Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS14810

Experiment: R2A_PIPES no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES no stress control
3,242,700	+		LRK53_RS14805	0.43	-0.5
3,242,700	+		LRK53_RS14805	0.43	-0.9
3,242,700	+		LRK53_RS14805	0.43	-1.6
3,242,700	+		LRK53_RS14805	0.43	+0.5
3,242,701	-		LRK53_RS14805	0.43	+1.0
3,242,701	-		LRK53_RS14805	0.43	+0.5
3,242,781	+		LRK53_RS14805	0.52	-1.0
3,242,781	+		LRK53_RS14805	0.52	-0.9
3,242,781	+		LRK53_RS14805	0.52	-1.4
3,242,781	+		LRK53_RS14805	0.52	-0.9
3,242,781	+		LRK53_RS14805	0.52	-1.0
3,242,781	+		LRK53_RS14805	0.52	+1.0
3,242,781	+		LRK53_RS14805	0.52	+1.0
3,242,781	+		LRK53_RS14805	0.52	+0.4
3,242,782	-		LRK53_RS14805	0.53	-1.8
3,242,826	+		LRK53_RS14805	0.58	-0.5
3,242,826	+		LRK53_RS14805	0.58	+1.0
3,242,826	+		LRK53_RS14805	0.58	-1.2
3,242,826	+		LRK53_RS14805	0.58	+2.0
3,242,826	+		LRK53_RS14805	0.58	-0.0
3,242,826	+		LRK53_RS14805	0.58	-0.5
3,242,827	-		LRK53_RS14805	0.58	-0.0
3,242,827	-		LRK53_RS14805	0.58	-0.3
3,243,096	+		LRK53_RS14805	0.89	-0.0
3,243,096	+		LRK53_RS14805	0.89	-1.4
3,243,096	+		LRK53_RS14805	0.89	-0.0
3,243,096	+		LRK53_RS14805	0.89	-1.2
3,243,097	-		LRK53_RS14805	0.89	+0.2
3,243,097	-		LRK53_RS14805	0.89	-1.6
3,243,392	+				-0.0
3,243,697	+		LRK53_RS14810	0.52	-1.4
3,243,697	+		LRK53_RS14810	0.52	-0.6
3,243,697	+		LRK53_RS14810	0.52	-0.9
3,243,698	-		LRK53_RS14810	0.53	-1.4
3,243,887	+				-1.4
3,243,887	+				-0.6
3,243,887	+				-0.5
3,243,887	+				-2.5
3,243,887	+				+0.4
3,243,887	+				+0.1
3,243,887	+				-1.5
3,243,888	-				-0.8
3,243,888	-				-1.1
3,243,933	+				-0.0
3,243,933	+				+1.0
3,243,933	+				-0.6
3,243,933	+				-1.7
3,243,933	+				-0.9
3,243,933	+				-0.3
3,243,933	+				-0.8
3,243,933	+				-1.6
3,243,933	+				-1.4
3,243,933	+				+1.0
3,243,933	+				-1.4
3,243,933	+				-0.6
3,243,933	+				+1.0
3,243,933	+				-0.2
3,243,933	+				-1.3
3,243,933	+				-0.0
3,243,933	+				-1.4
3,243,933	+				-1.2
3,243,933	+				-0.9
3,243,933	+				-0.0
3,243,933	+				-0.6
3,243,933	+				-1.0
3,243,933	+				+1.0
3,243,933	+				-0.3
3,243,933	+				-1.9
3,243,933	+				+1.0
3,243,934	-				+1.1
3,243,934	-				-1.4
3,243,934	-				-1.7
3,243,934	-				-0.0
3,243,934	-				-1.4
3,243,934	-				-0.8
3,243,934	-				+1.0
3,243,934	-				-1.0
3,243,934	-				+1.6
3,243,934	-				-1.6
3,243,934	-				+1.0
3,243,934	-				-1.8
3,243,934	-				-0.0
3,243,934	-				-2.0
3,243,934	-				-1.0
3,243,934	-				+0.4
3,243,934	-				-1.2
3,243,934	-				-1.9
3,243,934	-				-1.0
3,243,934	-				-0.8
3,243,934	-				-1.2
3,243,934	-				-0.0
3,243,934	-				-1.0
3,244,042	+		LRK53_RS14815	0.24	-1.8
3,244,098	+		LRK53_RS14815	0.36	-1.4
3,244,098	+		LRK53_RS14815	0.36	-1.6
3,244,098	+		LRK53_RS14815	0.36	-1.4
3,244,098	+		LRK53_RS14815	0.36	-0.0
3,244,098	+		LRK53_RS14815	0.36	-0.6
3,244,098	+		LRK53_RS14815	0.36	-1.0
3,244,098	+		LRK53_RS14815	0.36	-0.9
3,244,098	+		LRK53_RS14815	0.36	+0.6
3,244,098	+		LRK53_RS14815	0.36	+1.0
3,244,098	+		LRK53_RS14815	0.36	-1.5
3,244,098	+		LRK53_RS14815	0.36	+0.1
3,244,099	-		LRK53_RS14815	0.37	-1.0
3,244,099	-		LRK53_RS14815	0.37	-1.4
3,244,099	-		LRK53_RS14815	0.37	-1.4
3,244,099	-		LRK53_RS14815	0.37	-1.3
3,244,099	-		LRK53_RS14815	0.37	-0.3
3,244,099	-		LRK53_RS14815	0.37	-1.7
3,244,099	-		LRK53_RS14815	0.37	-1.4
3,244,293	+		LRK53_RS14815	0.79	-0.6
3,244,293	+		LRK53_RS14815	0.79	-0.8
3,244,293	+		LRK53_RS14815	0.79	-0.6
3,244,293	+		LRK53_RS14815	0.79	+2.6
3,244,293	+		LRK53_RS14815	0.79	-0.9
3,244,293	+		LRK53_RS14815	0.79	-0.0
3,244,293	+		LRK53_RS14815	0.79	-1.8
3,244,293	+		LRK53_RS14815	0.79	-1.8
3,244,294	-		LRK53_RS14815	0.79	-1.7
3,244,294	-		LRK53_RS14815	0.79	-1.0
3,244,294	-		LRK53_RS14815	0.79	-0.8
3,244,294	-		LRK53_RS14815	0.79	-1.0
3,244,294	-		LRK53_RS14815	0.79	-0.6
3,244,294	-		LRK53_RS14815	0.79	-1.8
3,244,294	-		LRK53_RS14815	0.79	-0.2
3,244,294	-		LRK53_RS14815	0.79	-1.0
3,244,294	-		LRK53_RS14815	0.79	-0.7
3,244,294	-		LRK53_RS14815	0.79	-0.5
3,244,294	-		LRK53_RS14815	0.79	-1.4
3,244,294	-		LRK53_RS14815	0.79	+1.0
3,244,294	-		LRK53_RS14815	0.79	-1.2
3,244,294	-		LRK53_RS14815	0.79	+2.0
3,244,294	-		LRK53_RS14815	0.79	-2.0
3,244,294	-		LRK53_RS14815	0.79	-1.4
3,244,294	-		LRK53_RS14815	0.79	-0.3
3,244,326	+		LRK53_RS14815	0.86	+2.0
3,244,326	+		LRK53_RS14815	0.86	-1.6
3,244,326	+		LRK53_RS14815	0.86	+1.4
3,244,326	+		LRK53_RS14815	0.86	-0.6
3,244,326	+		LRK53_RS14815	0.86	+1.0
3,244,326	+		LRK53_RS14815	0.86	-0.4
3,244,326	+		LRK53_RS14815	0.86	-0.6
3,244,326	+		LRK53_RS14815	0.86	-0.4
3,244,326	+		LRK53_RS14815	0.86	-0.5
3,244,326	+		LRK53_RS14815	0.86	-1.8
3,244,326	+		LRK53_RS14815	0.86	-2.4
3,244,326	+		LRK53_RS14815	0.86	+0.6
3,244,326	+		LRK53_RS14815	0.86	-1.4
3,244,326	+		LRK53_RS14815	0.86	-0.6
3,244,326	+		LRK53_RS14815	0.86	-0.2
3,244,326	+		LRK53_RS14815	0.86	+0.4
3,244,327	-		LRK53_RS14815	0.87	+0.4
3,244,327	-		LRK53_RS14815	0.87	+0.8
3,244,327	-		LRK53_RS14815	0.87	-0.6
3,244,327	-		LRK53_RS14815	0.87	-1.4
3,244,327	-		LRK53_RS14815	0.87	-1.8
3,244,327	-		LRK53_RS14815	0.87	-0.0
3,244,344	+				-0.0
3,244,344	+				-1.1
3,244,345	-				-1.8
3,244,345	-				-0.7
3,244,462	+		LRK53_RS14820	0.14	-2.2
3,244,462	+		LRK53_RS14820	0.14	-1.0
3,244,462	+		LRK53_RS14820	0.14	-0.0
3,244,463	-		LRK53_RS14820	0.14	+1.5
3,244,780	+		LRK53_RS14820	0.64	-0.6
3,244,780	+		LRK53_RS14820	0.64	+1.0
3,244,780	+		LRK53_RS14820	0.64	+1.0
3,244,780	+		LRK53_RS14820	0.64	-0.4
3,244,780	+		LRK53_RS14820	0.64	-0.6
3,244,781	-		LRK53_RS14820	0.64	-0.0
3,244,781	-		LRK53_RS14820	0.64	-0.6
3,244,781	-		LRK53_RS14820	0.64	-0.4
3,244,781	-		LRK53_RS14820	0.64	-0.8
3,244,781	-		LRK53_RS14820	0.64	-0.8
3,244,846	+		LRK53_RS14820	0.74	-0.3
3,244,846	+		LRK53_RS14820	0.74	+2.0
3,244,847	-		LRK53_RS14820	0.74	-1.0
3,244,847	-		LRK53_RS14820	0.74	-1.2
3,244,847	-		LRK53_RS14820	0.74	-0.7
3,244,847	-		LRK53_RS14820	0.74	+0.4