
2,963,863	-		LRK53_RS13420	0.11	-0.7
2,963,970	+		LRK53_RS13420	0.15	-0.1
2,963,970	+		LRK53_RS13420	0.15	-0.4
2,963,970	+		LRK53_RS13420	0.15	+0.9
2,963,970	+		LRK53_RS13420	0.15	+1.9
2,963,970	+		LRK53_RS13420	0.15	-0.1
2,963,970	+		LRK53_RS13420	0.15	+0.9
2,963,970	+		LRK53_RS13420	0.15	-0.7
2,963,970	+		LRK53_RS13420	0.15	-0.1
2,963,971	-		LRK53_RS13420	0.15	-1.1
2,964,078	+		LRK53_RS13420	0.19	-1.2
2,964,078	+		LRK53_RS13420	0.19	-0.1
2,964,078	+		LRK53_RS13420	0.19	+0.9
2,964,078	+		LRK53_RS13420	0.19	-0.1
2,964,079	-		LRK53_RS13420	0.19	-0.1
2,964,079	-		LRK53_RS13420	0.19	+0.2
2,964,079	-		LRK53_RS13420	0.19	-0.7
2,964,301	-		LRK53_RS13420	0.26	-1.1
2,964,301	-		LRK53_RS13420	0.26	+0.9
2,964,477	+		LRK53_RS13420	0.32	-0.1
2,964,477	+		LRK53_RS13420	0.32	-0.1
2,964,477	+		LRK53_RS13420	0.32	-0.7
2,964,477	+		LRK53_RS13420	0.32	-0.1
2,964,478	-		LRK53_RS13420	0.32	-0.1
2,964,510	+		LRK53_RS13420	0.33	+0.9
2,964,573	+		LRK53_RS13420	0.36	+0.5
2,964,607	-		LRK53_RS13420	0.37	-0.1
2,964,681	+		LRK53_RS13420	0.39	-1.3
2,964,682	-		LRK53_RS13420	0.39	-0.1
2,964,682	-		LRK53_RS13420	0.39	+0.9
2,964,726	+		LRK53_RS13420	0.41	-1.8
2,964,726	+		LRK53_RS13420	0.41	-2.1
2,964,726	+		LRK53_RS13420	0.41	-0.1
2,964,726	+		LRK53_RS13420	0.41	+0.2
2,964,726	+		LRK53_RS13420	0.41	+0.3
2,964,726	+		LRK53_RS13420	0.41	-0.7
2,964,726	+		LRK53_RS13420	0.41	-0.1
2,964,726	+		LRK53_RS13420	0.41	+0.3
2,964,727	-		LRK53_RS13420	0.41	-1.1
2,964,727	-		LRK53_RS13420	0.41	-1.4
2,964,727	-		LRK53_RS13420	0.41	-2.8
2,964,727	-		LRK53_RS13420	0.41	-2.1
2,964,727	-		LRK53_RS13420	0.41	-0.1
2,964,929	+		LRK53_RS13420	0.48	+1.9
2,964,930	-		LRK53_RS13420	0.48	+0.9
2,964,957	+		LRK53_RS13420	0.49	+0.3
2,964,957	+		LRK53_RS13420	0.49	+0.1
2,964,958	-		LRK53_RS13420	0.49	-1.5
2,964,958	-		LRK53_RS13420	0.49	-1.4
2,964,958	-		LRK53_RS13420	0.49	-0.1
2,964,958	-		LRK53_RS13420	0.49	+0.9
2,965,056	+		LRK53_RS13420	0.52	-0.1
2,965,056	+		LRK53_RS13420	0.52	-0.7
2,965,056	+		LRK53_RS13420	0.52	+0.9
2,965,056	+		LRK53_RS13420	0.52	-0.7
2,965,056	+		LRK53_RS13420	0.52	-3.2
2,965,056	+		LRK53_RS13420	0.52	-0.1
2,965,056	+		LRK53_RS13420	0.52	-1.4
2,965,056	+		LRK53_RS13420	0.52	-1.4
2,965,056	+		LRK53_RS13420	0.52	-1.5
2,965,056	+		LRK53_RS13420	0.52	+0.3
2,965,056	+		LRK53_RS13420	0.52	+0.9
2,965,056	+		LRK53_RS13420	0.52	-2.2
2,965,056	+		LRK53_RS13420	0.52	+0.9
2,965,057	-		LRK53_RS13420	0.52	-1.9
2,965,057	-		LRK53_RS13420	0.52	+0.9
2,965,057	-		LRK53_RS13420	0.52	-1.1
2,965,057	-		LRK53_RS13420	0.52	-0.4
2,965,057	-		LRK53_RS13420	0.52	+0.3
2,965,545	+		LRK53_RS13420	0.69	-1.1
2,965,546	-		LRK53_RS13420	0.69	+0.9
2,965,546	-		LRK53_RS13420	0.69	-0.1
2,965,638	+		LRK53_RS13420	0.72	-1.4
2,965,639	-		LRK53_RS13420	0.72	-0.1
2,965,639	-		LRK53_RS13420	0.72	-0.1
2,965,639	-		LRK53_RS13420	0.72	+0.9
2,965,639	-		LRK53_RS13420	0.72	-0.7
2,965,639	-		LRK53_RS13420	0.72	-2.2
2,965,639	-		LRK53_RS13420	0.72	-1.4
2,965,639	-		LRK53_RS13420	0.72	-1.7
2,965,639	-		LRK53_RS13420	0.72	-0.4
2,965,639	-		LRK53_RS13420	0.72	+0.9
2,965,704	+		LRK53_RS13420	0.74	-0.1
2,965,732	+		LRK53_RS13420	0.75	-0.1
2,965,733	-		LRK53_RS13420	0.75	-1.9
2,965,733	-		LRK53_RS13420	0.75	-1.1
2,965,733	-		LRK53_RS13420	0.75	-0.1
2,965,806	+		LRK53_RS13420	0.78	-0.3
2,965,806	+		LRK53_RS13420	0.78	+0.9
2,965,806	+		LRK53_RS13420	0.78	-0.1
2,965,806	+		LRK53_RS13420	0.78	-1.1
2,965,806	+		LRK53_RS13420	0.78	-0.7
2,965,807	-		LRK53_RS13420	0.78	-0.3
2,965,807	-		LRK53_RS13420	0.78	+0.9
2,965,839	+		LRK53_RS13420	0.79	-0.7
2,965,839	+		LRK53_RS13420	0.79	-0.1
2,965,866	+		LRK53_RS13420	0.80	+0.3
2,965,866	+		LRK53_RS13420	0.80	-1.7
2,965,867	-		LRK53_RS13420	0.80	+0.7
2,965,867	-		LRK53_RS13420	0.80	+0.9
2,965,986	+		LRK53_RS13420	0.84	-2.1
2,965,986	+		LRK53_RS13420	0.84	-0.1
2,965,986	+		LRK53_RS13420	0.84	-1.7
2,965,986	+		LRK53_RS13420	0.84	-0.5
2,965,987	-		LRK53_RS13420	0.84	-2.2
2,966,088	+		LRK53_RS13420	0.87	+0.3
2,966,088	+		LRK53_RS13420	0.87	+0.2
2,966,088	+		LRK53_RS13420	0.87	-0.1
2,966,088	+		LRK53_RS13420	0.87	-1.1
2,966,088	+		LRK53_RS13420	0.87	-3.0
2,966,088	+		LRK53_RS13420	0.87	-0.7
2,966,088	+		LRK53_RS13420	0.87	+0.9
2,966,088	+		LRK53_RS13420	0.87	-1.8
2,966,088	+		LRK53_RS13420	0.87	+0.9
2,966,088	+		LRK53_RS13420	0.87	-0.3
2,966,088	+		LRK53_RS13420	0.87	-0.5
2,966,088	+		LRK53_RS13420	0.87	+0.9
2,966,088	+		LRK53_RS13420	0.87	-1.8
2,966,089	-		LRK53_RS13420	0.87	-0.7
2,966,089	-		LRK53_RS13420	0.87	-1.1
2,966,089	-		LRK53_RS13420	0.87	-1.4
2,966,089	-		LRK53_RS13420	0.87	-1.1
2,966,089	-		LRK53_RS13420	0.87	-1.4
2,966,089	-		LRK53_RS13420	0.87	-1.4
2,966,089	-		LRK53_RS13420	0.87	-2.1
2,966,089	-		LRK53_RS13420	0.87	-0.1
2,966,089	-		LRK53_RS13420	0.87	+0.3
2,966,089	-		LRK53_RS13420	0.87	-0.1
2,966,089	-		LRK53_RS13420	0.87	-0.3
2,966,427	+				-0.4
2,966,427	+				+0.3
2,966,427	+				-1.7
2,966,427	+				+0.5
2,966,427	+				-1.9
2,966,427	+				-2.4
2,966,427	+				-1.9
2,966,427	+				-0.9
2,966,427	+				+0.9
2,966,427	+				+0.8
2,966,427	+				-0.3
2,966,427	+				-0.1
2,966,428	-				-1.1
2,966,428	-				-2.0
2,966,428	-				-1.9
2,966,428	-				-1.0
2,966,428	-				-0.4
2,966,428	-				-0.4
2,966,428	-				-2.0
2,966,428	-				-1.9
2,966,428	-				-0.9
2,966,428	-				-0.1
2,966,428	-				+1.9
2,966,428	-				-1.9
2,966,428	-				-0.7
2,966,428	-				-2.2
2,966,428	-				-0.5
2,966,428	-				-1.4
2,966,428	-				-0.4
2,966,428	-				-1.6
2,966,428	-				-0.1
2,966,428	-				-0.5
2,966,428	-				+0.9
2,966,594	+		LRK53_RS13425	0.30	-0.9
2,966,594	+		LRK53_RS13425	0.30	-2.7
2,966,594	+		LRK53_RS13425	0.30	-0.3
2,966,594	+		LRK53_RS13425	0.30	-0.2
2,966,594	+		LRK53_RS13425	0.30	-1.9
2,966,594	+		LRK53_RS13425	0.30	-0.7
2,966,594	+		LRK53_RS13425	0.30	-2.1
2,966,594	+		LRK53_RS13425	0.30	-1.1
2,966,595	-		LRK53_RS13425	0.30	-1.4
2,966,595	-		LRK53_RS13425	0.30	-0.1
2,966,595	-		LRK53_RS13425	0.30	-0.1
2,966,595	-		LRK53_RS13425	0.30	-1.4
2,966,595	-		LRK53_RS13425	0.30	-0.1
2,966,595	-		LRK53_RS13425	0.30	-1.2
2,966,603	+		LRK53_RS13425	0.32	-0.7
2,966,603	+		LRK53_RS13425	0.32	-0.1
2,966,603	+		LRK53_RS13425	0.32	-1.0
2,966,603	+		LRK53_RS13425	0.32	-0.1
2,966,604	-		LRK53_RS13425	0.32	-0.3
2,966,604	-		LRK53_RS13425	0.32	-1.7
2,966,604	-		LRK53_RS13425	0.32	-0.7
2,966,604	-		LRK53_RS13425	0.32	+0.1
2,966,699	+		LRK53_RS13425	0.53	-1.6
2,966,699	+		LRK53_RS13425	0.53	-0.7
2,966,699	+		LRK53_RS13425	0.53	+0.5
2,966,700	-		LRK53_RS13425	0.53	+1.9
2,966,819	+		LRK53_RS13425	0.79	-0.8
2,966,819	+		LRK53_RS13425	0.79	-2.1
2,966,819	+		LRK53_RS13425	0.79	+0.9
2,966,819	+		LRK53_RS13425	0.79	-0.4
2,966,819	+		LRK53_RS13425	0.79	-1.2
2,966,819	+		LRK53_RS13425	0.79	-2.4
2,966,820	-		LRK53_RS13425	0.80	-1.7
2,966,820	-		LRK53_RS13425	0.80	-1.2
2,966,820	-		LRK53_RS13425	0.80	+0.9
2,966,820	-		LRK53_RS13425	0.80	-0.1
2,966,820	-		LRK53_RS13425	0.80	-0.4
2,966,820	-		LRK53_RS13425	0.80	-1.1
2,966,997	+				+0.9
2,966,998	-				-0.1
2,967,041	+				+0.1
2,967,041	+				-1.1
2,967,041	+				-0.1
2,967,159	+				-0.4
2,967,159	+				-1.7
2,967,160	-				+0.9
2,967,202	+				-0.9
2,967,203	-				-0.1
2,967,203	-				+0.9
2,967,203	-				+0.9
2,967,238	+		LRK53_RS13430	0.11	-1.6
2,967,239	-		LRK53_RS13430	0.11	-0.9
2,967,239	-		LRK53_RS13430	0.11	-1.4
2,967,239	-		LRK53_RS13430	0.11	-1.7