Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2121 and DvMF_2122 are separated by 345 nucleotides DvMF_2122 and DvMF_2123 are separated by 384 nucleotides
DvMF_2121: DvMF_2121 - 2-alkenal reductase (RefSeq), at 2,638,796 to 2,640,373
_2121
DvMF_2122: DvMF_2122 - nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase (RefSeq), at 2,640,719 to 2,641,798
_2122
DvMF_2123: DvMF_2123 - chromosome replication initiation inhibitor protein (RefSeq), at 2,642,183 to 2,643,145
_2123
Position (kb)
2640
2641
2642 Strain fitness (log2 ratio)
-1
0
1 at 2639.848 kb on - strand, within DvMF_2121 at 2639.858 kb on - strand, within DvMF_2121 at 2639.907 kb on + strand, within DvMF_2121 at 2640.097 kb on + strand, within DvMF_2121 at 2640.150 kb on - strand, within DvMF_2121 at 2640.188 kb on - strand, within DvMF_2121 at 2640.204 kb on + strand, within DvMF_2121 at 2640.368 kb on + strand at 2640.368 kb on + strand at 2640.381 kb on + strand at 2640.674 kb on + strand at 2640.787 kb on - strand at 2641.300 kb on - strand, within DvMF_2122 at 2641.305 kb on - strand, within DvMF_2122 at 2641.903 kb on - strand at 2642.236 kb on - strand at 2642.265 kb on - strand at 2642.276 kb on - strand at 2642.454 kb on - strand, within DvMF_2123 at 2642.455 kb on + strand, within DvMF_2123 at 2642.542 kb on - strand, within DvMF_2123 at 2642.542 kb on - strand, within DvMF_2123
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 2,639,848 - DvMF_2121 0.67 +1.0 2,639,858 - DvMF_2121 0.67 -0.3 2,639,907 + DvMF_2121 0.70 -0.3 2,640,097 + DvMF_2121 0.82 -0.7 2,640,150 - DvMF_2121 0.86 -0.4 2,640,188 - DvMF_2121 0.88 -0.2 2,640,204 + DvMF_2121 0.89 -1.0 2,640,368 + +0.1 2,640,368 + -0.2 2,640,381 + -0.6 2,640,674 + -1.1 2,640,787 - -0.7 2,641,300 - DvMF_2122 0.54 -1.1 2,641,305 - DvMF_2122 0.54 -0.2 2,641,903 - -0.2 2,642,236 - -0.2 2,642,265 - -0.2 2,642,276 - -0.0 2,642,454 - DvMF_2123 0.28 -0.5 2,642,455 + DvMF_2123 0.28 +0.1 2,642,542 - DvMF_2123 0.37 -0.3 2,642,542 - DvMF_2123 0.37 -0.4
Or see this region's nucleotide sequence