Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS05860

Experiment: R2A_PIPES no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES no stress control
1,358,159	+		LRK53_RS05855	0.36	-0.4
1,358,159	+		LRK53_RS05855	0.36	-1.0
1,358,159	+		LRK53_RS05855	0.36	-0.7
1,358,159	+		LRK53_RS05855	0.36	-0.0
1,358,159	+		LRK53_RS05855	0.36	-0.0
1,358,159	+		LRK53_RS05855	0.36	-0.0
1,358,160	-		LRK53_RS05855	0.37	+1.0
1,358,160	-		LRK53_RS05855	0.37	-1.0
1,358,231	+		LRK53_RS05855	0.44	-0.4
1,358,231	+		LRK53_RS05855	0.44	+0.2
1,358,231	+		LRK53_RS05855	0.44	-0.9
1,358,231	+		LRK53_RS05855	0.44	-1.6
1,358,231	+		LRK53_RS05855	0.44	-0.6
1,358,231	+		LRK53_RS05855	0.44	-0.6
1,358,231	+		LRK53_RS05855	0.44	+0.6
1,358,231	+		LRK53_RS05855	0.44	-0.6
1,358,231	+		LRK53_RS05855	0.44	-0.1
1,358,231	+		LRK53_RS05855	0.44	-0.6
1,358,231	+		LRK53_RS05855	0.44	-1.0
1,358,231	+		LRK53_RS05855	0.44	-0.6
1,358,232	-		LRK53_RS05855	0.44	-2.0
1,358,232	-		LRK53_RS05855	0.44	-0.8
1,358,232	-		LRK53_RS05855	0.44	-1.2
1,358,232	-		LRK53_RS05855	0.44	+1.0
1,358,232	-		LRK53_RS05855	0.44	-0.6
1,358,232	-		LRK53_RS05855	0.44	-1.2
1,358,232	-		LRK53_RS05855	0.44	-0.8
1,358,232	-		LRK53_RS05855	0.44	-1.2
1,358,232	-		LRK53_RS05855	0.44	-0.0
1,358,232	-		LRK53_RS05855	0.44	+0.5
1,358,380	+		LRK53_RS05855	0.59	-2.4
1,358,380	+		LRK53_RS05855	0.59	-1.7
1,358,380	+		LRK53_RS05855	0.59	-0.2
1,358,380	+		LRK53_RS05855	0.59	-0.0
1,358,381	-		LRK53_RS05855	0.59	-0.6
1,358,381	-		LRK53_RS05855	0.59	-1.4
1,358,453	+		LRK53_RS05855	0.66	-1.6
1,358,453	+		LRK53_RS05855	0.66	+0.1
1,358,453	+		LRK53_RS05855	0.66	-0.3
1,358,453	+		LRK53_RS05855	0.66	+0.2
1,358,453	+		LRK53_RS05855	0.66	-0.4
1,358,453	+		LRK53_RS05855	0.66	-0.8
1,358,453	+		LRK53_RS05855	0.66	-1.1
1,358,453	+		LRK53_RS05855	0.66	-0.6
1,358,453	+		LRK53_RS05855	0.66	-0.8
1,358,453	+		LRK53_RS05855	0.66	+0.5
1,358,454	-		LRK53_RS05855	0.66	-0.5
1,358,501	+		LRK53_RS05855	0.71	-0.4
1,358,501	+		LRK53_RS05855	0.71	-1.0
1,358,501	+		LRK53_RS05855	0.71	-2.1
1,358,501	+		LRK53_RS05855	0.71	-1.5
1,358,501	+		LRK53_RS05855	0.71	-2.5
1,358,501	+		LRK53_RS05855	0.71	-0.6
1,358,501	+		LRK53_RS05855	0.71	-0.4
1,358,501	+		LRK53_RS05855	0.71	-0.6
1,358,501	+		LRK53_RS05855	0.71	-0.3
1,358,501	+		LRK53_RS05855	0.71	-0.4
1,358,501	+		LRK53_RS05855	0.71	+1.0
1,358,501	+		LRK53_RS05855	0.71	+0.6
1,358,501	+		LRK53_RS05855	0.71	+0.4
1,358,501	+		LRK53_RS05855	0.71	-0.6
1,358,501	+		LRK53_RS05855	0.71	-0.8
1,358,501	+		LRK53_RS05855	0.71	-1.4
1,358,501	+		LRK53_RS05855	0.71	-0.8
1,358,501	+		LRK53_RS05855	0.71	-1.9
1,358,502	-		LRK53_RS05855	0.71	+2.0
1,358,502	-		LRK53_RS05855	0.71	+0.4
1,358,502	-		LRK53_RS05855	0.71	-0.0
1,358,502	-		LRK53_RS05855	0.71	-0.4
1,358,502	-		LRK53_RS05855	0.71	+1.0
1,358,502	-		LRK53_RS05855	0.71	-1.1
1,358,502	-		LRK53_RS05855	0.71	-0.6
1,358,681	+		LRK53_RS05855	0.89	-1.8
1,358,681	+		LRK53_RS05855	0.89	-0.1
1,358,681	+		LRK53_RS05855	0.89	-1.1
1,358,681	+		LRK53_RS05855	0.89	+0.3
1,358,681	+		LRK53_RS05855	0.89	-1.0
1,358,681	+		LRK53_RS05855	0.89	-1.6
1,358,681	+		LRK53_RS05855	0.89	-0.8
1,358,681	+		LRK53_RS05855	0.89	-0.9
1,358,682	-		LRK53_RS05855	0.89	-0.6
1,358,682	-		LRK53_RS05855	0.89	-0.7
1,358,682	-		LRK53_RS05855	0.89	+1.0
1,358,682	-		LRK53_RS05855	0.89	-0.8
1,358,682	-		LRK53_RS05855	0.89	-0.6
1,358,682	-		LRK53_RS05855	0.89	+1.4
1,358,682	-		LRK53_RS05855	0.89	-0.7
1,358,682	-		LRK53_RS05855	0.89	-0.1
1,358,682	-		LRK53_RS05855	0.89	-0.3
1,358,682	-		LRK53_RS05855	0.89	-0.0
1,358,682	-		LRK53_RS05855	0.89	-1.0
1,358,682	-		LRK53_RS05855	0.89	-0.5
1,358,682	-		LRK53_RS05855	0.89	-0.0
1,358,727	-				-0.9
1,358,804	-				-0.4
1,358,804	-				+0.3
1,358,804	-				-1.8
1,358,804	-				+1.0
1,358,810	-				-1.0
1,358,810	-				-0.6
1,358,810	-				+0.0
1,358,810	-				-1.4
1,358,931	+				-0.6
1,358,931	+				-0.0
1,358,931	+				-1.6
1,358,931	+				-0.6
1,358,932	-				-1.4
1,358,986	+		LRK53_RS05860	0.17	-1.1
1,358,987	-		LRK53_RS05860	0.18	-1.0
1,359,132	+		LRK53_RS05860	0.62	+2.0
1,359,132	+		LRK53_RS05860	0.62	-1.2
1,359,350	-				-0.4
1,359,350	-				-0.0
1,359,382	+				-0.0
1,359,382	+				+1.6
1,359,382	+				-0.3
1,359,383	-				+0.6
1,359,396	+				-0.0
1,359,397	-				-0.5
1,359,397	-				-0.8
1,359,480	-				-0.0
1,359,480	-				-0.7
1,359,480	-				+0.4
1,359,486	-				+1.0
1,359,486	-				-1.8
1,359,486	-				+0.4
1,359,486	-				-1.4
1,359,486	-				-0.4
1,359,486	-				-2.4
1,359,486	-				-1.4
1,359,486	-				-0.0
1,359,524	+				+1.7
1,359,524	+				+0.6
1,359,524	+				-0.2
1,359,805	+		LRK53_RS05865	0.45	+1.0
1,359,805	+		LRK53_RS05865	0.45	-2.7
1,359,806	-		LRK53_RS05865	0.45	-0.0
1,359,806	-		LRK53_RS05865	0.45	-3.1
1,359,806	-		LRK53_RS05865	0.45	-0.0
1,359,806	-		LRK53_RS05865	0.45	-0.6
1,359,806	-		LRK53_RS05865	0.45	-0.4
1,359,806	-		LRK53_RS05865	0.45	-1.4
1,359,856	+		LRK53_RS05865	0.54	-1.6
1,359,873	+		LRK53_RS05865	0.57	-0.0
1,359,873	+		LRK53_RS05865	0.57	-0.6
1,359,874	-		LRK53_RS05865	0.57	-2.6
1,359,874	-		LRK53_RS05865	0.57	-0.6
1,359,874	-		LRK53_RS05865	0.57	+1.0
1,359,874	-		LRK53_RS05865	0.57	-1.8
1,359,874	-		LRK53_RS05865	0.57	-0.0
1,359,879	+		LRK53_RS05865	0.58	+1.4
1,359,879	+		LRK53_RS05865	0.58	-0.6
1,359,879	+		LRK53_RS05865	0.58	-1.5
1,359,879	+		LRK53_RS05865	0.58	-2.3
1,359,879	+		LRK53_RS05865	0.58	+1.0
1,359,879	+		LRK53_RS05865	0.58	-1.3
1,359,879	+		LRK53_RS05865	0.58	-0.6
1,359,879	+		LRK53_RS05865	0.58	-0.6
1,359,879	+		LRK53_RS05865	0.58	-2.4
1,359,879	+		LRK53_RS05865	0.58	-1.6
1,359,880	-		LRK53_RS05865	0.58	-0.6
1,359,880	-		LRK53_RS05865	0.58	-1.6
1,359,880	-		LRK53_RS05865	0.58	-1.0
1,359,880	-		LRK53_RS05865	0.58	-1.4
1,359,958	+		LRK53_RS05865	0.71	+1.0
1,359,958	+		LRK53_RS05865	0.71	-0.6
1,359,958	+		LRK53_RS05865	0.71	-0.0
1,359,958	+		LRK53_RS05865	0.71	-0.6
1,360,199	+				-0.0
1,360,200	-				-0.8