Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0413 and DvMF_0414 are separated by 75 nucleotides DvMF_0414 and DvMF_0415 are separated by 281 nucleotides DvMF_0415 and DvMF_0416 are separated by 252 nucleotides
DvMF_0413: DvMF_0413 - putative signal transduction protein with CBS domains (RefSeq), at 482,452 to 482,880
_0413
DvMF_0414: DvMF_0414 - Peptidase M23 (RefSeq), at 482,956 to 484,266
_0414
DvMF_0415: DvMF_0415 - protein of unknown function DUF488 (RefSeq), at 484,548 to 484,940
_0415
DvMF_0416: DvMF_0416 - pyruvate phosphate dikinase PEP/pyruvate-binding (RefSeq), at 485,193 to 488,771
_0416
Position (kb) 482
483
484
485 Strain fitness (log2 ratio) -1
0
1 at 482.085 kb on - strand at 482.122 kb on - strand at 482.669 kb on - strand, within DvMF_0413 at 482.797 kb on + strand, within DvMF_0413 at 482.864 kb on - strand at 482.874 kb on + strand at 482.904 kb on - strand at 483.050 kb on - strand at 483.339 kb on + strand, within DvMF_0414 at 483.339 kb on + strand, within DvMF_0414 at 483.339 kb on + strand, within DvMF_0414 at 483.347 kb on - strand, within DvMF_0414 at 483.478 kb on + strand, within DvMF_0414 at 483.905 kb on + strand, within DvMF_0414 at 484.315 kb on + strand at 484.425 kb on - strand at 484.545 kb on + strand at 484.553 kb on - strand at 484.685 kb on + strand, within DvMF_0415 at 485.232 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 482,085 - -0.6 482,122 - -0.2 482,669 - DvMF_0413 0.51 -0.2 482,797 + DvMF_0413 0.80 +0.4 482,864 - +0.3 482,874 + -0.1 482,904 - -0.3 483,050 - -0.6 483,339 + DvMF_0414 0.29 -0.7 483,339 + DvMF_0414 0.29 -0.8 483,339 + DvMF_0414 0.29 -1.3 483,347 - DvMF_0414 0.30 -0.5 483,478 + DvMF_0414 0.40 -0.7 483,905 + DvMF_0414 0.72 -0.7 484,315 + -0.7 484,425 - +0.0 484,545 + +0.2 484,553 - +0.4 484,685 + DvMF_0415 0.35 -0.3 485,232 - -0.2
Or see this region's nucleotide sequence