Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_09345

Experiment: Spectinomycin 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.2 mg/ml
2,048,280	+		AO353_09340	0.58	-0.8
2,048,280	+		AO353_09340	0.58	-0.2
2,048,280	+		AO353_09340	0.58	-1.5
2,048,353	+		AO353_09340	0.87	-1.5
2,048,353	+		AO353_09340	0.87	+1.3
2,048,353	+		AO353_09340	0.87	-1.5
2,048,354	-		AO353_09340	0.88	+0.7
2,048,382	+				-1.9
2,048,382	+				-0.1
2,048,382	+				-1.1
2,048,383	-				+0.6
2,048,383	-				+0.8
2,048,383	-				+0.1
2,048,395	+				+0.7
2,048,396	-				-0.1
2,048,399	+				+1.4
2,048,399	+				-1.9
2,048,423	-				+0.1
2,048,423	-				+0.0
2,048,495	-				-0.0
2,048,513	+				+0.2
2,048,513	+				+0.1
2,048,514	-				-0.1
2,048,542	+				-0.0
2,048,542	+				+1.2
2,048,543	-				-0.6
2,048,543	-				-1.2
2,048,592	+				-1.9
2,048,592	+				-0.2
2,048,592	+				+1.2
2,048,592	+				+2.2
2,048,592	+				-1.8
2,048,592	+				-0.9
2,048,592	+				+1.3
2,048,592	+				-0.2
2,048,592	+				+0.4
2,048,592	+				-2.8
2,048,592	+				-0.1
2,048,592	+				-0.5
2,048,592	+				-0.1
2,048,592	+				-1.2
2,048,592	+				+0.2
2,048,592	+				-0.5
2,048,592	+				-2.4
2,048,592	+				-0.4
2,048,592	+				+0.8
2,048,592	+				-1.5
2,048,592	+				+0.2
2,048,592	+				-0.7
2,048,592	+				+0.6
2,048,592	+				+0.6
2,048,592	+				+2.7
2,048,592	+				-0.8
2,048,592	+				+0.4
2,048,593	-				-0.0
2,048,593	-				-0.1
2,048,593	-				-1.0
2,048,593	-				-0.9
2,048,593	-				+0.6
2,048,593	-				+2.4
2,048,593	-				+0.4
2,048,593	-				+2.4
2,048,593	-				-0.1
2,048,593	-				-1.4
2,048,593	-				-1.6
2,048,593	-				-0.3
2,048,593	-				+0.6
2,048,593	-				+0.3
2,048,593	-				+0.4
2,048,593	-				+1.4
2,048,593	-				-1.5
2,048,593	-				+0.8
2,048,593	-				-1.0
2,048,593	-				+0.5
2,048,593	-				+0.2
2,048,593	-				-2.2
2,048,593	-				-0.5
2,048,593	-				-0.6
2,048,593	-				+1.0
2,048,593	-				-2.0
2,048,593	-				+1.6
2,048,593	-				+0.4
2,048,593	-				-0.6
2,048,593	-				+0.2
2,048,593	-				-1.2
2,048,709	+		AO353_09345	0.12	+0.0
2,048,710	-		AO353_09345	0.13	+0.3
2,048,959	-		AO353_09345	0.76	-0.4
2,048,959	-		AO353_09345	0.76	-0.8
2,048,959	-		AO353_09345	0.76	-1.5
2,048,959	-		AO353_09345	0.76	-0.2
2,049,041	+				-1.0
2,049,041	+				+1.2
2,049,041	+				-0.2
2,049,041	+				+1.5
2,049,041	+				+1.1
2,049,042	-				-0.4
2,049,042	-				-1.6
2,049,042	-				+0.2
2,049,042	-				+0.2
2,049,048	+				+0.3
2,049,048	+				+0.7
2,049,048	+				+2.0
2,049,048	+				-0.4
2,049,048	+				-0.6
2,049,048	+				-0.5
2,049,049	-				-1.5
2,049,049	-				+0.6
2,049,049	-				+1.1
2,049,049	-				+0.9
2,049,049	-				+0.6
2,049,206	+				-1.0
2,049,206	+				-0.0
2,049,206	+				+0.3
2,049,207	-				-1.6
2,049,207	-				-0.3
2,049,212	+				+0.9
2,049,212	+				-0.1
2,049,212	+				+0.3
2,049,212	+				+2.8
2,049,212	+				-0.6
2,049,213	-				-1.6
2,049,213	-				+0.8
2,049,213	-				-1.4
2,049,213	-				+0.7
2,049,213	-				-0.8
2,049,259	+		AO353_09350	0.19	-1.4
2,049,259	+		AO353_09350	0.19	+0.6
2,049,259	+		AO353_09350	0.19	-1.1
2,049,259	+		AO353_09350	0.19	-0.5
2,049,259	+		AO353_09350	0.19	+1.2
2,049,259	+		AO353_09350	0.19	-0.8
2,049,259	+		AO353_09350	0.19	+0.4
2,049,259	+		AO353_09350	0.19	+0.0
2,049,260	-		AO353_09350	0.19	-0.1
2,049,260	-		AO353_09350	0.19	-1.6
2,049,260	-		AO353_09350	0.19	-1.5
2,049,260	-		AO353_09350	0.19	+0.4
2,049,260	-		AO353_09350	0.19	-1.2
2,049,260	-		AO353_09350	0.19	-0.2
2,049,308	+		AO353_09350	0.28	-0.2
2,049,308	+		AO353_09350	0.28	+0.0
2,049,308	+		AO353_09350	0.28	+1.0
2,049,308	+		AO353_09350	0.28	-1.2
2,049,308	+		AO353_09350	0.28	+1.2
2,049,308	+		AO353_09350	0.28	+0.7
2,049,308	+		AO353_09350	0.28	+0.5
2,049,308	+		AO353_09350	0.28	+1.0
2,049,308	+		AO353_09350	0.28	-1.1
2,049,309	-		AO353_09350	0.28	-1.5
2,049,309	-		AO353_09350	0.28	+0.5
2,049,309	-		AO353_09350	0.28	+2.5
2,049,333	+		AO353_09350	0.33	+0.1
2,049,333	+		AO353_09350	0.33	-1.4
2,049,333	+		AO353_09350	0.33	+0.2
2,049,334	-		AO353_09350	0.33	+0.4
2,049,334	-		AO353_09350	0.33	-0.6
2,049,334	-		AO353_09350	0.33	+0.4
2,049,334	-		AO353_09350	0.33	+0.6
2,049,354	+		AO353_09350	0.37	-1.5
2,049,354	+		AO353_09350	0.37	+0.9
2,049,354	+		AO353_09350	0.37	+1.1
2,049,354	+		AO353_09350	0.37	-0.7
2,049,354	+		AO353_09350	0.37	-0.3
2,049,354	+		AO353_09350	0.37	-0.8
2,049,354	+		AO353_09350	0.37	-1.0
2,049,354	+		AO353_09350	0.37	-1.6
2,049,354	+		AO353_09350	0.37	+0.3
2,049,355	-		AO353_09350	0.37	-1.1
2,049,355	-		AO353_09350	0.37	+0.4
2,049,355	-		AO353_09350	0.37	-0.6
2,049,355	-		AO353_09350	0.37	+2.2
2,049,355	-		AO353_09350	0.37	+1.6
2,049,408	+		AO353_09350	0.48	+0.1
2,049,408	+		AO353_09350	0.48	+0.2
2,049,409	-		AO353_09350	0.48	-0.9
2,049,409	-		AO353_09350	0.48	-0.1
2,049,409	-		AO353_09350	0.48	+1.7
2,049,413	+		AO353_09350	0.49	+0.6
2,049,414	-		AO353_09350	0.49	-0.2
2,049,419	+		AO353_09350	0.50	-0.6
2,049,419	+		AO353_09350	0.50	-1.7
2,049,419	+		AO353_09350	0.50	-1.9
2,049,420	-		AO353_09350	0.50	-1.5
2,049,420	-		AO353_09350	0.50	+0.9
2,049,556	-		AO353_09350	0.77	-2.6
2,049,556	-		AO353_09350	0.77	+0.7
2,049,587	+		AO353_09350	0.83	+1.2
2,049,587	+		AO353_09350	0.83	-0.8
2,049,587	+		AO353_09350	0.83	-0.4
2,049,587	+		AO353_09350	0.83	-0.3
2,049,588	-		AO353_09350	0.83	-1.8
2,049,588	-		AO353_09350	0.83	+0.4
2,049,659	-				-1.2
2,049,690	+				-0.6
2,049,691	-				+2.2
2,049,691	-				+0.8
2,049,691	-				-0.3
2,049,712	+				+2.2
2,049,741	+				-0.6
2,049,741	+				-2.0
2,049,741	+				-0.4
2,049,742	-				-0.2
2,049,791	+				+0.0
2,049,791	+				+1.5
2,049,792	-				+0.8
2,049,792	-				-0.4
2,049,792	-				+0.4
2,049,792	-				-2.2
2,049,792	-				-0.0
2,049,981	+				+1.7
2,050,041	+				+0.2
2,050,041	+				+0.2
2,050,041	+				+1.4
2,050,041	+				+2.2
2,050,042	-				-1.4
2,050,042	-				-1.0
2,050,042	-				+0.1
2,050,042	-				-2.0
2,050,042	-				+0.2
2,050,042	-				+0.4