Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1365 and DvMF_1366 are separated by 331 nucleotides DvMF_1366 and DvMF_1367 are separated by 36 nucleotides
DvMF_1365: DvMF_1365 - Peptidase M16C associated domain protein (RefSeq), at 1,671,662 to 1,674,568
_1365
DvMF_1366: DvMF_1366 - diguanylate cyclase (RefSeq), at 1,674,900 to 1,675,676
_1366
DvMF_1367: DvMF_1367 - hypothetical protein (RefSeq), at 1,675,713 to 1,676,474
_1367
Position (kb)
1674
1675
1676 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1673.974 kb on + strand, within DvMF_1365 at 1674.057 kb on - strand, within DvMF_1365 at 1674.103 kb on - strand, within DvMF_1365 at 1674.150 kb on - strand, within DvMF_1365 at 1674.384 kb on - strand at 1674.973 kb on + strand at 1674.975 kb on - strand at 1675.010 kb on - strand, within DvMF_1366 at 1675.047 kb on - strand, within DvMF_1366 at 1675.204 kb on + strand, within DvMF_1366 at 1675.298 kb on + strand, within DvMF_1366 at 1675.318 kb on + strand, within DvMF_1366 at 1675.493 kb on - strand, within DvMF_1366 at 1675.685 kb on - strand at 1675.947 kb on - strand, within DvMF_1367 at 1676.002 kb on - strand, within DvMF_1367 at 1676.075 kb on + strand, within DvMF_1367 at 1676.129 kb on + strand, within DvMF_1367 at 1676.177 kb on + strand, within DvMF_1367 at 1676.299 kb on - strand, within DvMF_1367 at 1676.304 kb on - strand, within DvMF_1367 at 1676.332 kb on + strand, within DvMF_1367 at 1676.582 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 1,673,974 + DvMF_1365 0.80 -1.1 1,674,057 - DvMF_1365 0.82 -0.6 1,674,103 - DvMF_1365 0.84 -1.8 1,674,150 - DvMF_1365 0.86 -1.5 1,674,384 - -2.9 1,674,973 + +0.5 1,674,975 - -0.9 1,675,010 - DvMF_1366 0.14 -0.9 1,675,047 - DvMF_1366 0.19 -0.4 1,675,204 + DvMF_1366 0.39 -0.4 1,675,298 + DvMF_1366 0.51 -1.0 1,675,318 + DvMF_1366 0.54 -1.2 1,675,493 - DvMF_1366 0.76 -1.0 1,675,685 - -0.5 1,675,947 - DvMF_1367 0.31 -0.8 1,676,002 - DvMF_1367 0.38 -0.6 1,676,075 + DvMF_1367 0.48 -0.7 1,676,129 + DvMF_1367 0.55 -1.0 1,676,177 + DvMF_1367 0.61 -0.5 1,676,299 - DvMF_1367 0.77 -0.1 1,676,304 - DvMF_1367 0.78 -1.0 1,676,332 + DvMF_1367 0.81 -0.3 1,676,582 - -0.1
Or see this region's nucleotide sequence