Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS05255

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
1,228,799	+		LRK53_RS05245	0.79	-1.7
1,228,799	+		LRK53_RS05245	0.79	-1.7
1,228,817	+		LRK53_RS05245	0.80	-0.6
1,228,817	+		LRK53_RS05245	0.80	-0.7
1,228,817	+		LRK53_RS05245	0.80	-0.8
1,228,818	-		LRK53_RS05245	0.80	-1.8
1,228,818	-		LRK53_RS05245	0.80	-1.4
1,228,818	-		LRK53_RS05245	0.80	-0.4
1,228,818	-		LRK53_RS05245	0.80	-1.4
1,228,818	-		LRK53_RS05245	0.80	-0.7
1,228,818	-		LRK53_RS05245	0.80	-0.2
1,228,818	-		LRK53_RS05245	0.80	-1.8
1,228,818	-		LRK53_RS05245	0.80	-1.0
1,229,035	-				-2.4
1,229,084	+				+1.0
1,229,085	+				+0.4
1,229,085	+				+1.0
1,229,085	+				-0.2
1,229,085	+				+1.0
1,229,085	+				-1.4
1,229,085	+				-1.8
1,229,085	+				-0.5
1,229,085	+				-2.0
1,229,085	+				-0.7
1,229,085	+				-1.1
1,229,085	+				+1.0
1,229,085	+				+0.7
1,229,086	-				-1.6
1,229,086	-				+0.2
1,229,086	-				-0.0
1,229,086	-				-0.6
1,229,086	-				-1.2
1,229,086	-				+1.0
1,229,086	-				-0.5
1,229,086	-				-1.4
1,229,086	-				+1.0
1,229,086	-				-1.0
1,229,086	-				-1.1
1,229,086	-				+0.2
1,229,086	-				-0.4
1,229,086	-				-0.4
1,229,086	-				-1.0
1,229,179	-				-0.7
1,229,368	+		LRK53_RS05250	0.30	-1.0
1,229,368	+		LRK53_RS05250	0.30	-1.0
1,229,369	-		LRK53_RS05250	0.30	-0.4
1,229,369	-		LRK53_RS05250	0.30	+2.0
1,229,369	-		LRK53_RS05250	0.30	+1.0
1,229,369	-		LRK53_RS05250	0.30	+0.2
1,229,369	-		LRK53_RS05250	0.30	-1.2
1,229,369	-		LRK53_RS05250	0.30	-0.9
1,229,369	-		LRK53_RS05250	0.30	+2.0
1,229,369	-		LRK53_RS05250	0.30	-0.5
1,229,369	-		LRK53_RS05250	0.30	-1.6
1,229,369	-		LRK53_RS05250	0.30	+0.4
1,229,369	-		LRK53_RS05250	0.30	+1.0
1,229,380	+		LRK53_RS05250	0.33	-0.7
1,229,381	-		LRK53_RS05250	0.33	+0.4
1,229,381	-		LRK53_RS05250	0.33	+3.0
1,229,381	-		LRK53_RS05250	0.33	+1.6
1,229,381	-		LRK53_RS05250	0.33	+0.4
1,229,381	-		LRK53_RS05250	0.33	-0.2
1,229,381	-		LRK53_RS05250	0.33	-1.4
1,229,381	-		LRK53_RS05250	0.33	-1.4
1,229,381	-		LRK53_RS05250	0.33	-1.4
1,229,381	-		LRK53_RS05250	0.33	+1.0
1,229,381	-		LRK53_RS05250	0.33	-0.6
1,229,474	-		LRK53_RS05250	0.55	-1.3
1,229,474	-		LRK53_RS05250	0.55	-0.6
1,229,545	+		LRK53_RS05250	0.72	-1.4
1,229,545	+		LRK53_RS05250	0.72	-2.9
1,229,545	+		LRK53_RS05250	0.72	+0.2
1,229,545	+		LRK53_RS05250	0.72	+0.2
1,229,545	+		LRK53_RS05250	0.72	-0.6
1,229,545	+		LRK53_RS05250	0.72	-0.6
1,229,546	-		LRK53_RS05250	0.73	+1.0
1,229,546	-		LRK53_RS05250	0.73	-0.4
1,229,546	-		LRK53_RS05250	0.73	-1.5
1,229,546	-		LRK53_RS05250	0.73	+1.4
1,229,575	+		LRK53_RS05250	0.80	+0.4
1,229,575	+		LRK53_RS05250	0.80	-0.8
1,229,575	+		LRK53_RS05250	0.80	+0.6
1,229,575	+		LRK53_RS05250	0.80	-1.0
1,229,575	+		LRK53_RS05250	0.80	-0.4
1,229,575	+		LRK53_RS05250	0.80	-0.3
1,229,575	+		LRK53_RS05250	0.80	+1.0
1,229,575	+		LRK53_RS05250	0.80	-0.8
1,229,575	+		LRK53_RS05250	0.80	-0.0
1,229,576	-		LRK53_RS05250	0.80	+1.0
1,229,576	-		LRK53_RS05250	0.80	-2.4
1,229,576	-		LRK53_RS05250	0.80	+1.0
1,229,576	-		LRK53_RS05250	0.80	-0.8
1,229,576	-		LRK53_RS05250	0.80	+1.0
1,229,576	-		LRK53_RS05250	0.80	+1.0
1,229,576	-		LRK53_RS05250	0.80	+1.0
1,229,582	-		LRK53_RS05250	0.81	+0.6
1,229,732	-				-1.0
1,229,732	-				-0.4
1,229,780	-				-1.0
1,229,780	-				+0.5
1,229,780	-				-0.6
1,229,873	+				-0.6
1,229,873	+				-0.4
1,229,873	+				+1.0
1,229,873	+				+0.2
1,229,873	+				-1.0
1,229,873	+				-1.0
1,229,873	+				-1.7
1,229,873	+				-0.4
1,229,873	+				-0.4
1,229,874	-				-0.1
1,229,874	-				-1.1
1,229,874	-				-0.0
1,229,874	-				+2.0
1,229,874	-				-0.1
1,229,874	-				-1.0
1,229,874	-				+0.2
1,229,874	-				-0.8
1,229,874	-				-0.6
1,230,432	+		LRK53_RS05255	0.67	-0.0
1,230,432	+		LRK53_RS05255	0.67	+1.0
1,230,432	+		LRK53_RS05255	0.67	-0.5
1,230,432	+		LRK53_RS05255	0.67	+1.0
1,230,432	+		LRK53_RS05255	0.67	-0.4
1,230,432	+		LRK53_RS05255	0.67	-0.6
1,230,433	-		LRK53_RS05255	0.68	+0.7
1,230,433	-		LRK53_RS05255	0.68	+0.4
1,230,433	-		LRK53_RS05255	0.68	-0.6
1,230,433	-		LRK53_RS05255	0.68	+0.0
1,230,433	-		LRK53_RS05255	0.68	+0.1
1,230,433	-		LRK53_RS05255	0.68	-0.6
1,230,433	-		LRK53_RS05255	0.68	-0.8
1,230,440	+		LRK53_RS05255	0.68	-0.6
1,230,440	+		LRK53_RS05255	0.68	+0.2
1,230,440	+		LRK53_RS05255	0.68	-0.4
1,230,440	+		LRK53_RS05255	0.68	-0.6
1,230,440	+		LRK53_RS05255	0.68	-0.6
1,230,440	+		LRK53_RS05255	0.68	+1.0
1,230,440	+		LRK53_RS05255	0.68	+1.0
1,230,441	-		LRK53_RS05255	0.68	+2.6
1,230,441	-		LRK53_RS05255	0.68	-0.6
1,230,441	-		LRK53_RS05255	0.68	-1.4
1,230,441	-		LRK53_RS05255	0.68	+0.2
1,230,441	-		LRK53_RS05255	0.68	-0.8
1,230,441	-		LRK53_RS05255	0.68	-1.0
1,230,441	-		LRK53_RS05255	0.68	+1.0
1,230,441	-		LRK53_RS05255	0.68	+2.0
1,230,441	-		LRK53_RS05255	0.68	-0.4
1,230,441	-		LRK53_RS05255	0.68	+0.6
1,230,720	+				+1.0
1,230,720	+				+1.0
1,230,720	+				-1.4
1,230,720	+				+0.4
1,230,720	+				-1.4
1,230,720	+				-0.0
1,230,720	+				+0.2
1,230,720	+				-1.8
1,230,720	+				+0.6
1,230,720	+				-0.6
1,230,720	+				-0.0
1,230,720	+				-0.3
1,230,721	-				+0.1
1,230,721	-				-0.3
1,230,721	-				+1.0
1,230,721	-				-0.6
1,230,721	-				+0.7
1,230,721	-				-0.0
1,230,721	-				-0.5
1,230,721	-				-0.3
1,230,721	-				-0.6
1,230,721	-				+0.4
1,230,721	-				-2.2
1,230,721	-				-1.4
1,230,721	-				-0.0
1,230,721	-				+0.4
1,230,721	-				-2.5
1,230,721	-				-1.6
1,230,721	-				-0.9
1,230,721	-				-0.0
1,230,721	-				-0.0
1,230,721	-				-0.5
1,230,721	-				+0.7
1,230,767	+				-0.6
1,230,767	+				-0.0
1,230,767	+				-0.9
1,230,767	+				+1.0
1,230,767	+				-0.6
1,230,767	+				-0.6
1,230,768	-				+0.0
1,230,768	-				+1.5
1,230,820	+				-1.6
1,230,820	+				-0.4
1,230,820	+				-0.0
1,230,820	+				-0.5
1,230,820	+				+1.0
1,230,820	+				-0.4
1,230,820	+				-1.4
1,230,821	-				-1.0
1,230,821	-				+1.5
1,230,821	-				-1.8
1,230,821	-				-0.6
1,230,821	-				+1.0
1,230,821	-				-2.2
1,230,821	-				+0.6
1,230,821	-				-1.2
1,231,003	+				-0.4
1,231,003	+				-0.0
1,231,003	+				-0.0
1,231,003	+				+1.0
1,231,003	+				-0.8
1,231,004	-				-0.3
1,231,004	-				-2.5
1,231,163	+				-0.2
1,231,163	+				-1.4
1,231,164	-				-0.8
1,231,164	-				-1.4
1,231,164	-				-2.1
1,231,331	+		LRK53_RS05260	0.11	-1.4
1,231,331	+		LRK53_RS05260	0.11	-0.3
1,231,331	+		LRK53_RS05260	0.11	-1.0
1,231,331	+		LRK53_RS05260	0.11	-1.3
1,231,331	+		LRK53_RS05260	0.11	-1.5
1,231,331	+		LRK53_RS05260	0.11	+0.4
1,231,331	+		LRK53_RS05260	0.11	-0.4
1,231,331	+		LRK53_RS05260	0.11	+1.0
1,231,331	+		LRK53_RS05260	0.11	-0.0
1,231,331	+		LRK53_RS05260	0.11	-0.4
1,231,331	+		LRK53_RS05260	0.11	+2.6
1,231,331	+		LRK53_RS05260	0.11	-0.6
1,231,331	+		LRK53_RS05260	0.11	-0.4
1,231,331	+		LRK53_RS05260	0.11	-0.9
1,231,331	+		LRK53_RS05260	0.11	-1.8
1,231,331	+		LRK53_RS05260	0.11	-1.5
1,231,331	+		LRK53_RS05260	0.11	-0.0
1,231,331	+		LRK53_RS05260	0.11	-1.5
1,231,331	+		LRK53_RS05260	0.11	-1.4
1,231,331	+		LRK53_RS05260	0.11	+1.0
1,231,331	+		LRK53_RS05260	0.11	-2.2
1,231,331	+		LRK53_RS05260	0.11	-0.0
1,231,331	+		LRK53_RS05260	0.11	-1.0
1,231,331	+		LRK53_RS05260	0.11	-0.7
1,231,332	-		LRK53_RS05260	0.11	-0.0
1,231,332	-		LRK53_RS05260	0.11	-1.4
1,231,332	-		LRK53_RS05260	0.11	-1.0
1,231,332	-		LRK53_RS05260	0.11	-0.7
1,231,332	-		LRK53_RS05260	0.11	+0.7
1,231,332	-		LRK53_RS05260	0.11	-0.2
1,231,332	-		LRK53_RS05260	0.11	-0.3
1,231,332	-		LRK53_RS05260	0.11	-1.2
1,231,332	-		LRK53_RS05260	0.11	-1.4
1,231,332	-		LRK53_RS05260	0.11	-1.0
1,231,332	-		LRK53_RS05260	0.11	-1.6
1,231,332	-		LRK53_RS05260	0.11	+1.6
1,231,332	-		LRK53_RS05260	0.11	+2.0
1,231,332	-		LRK53_RS05260	0.11	+2.6
1,231,332	-		LRK53_RS05260	0.11	-0.4
1,231,332	-		LRK53_RS05260	0.11	+0.0
1,231,335	+		LRK53_RS05260	0.11	+1.0
1,231,335	+		LRK53_RS05260	0.11	-0.4
1,231,336	-		LRK53_RS05260	0.11	+1.0
1,231,418	+		LRK53_RS05260	0.14	-0.4
1,231,418	+		LRK53_RS05260	0.14	-1.6
1,231,419	-		LRK53_RS05260	0.14	-0.4
1,231,454	+		LRK53_RS05260	0.15	-0.0
1,231,454	+		LRK53_RS05260	0.15	+1.0
1,231,454	+		LRK53_RS05260	0.15	-2.4
1,231,454	+		LRK53_RS05260	0.15	-0.6
1,231,454	+		LRK53_RS05260	0.15	-1.2
1,231,454	+		LRK53_RS05260	0.15	-1.0
1,231,454	+		LRK53_RS05260	0.15	+1.0
1,231,454	+		LRK53_RS05260	0.15	-1.8
1,231,454	+		LRK53_RS05260	0.15	-1.4
1,231,454	+		LRK53_RS05260	0.15	-0.3
1,231,454	+		LRK53_RS05260	0.15	-0.0
1,231,454	+		LRK53_RS05260	0.15	-0.4
1,231,454	+		LRK53_RS05260	0.15	-2.0
1,231,454	+		LRK53_RS05260	0.15	-1.0
1,231,454	+		LRK53_RS05260	0.15	+1.0
1,231,454	+		LRK53_RS05260	0.15	-1.8
1,231,454	+		LRK53_RS05260	0.15	-0.3
1,231,455	-		LRK53_RS05260	0.15	-1.4
1,231,455	-		LRK53_RS05260	0.15	-1.9
1,231,455	-		LRK53_RS05260	0.15	-1.0
1,231,455	-		LRK53_RS05260	0.15	-0.4
1,231,455	-		LRK53_RS05260	0.15	-1.0
1,231,455	-		LRK53_RS05260	0.15	-1.0
1,231,455	-		LRK53_RS05260	0.15	-1.3
1,231,455	-		LRK53_RS05260	0.15	-1.0
1,231,455	-		LRK53_RS05260	0.15	+0.0
1,231,455	-		LRK53_RS05260	0.15	-0.6
1,231,455	-		LRK53_RS05260	0.15	-0.6
1,231,455	-		LRK53_RS05260	0.15	-1.6
1,231,455	-		LRK53_RS05260	0.15	+0.0
1,231,455	-		LRK53_RS05260	0.15	-2.1
1,231,455	-		LRK53_RS05260	0.15	-0.4
1,231,455	-		LRK53_RS05260	0.15	-0.6
1,231,455	-		LRK53_RS05260	0.15	-0.0
1,231,455	-		LRK53_RS05260	0.15	-1.0
1,231,455	-		LRK53_RS05260	0.15	-2.1
1,231,455	-		LRK53_RS05260	0.15	-0.9
1,231,685	+		LRK53_RS05260	0.24	+2.0
1,231,685	+		LRK53_RS05260	0.24	+0.6
1,231,685	+		LRK53_RS05260	0.24	-0.4
1,231,686	-		LRK53_RS05260	0.24	+0.1
1,231,686	-		LRK53_RS05260	0.24	-0.0
1,231,686	-		LRK53_RS05260	0.24	-1.8
1,231,686	-		LRK53_RS05260	0.24	-0.0
1,231,686	-		LRK53_RS05260	0.24	+1.0