Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08250

Experiment: R2A_PIPES no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES no stress control
1,855,124	+		LRK53_RS08240	0.51	-2.3
1,855,124	+		LRK53_RS08240	0.51	-0.9
1,855,124	+		LRK53_RS08240	0.51	-1.0
1,855,124	+		LRK53_RS08240	0.51	-0.9
1,855,124	+		LRK53_RS08240	0.51	-1.4
1,855,125	-		LRK53_RS08240	0.51	+0.1
1,855,125	-		LRK53_RS08240	0.51	-0.5
1,855,125	-		LRK53_RS08240	0.51	-0.4
1,855,125	-		LRK53_RS08240	0.51	-0.6
1,855,175	+		LRK53_RS08240	0.60	-0.7
1,855,175	+		LRK53_RS08240	0.60	-1.0
1,855,175	+		LRK53_RS08240	0.60	-0.7
1,855,175	+		LRK53_RS08240	0.60	-1.1
1,855,175	+		LRK53_RS08240	0.60	-0.0
1,855,175	+		LRK53_RS08240	0.60	-1.1
1,855,175	+		LRK53_RS08240	0.60	+1.9
1,855,175	+		LRK53_RS08240	0.60	-0.2
1,855,176	-		LRK53_RS08240	0.60	-1.2
1,855,176	-		LRK53_RS08240	0.60	+0.9
1,855,281	-		LRK53_RS08240	0.79	+0.3
1,855,343	+		LRK53_RS08240	0.89	-1.1
1,855,343	+		LRK53_RS08240	0.89	-0.7
1,855,343	+		LRK53_RS08240	0.89	-0.7
1,855,343	+		LRK53_RS08240	0.89	-1.2
1,855,343	+		LRK53_RS08240	0.89	+1.9
1,855,343	+		LRK53_RS08240	0.89	-0.1
1,855,343	+		LRK53_RS08240	0.89	-0.1
1,855,343	+		LRK53_RS08240	0.89	-0.1
1,855,343	+		LRK53_RS08240	0.89	-0.7
1,855,343	+		LRK53_RS08240	0.89	-1.7
1,855,343	+		LRK53_RS08240	0.89	-1.2
1,855,343	+		LRK53_RS08240	0.89	-1.2
1,855,343	+		LRK53_RS08240	0.89	+0.1
1,855,344	-		LRK53_RS08240	0.90	-2.0
1,855,344	-		LRK53_RS08240	0.90	-0.1
1,855,344	-		LRK53_RS08240	0.90	-0.6
1,855,344	-		LRK53_RS08240	0.90	+0.3
1,855,344	-		LRK53_RS08240	0.90	-0.9
1,855,344	-		LRK53_RS08240	0.90	-0.1
1,855,344	-		LRK53_RS08240	0.90	+0.9
1,855,344	-		LRK53_RS08240	0.90	-0.4
1,855,344	-		LRK53_RS08240	0.90	+0.9
1,855,344	-		LRK53_RS08240	0.90	-1.4
1,855,344	-		LRK53_RS08240	0.90	-0.1
1,855,364	+				-0.1
1,855,364	+				-0.3
1,855,364	+				+0.9
1,855,364	+				-0.7
1,855,364	+				-0.1
1,855,364	+				-0.9
1,855,364	+				+0.3
1,855,364	+				-0.1
1,855,364	+				-1.2
1,855,365	-				+1.9
1,855,365	-				-1.1
1,855,365	-				+0.5
1,855,365	-				+0.4
1,855,365	-				-0.1
1,855,365	-				-0.1
1,855,365	-				-1.4
1,855,365	-				+0.4
1,855,456	+				-1.4
1,855,456	+				+0.5
1,855,456	+				-1.0
1,855,457	-				-1.1
1,855,457	-				+1.9
1,855,587	+		LRK53_RS08245	0.18	-2.4
1,855,587	+		LRK53_RS08245	0.18	-1.4
1,855,648	+		LRK53_RS08245	0.30	-0.7
1,855,648	+		LRK53_RS08245	0.30	-0.7
1,855,648	+		LRK53_RS08245	0.30	+0.9
1,855,648	+		LRK53_RS08245	0.30	+0.9
1,855,648	+		LRK53_RS08245	0.30	-2.1
1,855,648	+		LRK53_RS08245	0.30	-1.3
1,855,648	+		LRK53_RS08245	0.30	-2.1
1,855,648	+		LRK53_RS08245	0.30	+0.9
1,855,648	+		LRK53_RS08245	0.30	+1.1
1,855,649	-		LRK53_RS08245	0.31	-1.4
1,855,649	-		LRK53_RS08245	0.31	+0.9
1,855,649	-		LRK53_RS08245	0.31	+0.5
1,855,649	-		LRK53_RS08245	0.31	-0.7
1,855,649	-		LRK53_RS08245	0.31	+0.2
1,855,650	+		LRK53_RS08245	0.31	-1.9
1,855,650	+		LRK53_RS08245	0.31	-0.2
1,855,650	+		LRK53_RS08245	0.31	-0.5
1,855,650	+		LRK53_RS08245	0.31	-1.1
1,855,650	+		LRK53_RS08245	0.31	+0.3
1,855,650	+		LRK53_RS08245	0.31	+0.1
1,855,650	+		LRK53_RS08245	0.31	-0.5
1,855,650	+		LRK53_RS08245	0.31	-0.9
1,855,650	+		LRK53_RS08245	0.31	-1.1
1,855,650	+		LRK53_RS08245	0.31	-1.3
1,855,650	+		LRK53_RS08245	0.31	-1.4
1,855,651	-		LRK53_RS08245	0.31	-0.1
1,855,651	-		LRK53_RS08245	0.31	-1.1
1,855,651	-		LRK53_RS08245	0.31	+0.3
1,855,651	-		LRK53_RS08245	0.31	-0.4
1,855,651	-		LRK53_RS08245	0.31	-0.1
1,855,651	-		LRK53_RS08245	0.31	-2.6
1,855,651	-		LRK53_RS08245	0.31	+0.5
1,855,651	-		LRK53_RS08245	0.31	-2.6
1,855,651	-		LRK53_RS08245	0.31	-1.3
1,855,651	-		LRK53_RS08245	0.31	-1.6
1,855,651	-		LRK53_RS08245	0.31	-1.0
1,855,651	-		LRK53_RS08245	0.31	-0.4
1,855,683	-		LRK53_RS08245	0.37	+0.9
1,855,801	+		LRK53_RS08245	0.61	-2.3
1,855,801	+		LRK53_RS08245	0.61	-1.0
1,855,801	+		LRK53_RS08245	0.61	-0.8
1,855,801	+		LRK53_RS08245	0.61	-0.1
1,855,801	+		LRK53_RS08245	0.61	-0.6
1,855,801	+		LRK53_RS08245	0.61	+0.3
1,855,801	+		LRK53_RS08245	0.61	-0.1
1,855,801	+		LRK53_RS08245	0.61	+0.3
1,855,801	+		LRK53_RS08245	0.61	+0.1
1,855,801	+		LRK53_RS08245	0.61	-0.1
1,855,801	+		LRK53_RS08245	0.61	-1.3
1,855,801	+		LRK53_RS08245	0.61	+0.9
1,855,801	+		LRK53_RS08245	0.61	+0.9
1,855,801	+		LRK53_RS08245	0.61	-1.7
1,855,801	+		LRK53_RS08245	0.61	-1.7
1,855,801	+		LRK53_RS08245	0.61	-0.1
1,855,801	+		LRK53_RS08245	0.61	-0.1
1,855,801	+		LRK53_RS08245	0.61	-0.7
1,855,801	+		LRK53_RS08245	0.61	-0.7
1,855,801	+		LRK53_RS08245	0.61	-1.4
1,855,801	+		LRK53_RS08245	0.61	+1.5
1,855,801	+		LRK53_RS08245	0.61	+0.9
1,855,801	+		LRK53_RS08245	0.61	-0.1
1,855,801	+		LRK53_RS08245	0.61	-0.1
1,855,802	-		LRK53_RS08245	0.61	-0.7
1,855,802	-		LRK53_RS08245	0.61	+0.9
1,855,802	-		LRK53_RS08245	0.61	-1.1
1,855,802	-		LRK53_RS08245	0.61	-0.1
1,855,802	-		LRK53_RS08245	0.61	+0.9
1,855,802	-		LRK53_RS08245	0.61	-1.1
1,855,802	-		LRK53_RS08245	0.61	-0.1
1,855,802	-		LRK53_RS08245	0.61	-0.9
1,855,802	-		LRK53_RS08245	0.61	+1.9
1,855,802	-		LRK53_RS08245	0.61	-0.1
1,855,802	-		LRK53_RS08245	0.61	-0.1
1,855,802	-		LRK53_RS08245	0.61	-1.5
1,855,802	-		LRK53_RS08245	0.61	-1.4
1,855,802	-		LRK53_RS08245	0.61	-0.1
1,855,802	-		LRK53_RS08245	0.61	-1.9
1,855,802	-		LRK53_RS08245	0.61	-1.1
1,855,802	-		LRK53_RS08245	0.61	+0.3
1,855,802	-		LRK53_RS08245	0.61	-0.7
1,855,802	-		LRK53_RS08245	0.61	-1.1
1,855,802	-		LRK53_RS08245	0.61	-0.7
1,855,802	-		LRK53_RS08245	0.61	-1.3
1,855,825	+		LRK53_RS08245	0.66	-1.4
1,855,825	+		LRK53_RS08245	0.66	-1.1
1,855,826	-		LRK53_RS08245	0.66	-1.1
1,855,840	+		LRK53_RS08245	0.69	-1.4
1,855,840	+		LRK53_RS08245	0.69	-0.1
1,855,840	+		LRK53_RS08245	0.69	-0.1
1,855,840	+		LRK53_RS08245	0.69	-1.7
1,855,840	+		LRK53_RS08245	0.69	+0.9
1,855,840	+		LRK53_RS08245	0.69	-0.7
1,855,841	-		LRK53_RS08245	0.69	-0.7
1,855,841	-		LRK53_RS08245	0.69	-0.7
1,855,841	-		LRK53_RS08245	0.69	-0.2
1,855,841	-		LRK53_RS08245	0.69	+0.1
1,855,841	-		LRK53_RS08245	0.69	+1.9
1,855,841	-		LRK53_RS08245	0.69	-1.1
1,855,841	-		LRK53_RS08245	0.69	-0.4
1,855,841	-		LRK53_RS08245	0.69	-1.4
1,855,841	-		LRK53_RS08245	0.69	-0.7
1,855,843	+		LRK53_RS08245	0.70	+1.9
1,855,843	+		LRK53_RS08245	0.70	-1.1
1,855,843	+		LRK53_RS08245	0.70	-0.7
1,855,843	+		LRK53_RS08245	0.70	-0.7
1,855,843	+		LRK53_RS08245	0.70	-0.7
1,855,843	+		LRK53_RS08245	0.70	-1.1
1,855,843	+		LRK53_RS08245	0.70	-1.9
1,855,843	+		LRK53_RS08245	0.70	-2.1
1,855,844	-		LRK53_RS08245	0.70	+0.3
1,855,844	-		LRK53_RS08245	0.70	+0.9
1,855,844	-		LRK53_RS08245	0.70	-0.5
1,855,844	-		LRK53_RS08245	0.70	-0.4
1,855,844	-		LRK53_RS08245	0.70	-1.9
1,855,844	-		LRK53_RS08245	0.70	+0.9
1,855,844	-		LRK53_RS08245	0.70	-0.1
1,855,844	-		LRK53_RS08245	0.70	-0.1
1,855,844	-		LRK53_RS08245	0.70	-0.9
1,855,844	-		LRK53_RS08245	0.70	-1.9
1,855,844	-		LRK53_RS08245	0.70	-0.1
1,855,885	-		LRK53_RS08245	0.78	-0.9
1,855,909	+		LRK53_RS08245	0.83	-0.1
1,855,969	+				-0.5
1,855,969	+				-0.6
1,855,969	+				-0.7
1,855,969	+				-2.8
1,855,969	+				-1.6
1,855,969	+				-0.4
1,855,969	+				-1.3
1,855,969	+				-1.5
1,855,969	+				-0.4
1,855,969	+				-0.5
1,855,969	+				-0.9
1,855,969	+				+0.9
1,855,969	+				+1.9
1,855,969	+				-1.1
1,855,969	+				-1.9
1,855,970	-				-0.5
1,855,970	-				+0.9
1,855,970	-				-0.9
1,855,970	-				-1.1
1,855,970	-				-1.0
1,855,970	-				+0.3
1,855,970	-				+1.3
1,855,970	-				-0.3
1,855,970	-				-1.3
1,855,970	-				-0.5
1,855,970	-				-1.3
1,855,970	-				-0.1
1,856,433	+		LRK53_RS08250	0.89	-0.1
1,856,433	+		LRK53_RS08250	0.89	-1.6
1,856,433	+		LRK53_RS08250	0.89	-0.1
1,856,433	+		LRK53_RS08250	0.89	-2.3
1,856,434	-		LRK53_RS08250	0.89	-1.0
1,856,458	+				-2.4
1,856,458	+				-2.2
1,856,458	+				-0.5
1,856,458	+				-1.4
1,856,458	+				-0.9
1,856,459	-				-0.2
1,856,459	-				+0.9
1,856,459	-				-0.1
1,856,459	-				-2.6
1,856,459	-				-1.9
1,856,459	-				-0.8
1,856,459	-				-0.1
1,856,548	+		LRK53_RS08255	0.11	-1.7
1,856,549	-		LRK53_RS08255	0.11	-0.9
1,856,549	-		LRK53_RS08255	0.11	-2.6
1,856,549	-		LRK53_RS08255	0.11	+2.9
1,856,590	+		LRK53_RS08255	0.17	-1.8
1,856,590	+		LRK53_RS08255	0.17	+0.5
1,856,591	-		LRK53_RS08255	0.17	-0.6
1,856,591	-		LRK53_RS08255	0.17	-0.4
1,856,591	-		LRK53_RS08255	0.17	+0.6
1,856,731	+		LRK53_RS08255	0.38	-0.7
1,856,732	-		LRK53_RS08255	0.38	-0.7
1,856,734	+		LRK53_RS08255	0.39	-0.7
1,856,734	+		LRK53_RS08255	0.39	-0.7
1,856,734	+		LRK53_RS08255	0.39	-1.2
1,856,734	+		LRK53_RS08255	0.39	-0.8
1,856,734	+		LRK53_RS08255	0.39	+1.9
1,856,734	+		LRK53_RS08255	0.39	+0.9
1,856,734	+		LRK53_RS08255	0.39	-2.3
1,856,735	-		LRK53_RS08255	0.39	-1.4
1,856,735	-		LRK53_RS08255	0.39	-0.4
1,856,735	-		LRK53_RS08255	0.39	-1.1
1,856,735	-		LRK53_RS08255	0.39	+0.0
1,856,735	-		LRK53_RS08255	0.39	-0.1
1,856,735	-		LRK53_RS08255	0.39	-0.1
1,856,735	-		LRK53_RS08255	0.39	-1.2
1,856,923	+		LRK53_RS08255	0.67	-2.1
1,856,923	+		LRK53_RS08255	0.67	-1.1
1,856,924	-		LRK53_RS08255	0.67	+0.9
1,856,924	-		LRK53_RS08255	0.67	-1.2
1,856,924	-		LRK53_RS08255	0.67	-2.1
1,856,924	-		LRK53_RS08255	0.67	-0.7
1,856,980	+		LRK53_RS08255	0.75	-1.0
1,856,980	+		LRK53_RS08255	0.75	-0.5
1,857,092	-				+0.3
1,857,176	+				-2.2
1,857,177	-				+1.9
1,857,177	-				-0.1
1,857,207	+				+2.5
1,857,208	-				+0.9
1,857,208	-				-2.4
1,857,208	-				+1.9
1,857,208	-				-0.3
1,857,208	-				-1.1
1,857,209	+				-0.1
1,857,209	+				-0.7
1,857,209	+				-0.4
1,857,210	-				-1.5
1,857,210	-				-0.7
1,857,221	-				-0.7
1,857,346	+				+0.9
1,857,364	+				-1.4