Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2687 and DvMF_2688 are separated by 9 nucleotides DvMF_2688 and DvMF_2689 are separated by 12 nucleotides DvMF_2689 and DvMF_2690 are separated by 12 nucleotides DvMF_2690 and DvMF_2691 are separated by 165 nucleotides
DvMF_2687: DvMF_2687 - Polysulphide reductase NrfD (RefSeq), at 3,399,310 to 3,400,563
_2687
DvMF_2688: DvMF_2688 - 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq), at 3,400,573 to 3,401,340
_2688
DvMF_2689: DvMF_2689 - molybdopterin oxidoreductase (RefSeq), at 3,401,353 to 3,403,428
_2689
DvMF_2690: DvMF_2690 - hypothetical protein (RefSeq), at 3,403,441 to 3,404,076
_2690
DvMF_2691: DvMF_2691 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (RefSeq), at 3,404,242 to 3,405,747
_2691
Position (kb)
3401
3402
3403
3404 Strain fitness (log2 ratio)
-2
-1
0
1 at 3400.412 kb on - strand, within DvMF_2687 at 3400.585 kb on - strand at 3400.585 kb on - strand at 3400.661 kb on + strand, within DvMF_2688 at 3400.661 kb on + strand, within DvMF_2688 at 3401.351 kb on + strand at 3401.532 kb on + strand at 3402.184 kb on - strand, within DvMF_2689 at 3402.306 kb on - strand, within DvMF_2689 at 3402.466 kb on + strand, within DvMF_2689 at 3402.688 kb on + strand, within DvMF_2689 at 3402.696 kb on - strand, within DvMF_2689 at 3403.857 kb on + strand, within DvMF_2690 at 3403.865 kb on - strand, within DvMF_2690 at 3404.086 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 3,400,412 - DvMF_2687 0.88 +0.4 3,400,585 - -0.4 3,400,585 - -0.1 3,400,661 + DvMF_2688 0.11 -0.0 3,400,661 + DvMF_2688 0.11 -0.9 3,401,351 + -0.9 3,401,532 + +0.2 3,402,184 - DvMF_2689 0.40 -1.6 3,402,306 - DvMF_2689 0.46 -0.5 3,402,466 + DvMF_2689 0.54 -1.3 3,402,688 + DvMF_2689 0.64 -0.9 3,402,696 - DvMF_2689 0.65 -2.5 3,403,857 + DvMF_2690 0.65 +0.2 3,403,865 - DvMF_2690 0.67 -1.2 3,404,086 - -0.9
Or see this region's nucleotide sequence