Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_3034 and DvMF_3035 are separated by 780 nucleotides DvMF_3035 and DvMF_R0078 are separated by 533 nucleotides DvMF_R0078 and DvMF_3036 are separated by 86 nucleotides
DvMF_3034: DvMF_3034 - 5,10-methylenetetrahydrofolate reductase (RefSeq), at 3,828,930 to 3,829,805
_3034
DvMF_3035: DvMF_3035 - glycosyl transferase family 9 (RefSeq), at 3,830,586 to 3,831,611
_3035
DvMF_R0078: DvMF_R0078 - tRNA-Lys (RefSeq), at 3,832,145 to 3,832,220
_R0078
DvMF_3036: DvMF_3036 - cytochrome c biogenesis protein transmembrane region (RefSeq), at 3,832,307 to 3,834,502
_3036
Position (kb)
3830
3831
3832 Strain fitness (log2 ratio)
-2
-1
0
1 at 3829.740 kb on + strand at 3829.878 kb on + strand at 3829.900 kb on + strand at 3830.122 kb on + strand at 3830.159 kb on + strand at 3830.319 kb on - strand at 3830.339 kb on - strand at 3830.480 kb on - strand at 3830.493 kb on + strand at 3830.530 kb on - strand at 3830.769 kb on + strand, within DvMF_3035 at 3830.927 kb on - strand, within DvMF_3035 at 3831.043 kb on - strand, within DvMF_3035 at 3831.227 kb on + strand, within DvMF_3035 at 3831.485 kb on - strand, within DvMF_3035 at 3831.583 kb on - strand at 3831.666 kb on - strand at 3831.760 kb on - strand at 3831.946 kb on + strand at 3832.371 kb on - strand at 3832.527 kb on - strand, within DvMF_3036
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 3,829,740 + -1.3 3,829,878 + -0.1 3,829,900 + -0.3 3,830,122 + -0.4 3,830,159 + -0.5 3,830,319 - -0.8 3,830,339 - -1.3 3,830,480 - +0.7 3,830,493 + +0.0 3,830,530 - -0.6 3,830,769 + DvMF_3035 0.18 -0.2 3,830,927 - DvMF_3035 0.33 -1.2 3,831,043 - DvMF_3035 0.45 -1.9 3,831,227 + DvMF_3035 0.62 +1.4 3,831,485 - DvMF_3035 0.88 -1.6 3,831,583 - -0.1 3,831,666 - +0.1 3,831,760 - -0.4 3,831,946 + -0.2 3,832,371 - -0.5 3,832,527 - DvMF_3036 0.10 -0.2
Or see this region's nucleotide sequence