Experiment: Glycine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_67 and PfGW456L13_68 are separated by 792 nucleotides PfGW456L13_68 and PfGW456L13_69 are separated by 501 nucleotides
PfGW456L13_67 - Cobalamin biosynthesis protein CobG, at 77,842 to 79,113
_67
PfGW456L13_68 - hypothetical protein, at 79,906 to 80,049
_68
PfGW456L13_69 - Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-), at 80,551 to 81,399
_69
Position (kb)
79
80
81 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 79.004 kb on + strand at 79.080 kb on + strand at 79.081 kb on - strand at 79.081 kb on - strand at 79.196 kb on + strand at 79.196 kb on + strand at 79.196 kb on + strand at 79.196 kb on + strand at 79.196 kb on + strand at 79.196 kb on + strand at 79.197 kb on - strand at 79.197 kb on - strand at 79.197 kb on - strand at 79.197 kb on - strand at 79.197 kb on - strand at 79.197 kb on - strand at 79.249 kb on - strand at 79.265 kb on + strand at 79.265 kb on + strand at 79.265 kb on + strand at 79.266 kb on - strand at 79.266 kb on - strand at 79.356 kb on - strand at 79.379 kb on + strand at 79.383 kb on + strand at 79.383 kb on + strand at 79.385 kb on + strand at 79.385 kb on + strand at 79.385 kb on + strand at 79.386 kb on - strand at 79.386 kb on - strand at 79.480 kb on + strand at 79.481 kb on - strand at 79.508 kb on + strand at 79.509 kb on - strand at 79.573 kb on + strand at 79.573 kb on + strand at 79.573 kb on + strand at 79.573 kb on + strand at 79.573 kb on + strand at 79.573 kb on + strand at 79.573 kb on + strand at 79.574 kb on - strand at 79.717 kb on - strand at 79.717 kb on - strand at 79.717 kb on - strand at 79.762 kb on + strand at 79.805 kb on + strand at 79.950 kb on + strand, within PfGW456L13_68 at 79.967 kb on + strand, within PfGW456L13_68 at 80.073 kb on - strand at 80.113 kb on - strand at 80.173 kb on + strand at 80.174 kb on - strand at 80.211 kb on - strand at 80.211 kb on - strand at 80.459 kb on + strand at 80.459 kb on + strand at 80.459 kb on + strand at 80.460 kb on - strand at 80.478 kb on + strand at 80.478 kb on + strand at 80.478 kb on + strand at 80.478 kb on + strand at 80.478 kb on + strand at 80.479 kb on - strand at 80.625 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycine (N) remove 79,004 + +0.6 79,080 + -0.2 79,081 - -0.5 79,081 - -0.5 79,196 + -1.1 79,196 + -1.1 79,196 + -2.0 79,196 + +0.2 79,196 + -0.6 79,196 + -0.8 79,197 - +0.2 79,197 - +0.4 79,197 - +0.6 79,197 - +0.1 79,197 - +0.4 79,197 - +0.1 79,249 - -0.5 79,265 + +0.4 79,265 + -0.5 79,265 + +1.1 79,266 - -0.7 79,266 - +0.6 79,356 - +0.8 79,379 + -0.0 79,383 + -0.1 79,383 + -0.4 79,385 + +0.2 79,385 + -1.5 79,385 + +1.5 79,386 - +1.0 79,386 - -0.8 79,480 + +0.3 79,481 - +0.7 79,508 + +0.4 79,509 - -0.0 79,573 + -0.3 79,573 + +0.6 79,573 + -0.5 79,573 + -0.6 79,573 + +0.3 79,573 + +1.1 79,573 + +1.3 79,574 - +2.6 79,717 - +0.8 79,717 - -1.7 79,717 - -1.3 79,762 + -0.0 79,805 + +0.1 79,950 + PfGW456L13_68 0.31 -0.3 79,967 + PfGW456L13_68 0.42 -0.3 80,073 - +1.3 80,113 - +0.4 80,173 + +0.6 80,174 - -0.2 80,211 - +1.6 80,211 - +0.2 80,459 + -0.0 80,459 + -1.8 80,459 + +0.1 80,460 - -1.5 80,478 + -1.1 80,478 + +0.4 80,478 + -0.0 80,478 + -0.1 80,478 + -1.4 80,479 - -0.0 80,625 + -1.3
Or see this region's nucleotide sequence