Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS13030

Experiment: Survival; Treatment=FW300; TreatmentDuration=2hrs; Outgrowth=R2A_Kan10_Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300; TreatmentDuration=2hrs; Outgrowth=R2A_Kan10_Lactate
2,760,793	+				-2.4
2,760,793	+				+1.9
2,760,798	+				-1.3
2,760,799	-				-2.1
2,760,828	+				-0.3
2,760,866	+				-1.7
2,761,013	+		ABCV34_RS13025	0.20	-0.8
2,761,013	+		ABCV34_RS13025	0.20	-2.3
2,761,013	+		ABCV34_RS13025	0.20	-0.7
2,761,013	+		ABCV34_RS13025	0.20	-1.3
2,761,014	-		ABCV34_RS13025	0.20	-1.4
2,761,014	-		ABCV34_RS13025	0.20	-0.7
2,761,014	-		ABCV34_RS13025	0.20	-1.1
2,761,014	-		ABCV34_RS13025	0.20	+0.1
2,761,020	-		ABCV34_RS13025	0.20	-0.4
2,761,145	+		ABCV34_RS13025	0.34	+2.3
2,761,145	+		ABCV34_RS13025	0.34	-1.3
2,761,145	+		ABCV34_RS13025	0.34	-1.6
2,761,145	+		ABCV34_RS13025	0.34	-0.9
2,761,145	+		ABCV34_RS13025	0.34	-1.7
2,761,146	-		ABCV34_RS13025	0.34	-1.3
2,761,146	-		ABCV34_RS13025	0.34	-1.1
2,761,146	-		ABCV34_RS13025	0.34	-2.4
2,761,146	-		ABCV34_RS13025	0.34	-1.6
2,761,166	+		ABCV34_RS13025	0.36	-2.7
2,761,166	+		ABCV34_RS13025	0.36	+2.2
2,761,166	+		ABCV34_RS13025	0.36	-2.8
2,761,167	-		ABCV34_RS13025	0.36	-1.3
2,761,230	+		ABCV34_RS13025	0.43	+0.6
2,761,230	+		ABCV34_RS13025	0.43	-0.9
2,761,230	+		ABCV34_RS13025	0.43	-2.3
2,761,231	-		ABCV34_RS13025	0.43	+1.4
2,761,231	-		ABCV34_RS13025	0.43	-0.7
2,761,234	+		ABCV34_RS13025	0.43	-1.9
2,761,234	+		ABCV34_RS13025	0.43	-4.0
2,761,234	+		ABCV34_RS13025	0.43	-1.3
2,761,234	+		ABCV34_RS13025	0.43	-1.4
2,761,234	+		ABCV34_RS13025	0.43	+0.3
2,761,234	+		ABCV34_RS13025	0.43	+0.3
2,761,234	+		ABCV34_RS13025	0.43	-0.7
2,761,234	+		ABCV34_RS13025	0.43	+0.5
2,761,234	+		ABCV34_RS13025	0.43	-0.4
2,761,234	+		ABCV34_RS13025	0.43	+0.3
2,761,234	+		ABCV34_RS13025	0.43	-0.3
2,761,235	-		ABCV34_RS13025	0.43	-1.1
2,761,235	-		ABCV34_RS13025	0.43	-0.7
2,761,235	-		ABCV34_RS13025	0.43	-1.9
2,761,235	-		ABCV34_RS13025	0.43	-0.9
2,761,235	-		ABCV34_RS13025	0.43	-0.7
2,761,235	-		ABCV34_RS13025	0.43	-1.3
2,761,235	-		ABCV34_RS13025	0.43	-3.3
2,761,235	-		ABCV34_RS13025	0.43	+0.3
2,761,327	+		ABCV34_RS13025	0.53	+0.9
2,761,327	+		ABCV34_RS13025	0.53	-1.0
2,761,327	+		ABCV34_RS13025	0.53	-1.1
2,761,327	+		ABCV34_RS13025	0.53	-1.6
2,761,328	-		ABCV34_RS13025	0.53	-2.9
2,761,460	+		ABCV34_RS13025	0.67	+0.2
2,761,460	+		ABCV34_RS13025	0.67	+0.3
2,761,460	+		ABCV34_RS13025	0.67	+0.6
2,761,460	+		ABCV34_RS13025	0.67	-0.1
2,761,460	+		ABCV34_RS13025	0.67	-1.1
2,761,460	+		ABCV34_RS13025	0.67	+1.9
2,761,461	-		ABCV34_RS13025	0.67	-0.9
2,761,461	-		ABCV34_RS13025	0.67	-0.9
2,761,461	-		ABCV34_RS13025	0.67	-1.3
2,761,480	-		ABCV34_RS13025	0.69	-2.7
2,761,554	+		ABCV34_RS13025	0.77	+0.3
2,761,554	+		ABCV34_RS13025	0.77	-0.7
2,761,554	+		ABCV34_RS13025	0.77	-0.8
2,761,554	+		ABCV34_RS13025	0.77	-0.1
2,761,554	+		ABCV34_RS13025	0.77	+0.1
2,761,554	+		ABCV34_RS13025	0.77	-0.1
2,761,555	-		ABCV34_RS13025	0.77	-0.1
2,761,568	-		ABCV34_RS13025	0.78	+0.3
2,761,575	+		ABCV34_RS13025	0.79	+0.0
2,761,575	+		ABCV34_RS13025	0.79	-1.7
2,761,575	+		ABCV34_RS13025	0.79	-0.4
2,761,575	+		ABCV34_RS13025	0.79	+1.4
2,761,614	+		ABCV34_RS13025	0.83	+0.3
2,761,739	+				+0.1
2,761,739	+				-1.2
2,761,739	+				+0.5
2,761,739	+				-2.3
2,761,740	-				-1.1
2,761,824	+				-1.3
2,761,824	+				-1.6
2,761,894	+		ABCV34_RS13030	0.22	-0.4
2,761,894	+		ABCV34_RS13030	0.22	+0.1
2,761,894	+		ABCV34_RS13030	0.22	+0.3
2,761,894	+		ABCV34_RS13030	0.22	-1.1
2,761,895	-		ABCV34_RS13030	0.22	-0.9
2,761,895	-		ABCV34_RS13030	0.22	-0.9
2,761,895	-		ABCV34_RS13030	0.22	-0.7
2,761,976	-		ABCV34_RS13030	0.37	-0.7
2,762,176	+		ABCV34_RS13030	0.74	+0.9
2,762,177	-		ABCV34_RS13030	0.74	-0.4
2,762,177	-		ABCV34_RS13030	0.74	+0.9
2,762,177	-		ABCV34_RS13030	0.74	-0.7
2,762,177	-		ABCV34_RS13030	0.74	+2.2
2,762,193	+		ABCV34_RS13030	0.77	+0.3
2,762,193	+		ABCV34_RS13030	0.77	+0.5
2,762,194	-		ABCV34_RS13030	0.77	+1.2
2,762,253	-		ABCV34_RS13030	0.88	+1.9
2,762,253	-		ABCV34_RS13030	0.88	-1.4
2,762,253	-		ABCV34_RS13030	0.88	-0.7
2,762,254	+		ABCV34_RS13030	0.88	+1.9
2,762,254	+		ABCV34_RS13030	0.88	+0.3
2,762,254	+		ABCV34_RS13030	0.88	-0.9
2,762,254	+		ABCV34_RS13030	0.88	-0.7
2,762,254	+		ABCV34_RS13030	0.88	+0.3
2,762,254	+		ABCV34_RS13030	0.88	-0.7
2,762,254	+		ABCV34_RS13030	0.88	+1.9
2,762,254	+		ABCV34_RS13030	0.88	+0.3
2,762,255	-		ABCV34_RS13030	0.88	+1.9
2,762,255	-		ABCV34_RS13030	0.88	+0.9
2,762,255	-		ABCV34_RS13030	0.88	-0.4
2,762,255	-		ABCV34_RS13030	0.88	-1.4
2,762,255	-		ABCV34_RS13030	0.88	-1.4
2,762,358	+				-1.3
2,762,358	+				-0.8
2,762,358	+				-3.3
2,762,358	+				-1.5
2,762,358	+				-1.4
2,762,358	+				+0.2
2,762,358	+				-0.7
2,762,358	+				+0.2
2,762,358	+				-0.6
2,762,358	+				-0.8
2,762,358	+				-3.0
2,762,359	-				-0.5
2,762,359	-				-1.6
2,762,359	-				-0.5
2,762,360	+				-1.9
2,762,360	+				+0.7
2,762,360	+				-1.3
2,762,360	+				-1.7
2,762,360	+				-0.7
2,762,361	-				+1.9
2,762,361	-				-1.4
2,762,361	-				-1.4
2,762,361	-				+0.0
2,762,367	+				-3.1
2,762,367	+				-0.4
2,762,368	-				-2.9
2,762,368	-				-2.6
2,762,368	-				-0.8
2,762,458	+				-1.6
2,762,458	+				-1.6
2,762,458	+				-0.8
2,762,458	+				-2.0
2,762,458	+				+1.6
2,762,458	+				-1.7
2,762,458	+				+1.3
2,762,458	+				-1.8
2,762,458	+				+0.2
2,762,458	+				+0.9
2,762,459	-				-0.4
2,762,459	-				+0.2
2,762,459	-				+1.0
2,762,491	+				-1.1
2,762,491	+				-1.9
2,762,491	+				-3.5
2,762,491	+				+0.6
2,762,491	+				-1.6
2,762,491	+				-0.3
2,762,491	+				+0.3
2,762,548	+				+1.9
2,762,548	+				-0.9
2,762,548	+				+0.9
2,762,549	-				+0.6
2,762,549	-				-0.7
2,762,549	-				-0.6
2,762,558	+				-0.4
2,762,559	-				-2.3
2,762,559	-				+1.7
2,762,656	-				-0.7
2,762,902	+		ABCV34_RS13035	0.18	-2.1
2,762,903	-		ABCV34_RS13035	0.18	-0.1
2,762,999	+		ABCV34_RS13035	0.24	-0.9
2,762,999	+		ABCV34_RS13035	0.24	-0.4
2,762,999	+		ABCV34_RS13035	0.24	-0.1
2,763,000	-		ABCV34_RS13035	0.24	+0.8
2,763,000	-		ABCV34_RS13035	0.24	-2.0
2,763,000	-		ABCV34_RS13035	0.24	-0.9
2,763,000	-		ABCV34_RS13035	0.24	-1.5
2,763,121	+		ABCV34_RS13035	0.31	-3.0
2,763,122	-		ABCV34_RS13035	0.31	-2.5
2,763,122	-		ABCV34_RS13035	0.31	-0.4