Experiment: Cobalt chloride 0.04 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0471 and Ga0059261_0472 are separated by 19 nucleotides Ga0059261_0472 and Ga0059261_0473 are separated by 150 nucleotides Ga0059261_0473 and Ga0059261_0474 overlap by 4 nucleotides Ga0059261_0474 and Ga0059261_0475 are separated by 7 nucleotides
Ga0059261_0471: Ga0059261_0471 - Uncharacterized protein involved in copper resistance, at 459,646 to 460,626
_0471
Ga0059261_0472: Ga0059261_0472 - Predicted metal-binding protein, at 460,646 to 461,098
_0472
Ga0059261_0473: Ga0059261_0473 - Predicted Fe-S protein, at 461,249 to 461,427
_0473
Ga0059261_0474: Ga0059261_0474 - cation diffusion facilitator family transporter, at 461,424 to 462,368
_0474
Ga0059261_0475: Ga0059261_0475 - Uncharacterized protein conserved in bacteria, at 462,376 to 462,651
_0475
Position (kb) 461
462
463 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 460.513 kb on + strand, within Ga0059261_0471 at 460.513 kb on + strand, within Ga0059261_0471 at 460.513 kb on + strand, within Ga0059261_0471 at 460.513 kb on + strand, within Ga0059261_0471 at 460.514 kb on - strand, within Ga0059261_0471 at 460.514 kb on - strand, within Ga0059261_0471 at 460.514 kb on - strand, within Ga0059261_0471 at 460.514 kb on - strand, within Ga0059261_0471 at 460.514 kb on - strand, within Ga0059261_0471 at 460.514 kb on - strand, within Ga0059261_0471 at 460.514 kb on - strand, within Ga0059261_0471 at 460.515 kb on + strand, within Ga0059261_0471 at 460.515 kb on + strand, within Ga0059261_0471 at 460.515 kb on + strand, within Ga0059261_0471 at 460.528 kb on + strand, within Ga0059261_0471 at 460.528 kb on + strand, within Ga0059261_0471 at 460.529 kb on - strand at 460.529 kb on - strand at 460.529 kb on - strand at 460.641 kb on + strand at 460.641 kb on + strand at 460.641 kb on + strand at 460.642 kb on - strand at 460.738 kb on - strand, within Ga0059261_0472 at 460.738 kb on - strand, within Ga0059261_0472 at 460.738 kb on - strand, within Ga0059261_0472 at 461.023 kb on - strand, within Ga0059261_0472 at 461.023 kb on - strand, within Ga0059261_0472 at 461.045 kb on + strand, within Ga0059261_0472 at 461.045 kb on + strand, within Ga0059261_0472 at 461.096 kb on + strand at 461.096 kb on + strand at 461.096 kb on + strand at 461.097 kb on - strand at 461.097 kb on - strand at 461.149 kb on + strand at 461.149 kb on + strand at 461.149 kb on + strand at 461.150 kb on - strand at 461.150 kb on - strand at 461.150 kb on - strand at 461.165 kb on + strand at 461.165 kb on + strand at 461.166 kb on - strand at 461.166 kb on - strand at 461.191 kb on + strand at 461.191 kb on + strand at 461.193 kb on + strand at 461.193 kb on + strand at 461.193 kb on + strand at 461.193 kb on + strand at 461.193 kb on + strand at 461.193 kb on + strand at 461.194 kb on - strand at 461.194 kb on - strand at 461.194 kb on - strand at 461.194 kb on - strand at 461.194 kb on - strand at 461.194 kb on - strand at 461.194 kb on - strand at 461.219 kb on + strand at 461.220 kb on - strand at 461.234 kb on + strand at 461.234 kb on + strand at 461.237 kb on + strand at 461.237 kb on + strand at 461.237 kb on + strand at 461.238 kb on - strand at 461.251 kb on - strand at 461.303 kb on + strand, within Ga0059261_0473 at 461.303 kb on + strand, within Ga0059261_0473 at 461.303 kb on + strand, within Ga0059261_0473 at 461.303 kb on + strand, within Ga0059261_0473 at 461.304 kb on - strand, within Ga0059261_0473 at 461.304 kb on - strand, within Ga0059261_0473 at 461.359 kb on - strand, within Ga0059261_0473 at 461.440 kb on + strand at 461.441 kb on + strand at 461.441 kb on + strand at 461.441 kb on + strand at 461.441 kb on + strand at 461.441 kb on + strand at 461.442 kb on - strand at 461.442 kb on - strand at 461.442 kb on - strand at 461.442 kb on - strand at 461.442 kb on - strand at 461.442 kb on - strand at 461.442 kb on - strand at 461.442 kb on - strand at 461.520 kb on + strand, within Ga0059261_0474 at 461.520 kb on + strand, within Ga0059261_0474 at 461.520 kb on + strand, within Ga0059261_0474 at 461.520 kb on + strand, within Ga0059261_0474 at 461.520 kb on + strand, within Ga0059261_0474 at 461.521 kb on - strand, within Ga0059261_0474 at 461.521 kb on - strand, within Ga0059261_0474 at 461.521 kb on - strand, within Ga0059261_0474 at 461.521 kb on - strand, within Ga0059261_0474 at 461.521 kb on - strand, within Ga0059261_0474 at 461.521 kb on - strand, within Ga0059261_0474 at 461.521 kb on - strand, within Ga0059261_0474 at 461.521 kb on - strand, within Ga0059261_0474 at 461.521 kb on - strand, within Ga0059261_0474 at 461.658 kb on - strand, within Ga0059261_0474 at 461.709 kb on - strand, within Ga0059261_0474 at 461.744 kb on - strand, within Ga0059261_0474 at 461.744 kb on - strand, within Ga0059261_0474 at 461.744 kb on - strand, within Ga0059261_0474 at 461.768 kb on + strand, within Ga0059261_0474 at 461.810 kb on - strand, within Ga0059261_0474 at 461.810 kb on - strand, within Ga0059261_0474 at 461.825 kb on + strand, within Ga0059261_0474 at 461.825 kb on + strand, within Ga0059261_0474 at 461.826 kb on - strand, within Ga0059261_0474 at 461.826 kb on - strand, within Ga0059261_0474 at 461.828 kb on + strand, within Ga0059261_0474 at 461.828 kb on + strand, within Ga0059261_0474 at 461.828 kb on + strand, within Ga0059261_0474 at 461.828 kb on + strand, within Ga0059261_0474 at 461.829 kb on - strand, within Ga0059261_0474 at 461.829 kb on - strand, within Ga0059261_0474 at 461.829 kb on - strand, within Ga0059261_0474 at 461.940 kb on - strand, within Ga0059261_0474 at 462.004 kb on + strand, within Ga0059261_0474 at 462.005 kb on - strand, within Ga0059261_0474 at 462.036 kb on + strand, within Ga0059261_0474 at 462.099 kb on - strand, within Ga0059261_0474 at 462.110 kb on - strand at 462.110 kb on - strand, within Ga0059261_0474 at 462.110 kb on - strand, within Ga0059261_0474 at 462.110 kb on - strand, within Ga0059261_0474 at 462.139 kb on + strand, within Ga0059261_0474 at 462.140 kb on - strand, within Ga0059261_0474 at 462.140 kb on - strand, within Ga0059261_0474 at 462.140 kb on - strand, within Ga0059261_0474 at 462.145 kb on + strand, within Ga0059261_0474 at 462.145 kb on + strand, within Ga0059261_0474 at 462.145 kb on + strand, within Ga0059261_0474 at 462.145 kb on + strand, within Ga0059261_0474 at 462.145 kb on + strand, within Ga0059261_0474 at 462.145 kb on + strand, within Ga0059261_0474 at 462.145 kb on + strand, within Ga0059261_0474 at 462.145 kb on + strand, within Ga0059261_0474 at 462.145 kb on + strand, within Ga0059261_0474 at 462.145 kb on + strand, within Ga0059261_0474 at 462.146 kb on - strand, within Ga0059261_0474 at 462.146 kb on - strand, within Ga0059261_0474 at 462.146 kb on - strand, within Ga0059261_0474 at 462.146 kb on - strand, within Ga0059261_0474 at 462.146 kb on - strand, within Ga0059261_0474 at 462.146 kb on - strand, within Ga0059261_0474 at 462.146 kb on - strand, within Ga0059261_0474 at 462.146 kb on - strand, within Ga0059261_0474 at 462.146 kb on - strand, within Ga0059261_0474 at 462.150 kb on + strand at 462.151 kb on - strand, within Ga0059261_0474 at 462.188 kb on + strand, within Ga0059261_0474 at 462.189 kb on - strand, within Ga0059261_0474 at 462.215 kb on + strand, within Ga0059261_0474 at 462.215 kb on + strand, within Ga0059261_0474 at 462.215 kb on + strand, within Ga0059261_0474 at 462.215 kb on + strand, within Ga0059261_0474 at 462.216 kb on - strand, within Ga0059261_0474 at 462.216 kb on - strand, within Ga0059261_0474 at 462.216 kb on - strand, within Ga0059261_0474 at 462.230 kb on - strand, within Ga0059261_0474 at 462.237 kb on + strand, within Ga0059261_0474 at 462.237 kb on + strand, within Ga0059261_0474 at 462.299 kb on + strand at 462.299 kb on + strand at 462.299 kb on + strand at 462.299 kb on + strand at 462.300 kb on - strand at 462.369 kb on + strand at 462.369 kb on + strand at 462.369 kb on + strand at 462.369 kb on + strand at 462.369 kb on + strand at 462.369 kb on + strand at 462.369 kb on + strand at 462.369 kb on + strand at 462.370 kb on - strand at 462.370 kb on - strand at 462.370 kb on - strand at 462.370 kb on - strand at 462.370 kb on - strand at 462.372 kb on + strand at 462.373 kb on - strand at 462.373 kb on - strand at 462.373 kb on - strand at 462.377 kb on + strand at 462.378 kb on - strand at 462.387 kb on - strand at 462.387 kb on - strand at 462.607 kb on + strand, within Ga0059261_0475 at 462.608 kb on - strand, within Ga0059261_0475 at 462.640 kb on + strand at 462.641 kb on - strand at 462.670 kb on - strand at 462.687 kb on + strand at 462.687 kb on + strand at 462.688 kb on - strand at 462.688 kb on - strand at 462.760 kb on + strand at 462.760 kb on + strand at 462.760 kb on + strand at 462.760 kb on + strand at 462.760 kb on + strand at 462.761 kb on - strand at 462.761 kb on - strand at 462.761 kb on - strand at 462.761 kb on - strand at 462.766 kb on + strand at 462.766 kb on + strand at 462.766 kb on + strand at 462.767 kb on - strand at 462.838 kb on + strand at 462.838 kb on + strand at 462.839 kb on - strand at 462.839 kb on - strand at 462.849 kb on - strand at 462.853 kb on + strand at 462.853 kb on + strand at 462.854 kb on - strand at 462.854 kb on - strand at 462.923 kb on - strand at 462.925 kb on + strand at 462.966 kb on + strand at 462.966 kb on + strand at 462.966 kb on + strand at 462.967 kb on - strand at 462.967 kb on - strand at 463.017 kb on + strand at 463.063 kb on + strand at 463.063 kb on + strand at 463.072 kb on + strand at 463.091 kb on + strand at 463.092 kb on - strand at 463.092 kb on - strand at 463.092 kb on - strand at 463.117 kb on + strand at 463.117 kb on + strand at 463.118 kb on - strand at 463.118 kb on - strand at 463.177 kb on + strand at 463.177 kb on + strand at 463.177 kb on + strand at 463.177 kb on + strand at 463.177 kb on + strand at 463.177 kb on + strand at 463.178 kb on - strand at 463.178 kb on - strand at 463.178 kb on - strand at 463.178 kb on - strand at 463.178 kb on - strand at 463.178 kb on - strand at 463.178 kb on - strand at 463.178 kb on - strand at 463.196 kb on + strand at 463.196 kb on + strand at 463.197 kb on - strand at 463.227 kb on + strand at 463.227 kb on + strand at 463.239 kb on - strand at 463.282 kb on + strand at 463.283 kb on - strand at 463.355 kb on + strand at 463.356 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.04 mM remove 460,513 + Ga0059261_0471 0.88 -0.4 460,513 + Ga0059261_0471 0.88 +0.3 460,513 + Ga0059261_0471 0.88 +0.3 460,513 + Ga0059261_0471 0.88 +0.8 460,514 - Ga0059261_0471 0.88 +0.7 460,514 - Ga0059261_0471 0.88 -0.6 460,514 - Ga0059261_0471 0.88 +0.2 460,514 - Ga0059261_0471 0.88 -0.6 460,514 - Ga0059261_0471 0.88 -0.3 460,514 - Ga0059261_0471 0.88 +0.5 460,514 - Ga0059261_0471 0.88 -0.4 460,515 + Ga0059261_0471 0.89 +0.3 460,515 + Ga0059261_0471 0.89 -1.1 460,515 + Ga0059261_0471 0.89 -1.1 460,528 + Ga0059261_0471 0.90 +0.5 460,528 + Ga0059261_0471 0.90 -0.3 460,529 - -0.6 460,529 - +0.4 460,529 - -0.1 460,641 + -0.7 460,641 + +0.4 460,641 + +0.6 460,642 - +0.4 460,738 - Ga0059261_0472 0.20 +0.2 460,738 - Ga0059261_0472 0.20 +0.2 460,738 - Ga0059261_0472 0.20 -1.4 461,023 - Ga0059261_0472 0.83 -1.4 461,023 - Ga0059261_0472 0.83 +0.7 461,045 + Ga0059261_0472 0.88 -0.5 461,045 + Ga0059261_0472 0.88 -0.2 461,096 + -0.3 461,096 + -0.1 461,096 + -0.9 461,097 - +0.0 461,097 - -0.7 461,149 + -0.1 461,149 + -0.4 461,149 + +0.1 461,150 - +0.3 461,150 - +0.4 461,150 - -1.2 461,165 + +0.0 461,165 + -0.9 461,166 - -0.5 461,166 - +0.0 461,191 + -0.3 461,191 + -0.5 461,193 + +0.6 461,193 + +0.2 461,193 + +0.6 461,193 + +0.3 461,193 + -0.2 461,193 + -1.1 461,194 - -0.2 461,194 - +0.7 461,194 - +0.7 461,194 - -0.1 461,194 - -0.5 461,194 - +0.9 461,194 - -0.9 461,219 + +0.2 461,220 - -0.2 461,234 + -0.1 461,234 + -0.0 461,237 + +0.1 461,237 + -0.1 461,237 + +0.3 461,238 - +1.1 461,251 - +0.0 461,303 + Ga0059261_0473 0.30 -0.8 461,303 + Ga0059261_0473 0.30 -0.0 461,303 + Ga0059261_0473 0.30 +0.0 461,303 + Ga0059261_0473 0.30 -0.5 461,304 - Ga0059261_0473 0.31 -1.4 461,304 - Ga0059261_0473 0.31 -0.3 461,359 - Ga0059261_0473 0.61 -0.4 461,440 + -1.1 461,441 + -1.8 461,441 + -1.1 461,441 + -2.0 461,441 + -1.6 461,441 + -2.4 461,442 - -0.9 461,442 - -2.1 461,442 - -1.6 461,442 - -1.7 461,442 - -1.8 461,442 - -1.3 461,442 - -1.8 461,442 - -1.5 461,520 + Ga0059261_0474 0.10 -1.0 461,520 + Ga0059261_0474 0.10 -1.8 461,520 + Ga0059261_0474 0.10 -2.2 461,520 + Ga0059261_0474 0.10 -1.9 461,520 + Ga0059261_0474 0.10 -2.5 461,521 - Ga0059261_0474 0.10 -0.8 461,521 - Ga0059261_0474 0.10 -0.9 461,521 - Ga0059261_0474 0.10 -1.2 461,521 - Ga0059261_0474 0.10 -3.0 461,521 - Ga0059261_0474 0.10 -2.8 461,521 - Ga0059261_0474 0.10 -2.5 461,521 - Ga0059261_0474 0.10 -2.0 461,521 - Ga0059261_0474 0.10 -1.7 461,521 - Ga0059261_0474 0.10 -2.9 461,658 - Ga0059261_0474 0.25 -2.1 461,709 - Ga0059261_0474 0.30 -1.9 461,744 - Ga0059261_0474 0.34 -0.6 461,744 - Ga0059261_0474 0.34 -2.2 461,744 - Ga0059261_0474 0.34 -1.9 461,768 + Ga0059261_0474 0.36 -2.0 461,810 - Ga0059261_0474 0.41 -1.8 461,810 - Ga0059261_0474 0.41 -1.4 461,825 + Ga0059261_0474 0.42 -2.0 461,825 + Ga0059261_0474 0.42 -1.5 461,826 - Ga0059261_0474 0.43 -2.4 461,826 - Ga0059261_0474 0.43 -1.0 461,828 + Ga0059261_0474 0.43 -1.2 461,828 + Ga0059261_0474 0.43 -2.3 461,828 + Ga0059261_0474 0.43 -1.8 461,828 + Ga0059261_0474 0.43 -1.2 461,829 - Ga0059261_0474 0.43 -2.9 461,829 - Ga0059261_0474 0.43 -3.1 461,829 - Ga0059261_0474 0.43 -0.9 461,940 - Ga0059261_0474 0.55 -1.6 462,004 + Ga0059261_0474 0.61 -1.2 462,005 - Ga0059261_0474 0.61 -1.5 462,036 + Ga0059261_0474 0.65 -0.5 462,099 - Ga0059261_0474 0.71 -2.8 462,110 - -0.5 462,110 - Ga0059261_0474 0.73 -1.0 462,110 - Ga0059261_0474 0.73 -2.1 462,110 - Ga0059261_0474 0.73 -1.5 462,139 + Ga0059261_0474 0.76 -1.0 462,140 - Ga0059261_0474 0.76 -3.3 462,140 - Ga0059261_0474 0.76 -1.2 462,140 - Ga0059261_0474 0.76 -2.5 462,145 + Ga0059261_0474 0.76 -1.7 462,145 + Ga0059261_0474 0.76 -1.2 462,145 + Ga0059261_0474 0.76 -0.7 462,145 + Ga0059261_0474 0.76 -1.6 462,145 + Ga0059261_0474 0.76 -1.4 462,145 + Ga0059261_0474 0.76 -0.1 462,145 + Ga0059261_0474 0.76 -1.8 462,145 + Ga0059261_0474 0.76 -0.4 462,145 + Ga0059261_0474 0.76 -2.9 462,145 + Ga0059261_0474 0.76 -2.2 462,146 - Ga0059261_0474 0.76 -2.2 462,146 - Ga0059261_0474 0.76 -3.7 462,146 - Ga0059261_0474 0.76 -1.9 462,146 - Ga0059261_0474 0.76 -2.2 462,146 - Ga0059261_0474 0.76 -1.9 462,146 - Ga0059261_0474 0.76 -1.5 462,146 - Ga0059261_0474 0.76 -2.6 462,146 - Ga0059261_0474 0.76 -2.6 462,146 - Ga0059261_0474 0.76 -1.9 462,150 + +0.7 462,151 - Ga0059261_0474 0.77 -0.6 462,188 + Ga0059261_0474 0.81 -1.8 462,189 - Ga0059261_0474 0.81 -0.7 462,215 + Ga0059261_0474 0.84 -2.4 462,215 + Ga0059261_0474 0.84 -2.1 462,215 + Ga0059261_0474 0.84 -1.6 462,215 + Ga0059261_0474 0.84 -2.1 462,216 - Ga0059261_0474 0.84 -0.9 462,216 - Ga0059261_0474 0.84 -2.0 462,216 - Ga0059261_0474 0.84 +0.1 462,230 - Ga0059261_0474 0.85 -2.5 462,237 + Ga0059261_0474 0.86 -2.6 462,237 + Ga0059261_0474 0.86 -2.0 462,299 + -1.6 462,299 + -0.9 462,299 + -2.1 462,299 + -1.1 462,300 - -2.1 462,369 + +0.5 462,369 + -2.3 462,369 + -0.6 462,369 + -1.3 462,369 + -3.2 462,369 + -1.4 462,369 + -2.0 462,369 + -1.6 462,370 - -1.9 462,370 - -0.9 462,370 - -2.4 462,370 - -2.7 462,370 - -2.2 462,372 + -2.3 462,373 - -1.0 462,373 - -1.4 462,373 - -2.2 462,377 + -0.8 462,378 - -1.6 462,387 - -0.1 462,387 - -0.4 462,607 + Ga0059261_0475 0.84 -0.8 462,608 - Ga0059261_0475 0.84 -0.6 462,640 + -1.2 462,641 - -1.7 462,670 - -0.8 462,687 + -1.5 462,687 + -1.2 462,688 - -0.1 462,688 - -1.7 462,760 + -0.2 462,760 + +0.6 462,760 + +0.4 462,760 + +0.2 462,760 + -0.2 462,761 - +0.1 462,761 - +0.3 462,761 - +0.5 462,761 - +0.2 462,766 + -0.4 462,766 + -0.6 462,766 + -0.5 462,767 - +0.4 462,838 + -0.2 462,838 + -0.4 462,839 - +0.1 462,839 - +0.2 462,849 - +0.0 462,853 + +0.2 462,853 + -0.3 462,854 - +0.1 462,854 - -0.2 462,923 - +0.3 462,925 + +0.5 462,966 + -0.3 462,966 + -0.5 462,966 + -0.2 462,967 - -0.1 462,967 - +1.4 463,017 + -0.3 463,063 + +0.3 463,063 + -0.5 463,072 + -0.4 463,091 + -0.4 463,092 - -0.6 463,092 - +0.3 463,092 - -0.6 463,117 + -1.9 463,117 + -1.1 463,118 - -0.1 463,118 - -0.9 463,177 + +0.3 463,177 + +0.4 463,177 + +0.9 463,177 + +0.2 463,177 + +0.4 463,177 + +0.4 463,178 - -0.9 463,178 - -1.0 463,178 - -0.2 463,178 - -0.1 463,178 - +0.0 463,178 - -0.6 463,178 - -0.1 463,178 - -0.9 463,196 + -0.6 463,196 + -0.1 463,197 - +0.6 463,227 + -0.4 463,227 + +0.2 463,239 - -0.4 463,282 + -0.3 463,283 - -1.1 463,355 + +1.1 463,356 - -0.6
Or see this region's nucleotide sequence