Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1086 and DvMF_1087 are separated by 397 nucleotides DvMF_1087 and DvMF_1088 are separated by 191 nucleotides
DvMF_1086: DvMF_1086 - hypothetical protein (RefSeq), at 1,324,781 to 1,325,494
_1086
DvMF_1087: DvMF_1087 - hypothetical protein (RefSeq), at 1,325,892 to 1,326,509
_1087
DvMF_1088: DvMF_1088 - signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq), at 1,326,701 to 1,329,169
_1088
Position (kb)
1325
1326
1327 Strain fitness (log2 ratio)
-1
0
1 at 1325.112 kb on + strand, within DvMF_1086 at 1325.236 kb on + strand, within DvMF_1086 at 1325.294 kb on + strand, within DvMF_1086 at 1325.442 kb on + strand at 1325.640 kb on + strand at 1325.712 kb on + strand at 1325.915 kb on - strand at 1326.056 kb on + strand, within DvMF_1087 at 1326.110 kb on - strand, within DvMF_1087 at 1326.259 kb on - strand, within DvMF_1087 at 1326.264 kb on + strand, within DvMF_1087 at 1326.340 kb on + strand, within DvMF_1087 at 1326.422 kb on - strand, within DvMF_1087 at 1326.464 kb on - strand at 1326.603 kb on + strand at 1326.618 kb on + strand at 1326.624 kb on + strand at 1326.917 kb on - strand at 1326.971 kb on + strand, within DvMF_1088 at 1327.096 kb on + strand, within DvMF_1088 at 1327.096 kb on + strand, within DvMF_1088 at 1327.096 kb on + strand, within DvMF_1088 at 1327.096 kb on + strand, within DvMF_1088 at 1327.098 kb on - strand, within DvMF_1088 at 1327.104 kb on - strand, within DvMF_1088 at 1327.104 kb on - strand, within DvMF_1088 at 1327.104 kb on - strand, within DvMF_1088 at 1327.104 kb on - strand, within DvMF_1088 at 1327.104 kb on - strand, within DvMF_1088 at 1327.137 kb on + strand, within DvMF_1088
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 1,325,112 + DvMF_1086 0.46 -0.0 1,325,236 + DvMF_1086 0.64 +0.7 1,325,294 + DvMF_1086 0.72 -0.1 1,325,442 + +0.1 1,325,640 + +0.5 1,325,712 + -0.2 1,325,915 - -0.4 1,326,056 + DvMF_1087 0.27 -0.5 1,326,110 - DvMF_1087 0.35 -0.6 1,326,259 - DvMF_1087 0.59 -0.2 1,326,264 + DvMF_1087 0.60 -1.6 1,326,340 + DvMF_1087 0.72 -0.4 1,326,422 - DvMF_1087 0.86 -1.1 1,326,464 - -0.1 1,326,603 + -0.5 1,326,618 + -0.3 1,326,624 + -0.2 1,326,917 - -0.2 1,326,971 + DvMF_1088 0.11 -0.2 1,327,096 + DvMF_1088 0.16 -0.6 1,327,096 + DvMF_1088 0.16 -0.7 1,327,096 + DvMF_1088 0.16 -0.3 1,327,096 + DvMF_1088 0.16 -0.1 1,327,098 - DvMF_1088 0.16 -0.3 1,327,104 - DvMF_1088 0.16 -0.5 1,327,104 - DvMF_1088 0.16 -0.6 1,327,104 - DvMF_1088 0.16 -0.0 1,327,104 - DvMF_1088 0.16 -0.3 1,327,104 - DvMF_1088 0.16 -0.4 1,327,137 + DvMF_1088 0.18 -0.4
Or see this region's nucleotide sequence