Experiment: sodium fluoride 35 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_817 and Ac3H11_818 overlap by 4 nucleotides Ac3H11_818 and Ac3H11_819 are separated by 42 nucleotides Ac3H11_819 and Ac3H11_820 are separated by 105 nucleotides Ac3H11_820 and Ac3H11_821 are separated by 174 nucleotides
Ac3H11_817 - Multiple antibiotic resistance (MarC) -related proteins, at 101,682 to 102,275
_817
Ac3H11_818 - ring-cleaving dioxygenase, putative, at 102,272 to 102,685
_818
Ac3H11_819 - transcriptional regulators, TraR/DksA family, at 102,728 to 103,099
_819
Ac3H11_820 - Glutathione S-transferase N-terminal domain protein (EC 2.5.1.18), at 103,205 to 103,852
_820
Ac3H11_821 - hypothetical protein, at 104,027 to 104,344
_821
Position (kb) 102
103
104 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 102.268 kb on + strand at 102.268 kb on + strand at 102.268 kb on + strand at 102.268 kb on + strand at 102.268 kb on + strand at 102.268 kb on + strand at 102.268 kb on + strand at 102.269 kb on - strand at 102.269 kb on - strand at 102.269 kb on - strand at 102.269 kb on - strand at 102.269 kb on - strand at 102.269 kb on - strand at 102.269 kb on - strand at 102.269 kb on - strand at 102.282 kb on + strand at 102.282 kb on + strand at 102.282 kb on + strand at 102.283 kb on - strand at 102.283 kb on - strand at 102.283 kb on - strand at 102.283 kb on - strand at 102.486 kb on - strand, within Ac3H11_818 at 102.624 kb on + strand, within Ac3H11_818 at 102.625 kb on - strand, within Ac3H11_818 at 102.625 kb on - strand, within Ac3H11_818 at 102.625 kb on - strand, within Ac3H11_818 at 102.625 kb on - strand, within Ac3H11_818 at 102.625 kb on - strand, within Ac3H11_818 at 102.625 kb on - strand, within Ac3H11_818 at 102.698 kb on - strand at 102.698 kb on - strand at 102.698 kb on - strand at 102.847 kb on - strand, within Ac3H11_819 at 102.847 kb on - strand, within Ac3H11_819 at 102.847 kb on - strand, within Ac3H11_819 at 103.183 kb on + strand at 103.184 kb on - strand at 103.184 kb on - strand at 103.302 kb on + strand, within Ac3H11_820 at 103.302 kb on + strand, within Ac3H11_820 at 103.302 kb on + strand, within Ac3H11_820 at 103.302 kb on + strand, within Ac3H11_820 at 103.303 kb on - strand, within Ac3H11_820 at 103.329 kb on + strand, within Ac3H11_820 at 103.329 kb on + strand, within Ac3H11_820 at 103.329 kb on + strand, within Ac3H11_820 at 103.330 kb on - strand, within Ac3H11_820 at 103.341 kb on + strand, within Ac3H11_820 at 103.342 kb on - strand, within Ac3H11_820 at 103.425 kb on + strand, within Ac3H11_820 at 103.425 kb on + strand, within Ac3H11_820 at 103.425 kb on + strand, within Ac3H11_820 at 103.425 kb on + strand, within Ac3H11_820 at 103.425 kb on + strand, within Ac3H11_820 at 103.425 kb on + strand, within Ac3H11_820 at 103.426 kb on - strand, within Ac3H11_820 at 103.426 kb on - strand, within Ac3H11_820 at 103.426 kb on - strand, within Ac3H11_820 at 103.426 kb on - strand, within Ac3H11_820 at 103.536 kb on + strand, within Ac3H11_820 at 103.537 kb on - strand, within Ac3H11_820 at 103.537 kb on - strand, within Ac3H11_820 at 103.656 kb on + strand, within Ac3H11_820 at 103.656 kb on + strand, within Ac3H11_820 at 103.656 kb on + strand, within Ac3H11_820 at 103.656 kb on + strand, within Ac3H11_820 at 103.657 kb on - strand, within Ac3H11_820 at 103.657 kb on - strand, within Ac3H11_820 at 103.657 kb on - strand, within Ac3H11_820 at 103.657 kb on - strand, within Ac3H11_820 at 103.657 kb on - strand, within Ac3H11_820 at 103.657 kb on - strand, within Ac3H11_820 at 103.707 kb on + strand, within Ac3H11_820 at 103.707 kb on + strand, within Ac3H11_820 at 103.707 kb on + strand, within Ac3H11_820 at 103.708 kb on - strand, within Ac3H11_820 at 103.708 kb on - strand, within Ac3H11_820 at 103.708 kb on - strand, within Ac3H11_820 at 103.742 kb on + strand, within Ac3H11_820 at 103.743 kb on - strand, within Ac3H11_820 at 103.743 kb on - strand, within Ac3H11_820 at 103.743 kb on - strand, within Ac3H11_820 at 103.743 kb on - strand, within Ac3H11_820 at 103.743 kb on - strand, within Ac3H11_820 at 103.815 kb on + strand at 103.816 kb on - strand at 103.816 kb on - strand at 103.816 kb on - strand at 103.816 kb on - strand at 103.816 kb on - strand at 103.818 kb on + strand at 103.818 kb on + strand at 103.818 kb on + strand at 103.818 kb on + strand at 103.818 kb on + strand at 103.818 kb on + strand at 103.819 kb on - strand at 103.819 kb on - strand at 103.819 kb on - strand at 103.819 kb on - strand at 103.819 kb on - strand at 103.819 kb on - strand at 103.819 kb on - strand at 103.869 kb on + strand at 103.869 kb on + strand at 103.870 kb on - strand at 103.870 kb on - strand at 103.870 kb on - strand at 103.870 kb on - strand at 103.893 kb on + strand at 103.893 kb on + strand at 103.893 kb on + strand at 103.893 kb on + strand at 103.893 kb on + strand at 103.893 kb on + strand at 103.893 kb on + strand at 103.893 kb on + strand at 103.893 kb on + strand at 103.893 kb on + strand at 103.893 kb on + strand at 103.893 kb on + strand at 103.893 kb on + strand at 103.893 kb on + strand at 103.894 kb on - strand at 103.894 kb on - strand at 103.894 kb on - strand at 103.894 kb on - strand at 103.894 kb on - strand at 103.894 kb on - strand at 103.894 kb on - strand at 103.894 kb on - strand at 103.894 kb on - strand at 103.894 kb on - strand at 103.961 kb on + strand at 103.961 kb on + strand at 103.962 kb on - strand at 103.962 kb on - strand at 103.962 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 35 mM remove 102,268 + -0.4 102,268 + +0.8 102,268 + +0.1 102,268 + +0.8 102,268 + -1.6 102,268 + +0.4 102,268 + +0.0 102,269 - -0.3 102,269 - -0.9 102,269 - -1.8 102,269 - -2.2 102,269 - +0.7 102,269 - -0.2 102,269 - -0.2 102,269 - -0.4 102,282 + -0.2 102,282 + -3.2 102,282 + -0.1 102,283 - -0.7 102,283 - +0.1 102,283 - +0.4 102,283 - +0.1 102,486 - Ac3H11_818 0.52 +0.9 102,624 + Ac3H11_818 0.85 -0.5 102,625 - Ac3H11_818 0.85 +0.4 102,625 - Ac3H11_818 0.85 +0.6 102,625 - Ac3H11_818 0.85 -1.2 102,625 - Ac3H11_818 0.85 +0.1 102,625 - Ac3H11_818 0.85 +0.9 102,625 - Ac3H11_818 0.85 -2.3 102,698 - +1.1 102,698 - -0.2 102,698 - +0.2 102,847 - Ac3H11_819 0.32 +0.4 102,847 - Ac3H11_819 0.32 +0.3 102,847 - Ac3H11_819 0.32 +1.1 103,183 + -0.9 103,184 - +0.2 103,184 - -0.3 103,302 + Ac3H11_820 0.15 -1.1 103,302 + Ac3H11_820 0.15 -0.4 103,302 + Ac3H11_820 0.15 +0.3 103,302 + Ac3H11_820 0.15 +0.1 103,303 - Ac3H11_820 0.15 -1.5 103,329 + Ac3H11_820 0.19 +0.8 103,329 + Ac3H11_820 0.19 -0.4 103,329 + Ac3H11_820 0.19 +0.2 103,330 - Ac3H11_820 0.19 -0.8 103,341 + Ac3H11_820 0.21 +0.3 103,342 - Ac3H11_820 0.21 -1.7 103,425 + Ac3H11_820 0.34 +2.6 103,425 + Ac3H11_820 0.34 -0.1 103,425 + Ac3H11_820 0.34 +0.0 103,425 + Ac3H11_820 0.34 +2.1 103,425 + Ac3H11_820 0.34 +0.3 103,425 + Ac3H11_820 0.34 -0.5 103,426 - Ac3H11_820 0.34 +1.0 103,426 - Ac3H11_820 0.34 -1.2 103,426 - Ac3H11_820 0.34 -1.9 103,426 - Ac3H11_820 0.34 +0.2 103,536 + Ac3H11_820 0.51 -1.5 103,537 - Ac3H11_820 0.51 -0.6 103,537 - Ac3H11_820 0.51 -0.0 103,656 + Ac3H11_820 0.70 -0.2 103,656 + Ac3H11_820 0.70 +0.8 103,656 + Ac3H11_820 0.70 +0.3 103,656 + Ac3H11_820 0.70 -0.0 103,657 - Ac3H11_820 0.70 -2.1 103,657 - Ac3H11_820 0.70 -0.1 103,657 - Ac3H11_820 0.70 +0.2 103,657 - Ac3H11_820 0.70 -0.7 103,657 - Ac3H11_820 0.70 -1.7 103,657 - Ac3H11_820 0.70 +0.1 103,707 + Ac3H11_820 0.77 +1.1 103,707 + Ac3H11_820 0.77 +0.3 103,707 + Ac3H11_820 0.77 +1.4 103,708 - Ac3H11_820 0.78 +1.4 103,708 - Ac3H11_820 0.78 +0.3 103,708 - Ac3H11_820 0.78 -0.1 103,742 + Ac3H11_820 0.83 +0.6 103,743 - Ac3H11_820 0.83 +0.2 103,743 - Ac3H11_820 0.83 -0.8 103,743 - Ac3H11_820 0.83 -0.1 103,743 - Ac3H11_820 0.83 +0.0 103,743 - Ac3H11_820 0.83 -0.4 103,815 + +0.6 103,816 - -0.1 103,816 - -0.4 103,816 - -0.7 103,816 - +0.2 103,816 - +0.9 103,818 + -0.7 103,818 + +0.7 103,818 + -0.8 103,818 + +0.6 103,818 + +0.6 103,818 + -0.1 103,819 - -2.4 103,819 - +0.7 103,819 - +0.9 103,819 - +1.6 103,819 - -0.0 103,819 - -0.6 103,819 - -0.7 103,869 + -0.3 103,869 + +0.0 103,870 - -0.5 103,870 - +0.1 103,870 - -0.4 103,870 - -0.1 103,893 + -1.1 103,893 + -0.7 103,893 + +0.0 103,893 + +0.0 103,893 + -0.3 103,893 + +0.2 103,893 + +0.8 103,893 + +0.2 103,893 + +2.6 103,893 + -0.4 103,893 + +0.1 103,893 + -0.2 103,893 + +0.2 103,893 + +0.1 103,894 - -0.3 103,894 - +0.1 103,894 - +0.6 103,894 - +0.5 103,894 - +0.7 103,894 - +1.1 103,894 - +0.2 103,894 - +0.0 103,894 - +0.5 103,894 - -1.1 103,961 + -0.0 103,961 + +0.2 103,962 - -0.6 103,962 - +1.6 103,962 - +0.6
Or see this region's nucleotide sequence