Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16445

Experiment: pH4.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH4.5
3,620,832	+				-1.3
3,620,832	+				+0.4
3,620,832	+				-0.1
3,620,832	+				+0.4
3,620,833	-				-1.4
3,620,952	+		LRK53_RS16440	0.15	+0.2
3,620,952	+		LRK53_RS16440	0.15	-0.6
3,620,952	+		LRK53_RS16440	0.15	-0.4
3,620,952	+		LRK53_RS16440	0.15	-1.4
3,620,952	+		LRK53_RS16440	0.15	-0.3
3,620,952	+		LRK53_RS16440	0.15	-0.6
3,620,952	+		LRK53_RS16440	0.15	+0.2
3,620,952	+		LRK53_RS16440	0.15	-0.6
3,620,952	+		LRK53_RS16440	0.15	+1.0
3,620,952	+		LRK53_RS16440	0.15	-1.3
3,620,952	+		LRK53_RS16440	0.15	-2.3
3,620,952	+		LRK53_RS16440	0.15	-1.0
3,620,952	+		LRK53_RS16440	0.15	-3.6
3,620,952	+		LRK53_RS16440	0.15	+1.3
3,620,952	+		LRK53_RS16440	0.15	+3.0
3,620,952	+		LRK53_RS16440	0.15	-0.6
3,620,952	+		LRK53_RS16440	0.15	-0.7
3,620,952	+		LRK53_RS16440	0.15	-2.4
3,620,952	+		LRK53_RS16440	0.15	-0.6
3,620,952	+		LRK53_RS16440	0.15	+0.0
3,620,952	+		LRK53_RS16440	0.15	+1.0
3,620,952	+		LRK53_RS16440	0.15	-1.1
3,620,952	+		LRK53_RS16440	0.15	-0.2
3,620,952	+		LRK53_RS16440	0.15	+0.3
3,620,953	-		LRK53_RS16440	0.15	-1.0
3,620,953	-		LRK53_RS16440	0.15	-1.0
3,620,953	-		LRK53_RS16440	0.15	+0.4
3,620,953	-		LRK53_RS16440	0.15	+0.2
3,620,953	-		LRK53_RS16440	0.15	+0.2
3,620,953	-		LRK53_RS16440	0.15	-0.9
3,620,953	-		LRK53_RS16440	0.15	-1.3
3,620,953	-		LRK53_RS16440	0.15	-0.9
3,620,953	-		LRK53_RS16440	0.15	-2.9
3,620,953	-		LRK53_RS16440	0.15	-0.6
3,620,953	-		LRK53_RS16440	0.15	-1.8
3,620,953	-		LRK53_RS16440	0.15	-1.3
3,620,953	-		LRK53_RS16440	0.15	+0.3
3,620,953	-		LRK53_RS16440	0.15	+1.6
3,620,953	-		LRK53_RS16440	0.15	-1.3
3,620,953	-		LRK53_RS16440	0.15	-0.7
3,620,953	-		LRK53_RS16440	0.15	+0.6
3,620,953	-		LRK53_RS16440	0.15	+1.0
3,620,953	-		LRK53_RS16440	0.15	-1.3
3,620,953	-		LRK53_RS16440	0.15	+0.0
3,620,953	-		LRK53_RS16440	0.15	-0.6
3,620,953	-		LRK53_RS16440	0.15	+1.4
3,620,953	-		LRK53_RS16440	0.15	-0.4
3,620,953	-		LRK53_RS16440	0.15	-1.3
3,620,954	+		LRK53_RS16440	0.16	-2.0
3,620,954	+		LRK53_RS16440	0.16	+0.3
3,620,954	+		LRK53_RS16440	0.16	+0.0
3,620,954	+		LRK53_RS16440	0.16	+0.2
3,620,955	-		LRK53_RS16440	0.16	-1.0
3,620,955	-		LRK53_RS16440	0.16	-0.9
3,620,955	-		LRK53_RS16440	0.16	-0.9
3,620,955	-		LRK53_RS16440	0.16	-0.2
3,621,103	+		LRK53_RS16440	0.39	+0.0
3,621,103	+		LRK53_RS16440	0.39	-1.0
3,621,103	+		LRK53_RS16440	0.39	-0.2
3,621,103	+		LRK53_RS16440	0.39	-0.5
3,621,103	+		LRK53_RS16440	0.39	-1.0
3,621,103	+		LRK53_RS16440	0.39	+0.0
3,621,103	+		LRK53_RS16440	0.39	-1.0
3,621,103	+		LRK53_RS16440	0.39	-0.4
3,621,104	-		LRK53_RS16440	0.39	-0.6
3,621,104	-		LRK53_RS16440	0.39	+1.0
3,621,104	-		LRK53_RS16440	0.39	-1.0
3,621,205	+		LRK53_RS16440	0.54	+0.2
3,621,206	-		LRK53_RS16440	0.54	+2.0
3,621,206	-		LRK53_RS16440	0.54	+2.0
3,621,206	-		LRK53_RS16440	0.54	+1.0
3,621,312	+		LRK53_RS16440	0.71	+0.0
3,621,312	+		LRK53_RS16440	0.71	+0.3
3,621,312	+		LRK53_RS16440	0.71	+1.0
3,621,312	+		LRK53_RS16440	0.71	-1.0
3,621,313	-		LRK53_RS16440	0.71	+0.8
3,621,313	-		LRK53_RS16440	0.71	-0.9
3,621,313	-		LRK53_RS16440	0.71	+0.0
3,621,313	-		LRK53_RS16440	0.71	+0.4
3,621,320	+		LRK53_RS16440	0.72	-1.2
3,621,445	+				-2.0
3,621,446	-				+0.4
3,621,446	-				+1.0
3,621,446	-				-1.8
3,621,528	+				-0.4
3,621,528	+				-1.3
3,621,529	-				-0.3
3,621,529	-				-1.3
3,621,529	-				-2.4
3,621,614	-				+1.0
3,621,640	+				-1.6
3,622,153	+		LRK53_RS16445	0.53	-1.6
3,622,153	+		LRK53_RS16445	0.53	-0.6
3,622,153	+		LRK53_RS16445	0.53	+0.5
3,622,153	+		LRK53_RS16445	0.53	-1.0
3,622,153	+		LRK53_RS16445	0.53	+1.8
3,622,153	+		LRK53_RS16445	0.53	-0.3
3,622,153	+		LRK53_RS16445	0.53	-1.3
3,622,154	-		LRK53_RS16445	0.54	-2.6
3,622,154	-		LRK53_RS16445	0.54	-0.4
3,622,154	-		LRK53_RS16445	0.54	-1.3
3,622,154	-		LRK53_RS16445	0.54	+0.0
3,622,154	-		LRK53_RS16445	0.54	+0.8
3,622,154	-		LRK53_RS16445	0.54	-0.3
3,622,154	-		LRK53_RS16445	0.54	-0.4
3,622,154	-		LRK53_RS16445	0.54	+1.0
3,622,154	-		LRK53_RS16445	0.54	-0.3
3,622,154	-		LRK53_RS16445	0.54	-1.0
3,622,171	+		LRK53_RS16445	0.55	+0.0
3,622,171	+		LRK53_RS16445	0.55	-1.0
3,622,172	-		LRK53_RS16445	0.55	-2.1
3,622,172	-		LRK53_RS16445	0.55	+0.0
3,622,172	-		LRK53_RS16445	0.55	+1.0
3,622,343	-		LRK53_RS16445	0.73	-1.8
3,622,343	-		LRK53_RS16445	0.73	-1.0
3,622,343	-		LRK53_RS16445	0.73	+1.0
3,622,343	-		LRK53_RS16445	0.73	+0.0
3,622,346	+		LRK53_RS16445	0.73	+0.4
3,622,346	+		LRK53_RS16445	0.73	-0.8
3,622,346	+		LRK53_RS16445	0.73	+0.1
3,622,346	+		LRK53_RS16445	0.73	-0.6
3,622,346	+		LRK53_RS16445	0.73	-0.8
3,622,346	+		LRK53_RS16445	0.73	+1.0
3,622,346	+		LRK53_RS16445	0.73	+1.0
3,622,346	+		LRK53_RS16445	0.73	+1.0
3,622,346	+		LRK53_RS16445	0.73	+0.0
3,622,347	-		LRK53_RS16445	0.73	+0.4
3,622,347	-		LRK53_RS16445	0.73	+0.6
3,622,347	-		LRK53_RS16445	0.73	+0.9
3,622,397	+		LRK53_RS16445	0.78	-1.4
3,622,397	+		LRK53_RS16445	0.78	+0.0
3,622,423	+		LRK53_RS16445	0.81	+0.4
3,622,423	+		LRK53_RS16445	0.81	+0.0
3,622,424	-		LRK53_RS16445	0.81	+1.0
3,622,432	+		LRK53_RS16445	0.82	-1.3
3,622,432	+		LRK53_RS16445	0.82	+2.0
3,622,432	+		LRK53_RS16445	0.82	-1.1
3,622,432	+		LRK53_RS16445	0.82	-0.3
3,622,432	+		LRK53_RS16445	0.82	-0.6
3,622,432	+		LRK53_RS16445	0.82	+1.0
3,622,432	+		LRK53_RS16445	0.82	-0.6
3,622,433	-		LRK53_RS16445	0.82	-1.6
3,622,433	-		LRK53_RS16445	0.82	-1.1
3,622,433	-		LRK53_RS16445	0.82	+1.0
3,622,433	-		LRK53_RS16445	0.82	-1.0
3,622,433	-		LRK53_RS16445	0.82	-1.3
3,622,433	-		LRK53_RS16445	0.82	-1.0
3,622,433	-		LRK53_RS16445	0.82	-0.6
3,622,480	+		LRK53_RS16445	0.87	+1.6
3,622,480	+		LRK53_RS16445	0.87	-1.1
3,622,480	+		LRK53_RS16445	0.87	-1.3
3,622,480	+		LRK53_RS16445	0.87	-0.2
3,622,480	+		LRK53_RS16445	0.87	+0.0
3,622,480	+		LRK53_RS16445	0.87	-1.2
3,622,480	+		LRK53_RS16445	0.87	-2.3
3,622,480	+		LRK53_RS16445	0.87	+0.0
3,622,480	+		LRK53_RS16445	0.87	-1.0
3,622,481	-		LRK53_RS16445	0.87	-0.6
3,622,481	-		LRK53_RS16445	0.87	-0.7
3,622,570	+				-0.3
3,622,570	+				+0.0
3,622,570	+				-1.3
3,622,570	+				-0.6
3,622,571	-				-1.0
3,622,571	-				+0.0
3,622,571	-				-2.0
3,622,663	+				-0.6
3,622,663	+				-1.3
3,622,664	-				-0.6
3,622,664	-				-0.3
3,622,664	-				-0.6
3,622,664	-				-0.6
3,622,734	+				-1.0
3,622,734	+				+0.0
3,622,734	+				+0.0
3,622,735	-				+0.2
3,622,735	-				+1.0
3,622,735	-				-1.0
3,622,735	-				-0.6
3,622,735	-				-0.9
3,622,735	-				+0.0
3,622,736	+				-2.1
3,622,736	+				-1.0
3,622,736	+				-1.6
3,622,736	+				-1.3
3,622,736	+				+0.0
3,622,737	-				+0.0
3,622,737	-				-0.6
3,622,737	-				+2.0
3,622,821	+		LRK53_RS16450	0.14	-0.6
3,622,821	+		LRK53_RS16450	0.14	+0.1
3,622,821	+		LRK53_RS16450	0.14	-1.1
3,622,821	+		LRK53_RS16450	0.14	-1.2
3,622,821	+		LRK53_RS16450	0.14	-0.2
3,622,822	-		LRK53_RS16450	0.15	+1.0
3,622,989	+		LRK53_RS16450	0.35	+0.0
3,622,989	+		LRK53_RS16450	0.35	-1.6
3,622,989	+		LRK53_RS16450	0.35	-1.0
3,622,989	+		LRK53_RS16450	0.35	+1.0
3,622,990	-		LRK53_RS16450	0.35	-0.2
3,622,990	-		LRK53_RS16450	0.35	+1.0
3,622,991	+		LRK53_RS16450	0.35	-0.6
3,622,991	+		LRK53_RS16450	0.35	+1.6
3,622,991	+		LRK53_RS16450	0.35	+0.6
3,622,991	+		LRK53_RS16450	0.35	-0.4
3,622,992	-		LRK53_RS16450	0.35	-1.0
3,622,992	-		LRK53_RS16450	0.35	+1.0
3,622,992	-		LRK53_RS16450	0.35	-0.8
3,622,992	-		LRK53_RS16450	0.35	+1.0
3,623,052	+		LRK53_RS16450	0.42	-1.3
3,623,052	+		LRK53_RS16450	0.42	-1.3
3,623,052	+		LRK53_RS16450	0.42	-0.2
3,623,052	+		LRK53_RS16450	0.42	+0.0
3,623,053	-		LRK53_RS16450	0.42	+2.6
3,623,053	-		LRK53_RS16450	0.42	+0.0
3,623,053	-		LRK53_RS16450	0.42	+0.0
3,623,095	+		LRK53_RS16450	0.47	-0.4
3,623,107	+		LRK53_RS16450	0.49	+3.6
3,623,107	+		LRK53_RS16450	0.49	-1.0
3,623,108	-		LRK53_RS16450	0.49	+1.0
3,623,139	+		LRK53_RS16450	0.53	-0.8
3,623,139	+		LRK53_RS16450	0.53	-2.1
3,623,139	+		LRK53_RS16450	0.53	-1.6
3,623,140	-		LRK53_RS16450	0.53	-1.0
3,623,140	-		LRK53_RS16450	0.53	+0.4
3,623,140	-		LRK53_RS16450	0.53	+0.0
3,623,182	-		LRK53_RS16450	0.58	-1.2
3,623,223	+		LRK53_RS16450	0.63	+0.7
3,623,223	+		LRK53_RS16450	0.63	-1.3
3,623,224	-		LRK53_RS16450	0.63	-2.7
3,623,229	+		LRK53_RS16450	0.63	+0.4
3,623,229	+		LRK53_RS16450	0.63	+1.0
3,623,230	-		LRK53_RS16450	0.63	+1.0
3,623,230	-		LRK53_RS16450	0.63	-1.3
3,623,230	-		LRK53_RS16450	0.63	+1.0
3,623,573	+				-1.0
3,623,574	-				-0.3