Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS11995

Experiment: R2A with SpecU metal mix 1 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with SpecU metal mix 1 X
2,659,418	-		LRK54_RS11990	0.68	-0.8
2,659,418	-		LRK54_RS11990	0.68	-0.1
2,659,435	+		LRK54_RS11990	0.68	-0.7
2,659,436	-		LRK54_RS11990	0.68	-0.0
2,659,436	-		LRK54_RS11990	0.68	+1.3
2,659,436	-		LRK54_RS11990	0.68	+0.8
2,659,459	+		LRK54_RS11990	0.69	-0.0
2,659,459	+		LRK54_RS11990	0.69	+3.1
2,659,459	+		LRK54_RS11990	0.69	-1.5
2,659,459	+		LRK54_RS11990	0.69	+0.3
2,659,459	+		LRK54_RS11990	0.69	-0.7
2,659,460	-		LRK54_RS11990	0.69	-0.4
2,659,460	-		LRK54_RS11990	0.69	-0.7
2,659,460	-		LRK54_RS11990	0.69	+1.6
2,659,460	-		LRK54_RS11990	0.69	-0.8
2,659,460	-		LRK54_RS11990	0.69	+1.2
2,659,460	-		LRK54_RS11990	0.69	-2.2
2,659,460	-		LRK54_RS11990	0.69	-0.7
2,659,460	-		LRK54_RS11990	0.69	-0.1
2,659,460	-		LRK54_RS11990	0.69	+0.2
2,659,483	+		LRK54_RS11990	0.70	+1.1
2,659,483	+		LRK54_RS11990	0.70	+1.8
2,659,579	+		LRK54_RS11990	0.75	+0.1
2,659,579	+		LRK54_RS11990	0.75	-0.3
2,659,579	+		LRK54_RS11990	0.75	-0.2
2,659,579	+		LRK54_RS11990	0.75	+0.2
2,659,579	+		LRK54_RS11990	0.75	-2.1
2,659,579	+		LRK54_RS11990	0.75	+1.0
2,659,580	-		LRK54_RS11990	0.75	+0.2
2,659,580	-		LRK54_RS11990	0.75	+1.4
2,659,580	-		LRK54_RS11990	0.75	+0.6
2,659,580	-		LRK54_RS11990	0.75	+0.2
2,659,580	-		LRK54_RS11990	0.75	-0.4
2,659,744	+		LRK54_RS11990	0.82	+0.8
2,659,744	+		LRK54_RS11990	0.82	-0.5
2,659,745	-		LRK54_RS11990	0.82	-0.8
2,659,745	-		LRK54_RS11990	0.82	+1.6
2,659,745	-		LRK54_RS11990	0.82	-0.2
2,659,745	-		LRK54_RS11990	0.82	+1.0
2,659,745	-		LRK54_RS11990	0.82	+0.6
2,659,745	-		LRK54_RS11990	0.82	-0.4
2,659,745	-		LRK54_RS11990	0.82	-0.6
2,659,745	-		LRK54_RS11990	0.82	+0.8
2,659,745	-		LRK54_RS11990	0.82	-0.3
2,659,770	+		LRK54_RS11990	0.83	+0.2
2,659,770	+		LRK54_RS11990	0.83	-0.2
2,659,770	+		LRK54_RS11990	0.83	+0.8
2,659,770	+		LRK54_RS11990	0.83	-0.4
2,659,771	-		LRK54_RS11990	0.83	+0.5
2,659,771	-		LRK54_RS11990	0.83	-1.2
2,659,771	-		LRK54_RS11990	0.83	-0.6
2,659,771	-		LRK54_RS11990	0.83	+0.6
2,659,771	-		LRK54_RS11990	0.83	-0.2
2,660,005	+				-0.8
2,660,005	+				-0.8
2,660,005	+				-0.8
2,660,005	+				-0.6
2,660,005	+				-0.5
2,660,005	+				-0.2
2,660,005	+				-1.4
2,660,005	+				-0.8
2,660,005	+				-0.3
2,660,005	+				-0.6
2,660,005	+				+0.6
2,660,005	+				-0.2
2,660,005	+				-0.6
2,660,005	+				-0.1
2,660,005	+				+1.3
2,660,005	+				-0.2
2,660,005	+				-0.0
2,660,005	+				+0.3
2,660,005	+				+2.1
2,660,005	+				+0.4
2,660,005	+				-0.5
2,660,005	+				+0.7
2,660,005	+				+1.8
2,660,005	+				-0.6
2,660,006	-				-0.1
2,660,006	-				-0.2
2,660,006	-				+1.2
2,660,006	-				+0.2
2,660,006	-				-0.0
2,660,006	-				-2.2
2,660,006	-				-1.2
2,660,006	-				+0.2
2,660,006	-				+0.3
2,660,006	-				-0.2
2,660,006	-				-1.2
2,660,006	-				+0.3
2,660,006	-				-0.2
2,660,006	-				-0.5
2,660,006	-				-1.1
2,660,006	-				-0.2
2,660,006	-				+0.9
2,660,006	-				+0.1
2,660,006	-				-0.1
2,660,006	-				+2.3
2,660,006	-				+0.2
2,660,006	-				+0.1
2,660,006	-				+0.8
2,660,006	-				-1.2
2,660,006	-				-0.2
2,660,006	-				-0.1
2,660,258	+				+0.2
2,660,258	+				-0.3
2,660,258	+				-0.8
2,660,258	+				+0.2
2,660,258	+				-0.4
2,660,258	+				-0.6
2,660,258	+				+0.0
2,660,258	+				-0.5
2,660,259	-				+1.1
2,660,259	-				-0.1
2,660,259	-				+0.1
2,660,259	-				-0.4
2,660,259	-				+0.8
2,660,259	-				-1.2
2,660,259	-				+1.8
2,660,259	-				+0.5
2,660,259	-				-0.3
2,660,390	+				+1.3
2,660,391	-				+0.8
2,660,415	+				+0.8
2,660,415	+				-2.4
2,660,415	+				-1.2
2,660,415	+				-0.6
2,660,415	+				+1.8
2,660,415	+				-1.2
2,660,415	+				-2.2
2,660,416	-		LRK54_RS11995	0.11	-1.1
2,660,416	-		LRK54_RS11995	0.11	-1.2
2,660,416	-		LRK54_RS11995	0.11	-1.0
2,660,416	-		LRK54_RS11995	0.11	-1.8
2,660,416	-		LRK54_RS11995	0.11	-1.3
2,660,416	-		LRK54_RS11995	0.11	-1.8
2,660,416	-		LRK54_RS11995	0.11	-1.7
2,660,416	-		LRK54_RS11995	0.11	-0.8
2,660,416	-		LRK54_RS11995	0.11	-0.6
2,660,416	-		LRK54_RS11995	0.11	-2.4
2,660,416	-		LRK54_RS11995	0.11	-0.8
2,660,426	+		LRK54_RS11995	0.24	-1.5
2,660,426	+		LRK54_RS11995	0.24	-3.1
2,660,426	+		LRK54_RS11995	0.24	-1.6
2,660,426	+		LRK54_RS11995	0.24	-3.2
2,660,426	+		LRK54_RS11995	0.24	-1.7
2,660,426	+		LRK54_RS11995	0.24	-2.9
2,660,426	+		LRK54_RS11995	0.24	+0.2
2,660,426	+		LRK54_RS11995	0.24	-1.9
2,660,426	+		LRK54_RS11995	0.24	-1.0
2,660,426	+		LRK54_RS11995	0.24	-2.4
2,660,426	+		LRK54_RS11995	0.24	-1.6
2,660,426	+		LRK54_RS11995	0.24	-0.8
2,660,426	+		LRK54_RS11995	0.24	-1.6
2,660,426	+		LRK54_RS11995	0.24	+0.2
2,660,426	+		LRK54_RS11995	0.24	-2.2
2,660,426	+		LRK54_RS11995	0.24	-2.4
2,660,426	+		LRK54_RS11995	0.24	+0.3
2,660,427	-		LRK54_RS11995	0.26	-0.4
2,660,427	-		LRK54_RS11995	0.26	-0.6
2,660,427	-		LRK54_RS11995	0.26	+1.8
2,660,427	-		LRK54_RS11995	0.26	-0.8
2,660,427	-		LRK54_RS11995	0.26	-0.2
2,660,427	-		LRK54_RS11995	0.26	-1.6
2,660,427	-		LRK54_RS11995	0.26	-1.4
2,660,427	-		LRK54_RS11995	0.26	-1.8
2,660,427	-		LRK54_RS11995	0.26	-1.2
2,660,434	+		LRK54_RS11995	0.35	+0.2
2,660,434	+		LRK54_RS11995	0.35	+0.8
2,660,434	+		LRK54_RS11995	0.35	-2.1
2,660,434	+		LRK54_RS11995	0.35	-3.2
2,660,434	+		LRK54_RS11995	0.35	-1.2
2,660,434	+		LRK54_RS11995	0.35	-1.6
2,660,434	+		LRK54_RS11995	0.35	-0.8
2,660,434	+		LRK54_RS11995	0.35	-0.8
2,660,434	+		LRK54_RS11995	0.35	-0.2
2,660,434	+		LRK54_RS11995	0.35	-2.4
2,660,434	+		LRK54_RS11995	0.35	-0.1
2,660,434	+		LRK54_RS11995	0.35	-1.4
2,660,434	+		LRK54_RS11995	0.35	-0.9
2,660,434	+		LRK54_RS11995	0.35	-0.4
2,660,434	+		LRK54_RS11995	0.35	-1.8
2,660,434	+		LRK54_RS11995	0.35	-1.5
2,660,434	+		LRK54_RS11995	0.35	-3.8
2,660,434	+		LRK54_RS11995	0.35	-2.2
2,660,434	+		LRK54_RS11995	0.35	-2.0
2,660,434	+		LRK54_RS11995	0.35	-1.2
2,660,434	+		LRK54_RS11995	0.35	-1.2
2,660,434	+		LRK54_RS11995	0.35	-0.5
2,660,434	+		LRK54_RS11995	0.35	-0.4
2,660,435	-		LRK54_RS11995	0.36	+0.8
2,660,435	-		LRK54_RS11995	0.36	+0.8
2,660,435	-		LRK54_RS11995	0.36	-2.1
2,660,435	-		LRK54_RS11995	0.36	-1.9
2,660,435	-		LRK54_RS11995	0.36	-2.4
2,660,435	-		LRK54_RS11995	0.36	-1.2
2,660,435	-		LRK54_RS11995	0.36	-1.0
2,660,435	-		LRK54_RS11995	0.36	-0.8
2,660,435	-		LRK54_RS11995	0.36	-0.8
2,660,435	-		LRK54_RS11995	0.36	-1.1
2,660,435	-		LRK54_RS11995	0.36	-1.9
2,660,435	-		LRK54_RS11995	0.36	-4.1
2,660,435	-		LRK54_RS11995	0.36	-0.7
2,660,435	-		LRK54_RS11995	0.36	-2.5
2,660,435	-		LRK54_RS11995	0.36	-1.2
2,660,435	-		LRK54_RS11995	0.36	-1.2
2,660,435	-		LRK54_RS11995	0.36	-1.1
2,660,435	-		LRK54_RS11995	0.36	-1.4
2,660,435	-		LRK54_RS11995	0.36	-1.2
2,660,447	+		LRK54_RS11995	0.53	-2.2
2,660,447	+		LRK54_RS11995	0.53	-3.0
2,660,447	+		LRK54_RS11995	0.53	-1.6
2,660,447	+		LRK54_RS11995	0.53	-2.7
2,660,447	+		LRK54_RS11995	0.53	-1.2
2,660,447	+		LRK54_RS11995	0.53	-0.8
2,660,447	+		LRK54_RS11995	0.53	-2.3
2,660,447	+		LRK54_RS11995	0.53	-0.4
2,660,447	+		LRK54_RS11995	0.53	-2.2
2,660,447	+		LRK54_RS11995	0.53	+0.8
2,660,447	+		LRK54_RS11995	0.53	-1.6
2,660,447	+		LRK54_RS11995	0.53	-2.1
2,660,447	+		LRK54_RS11995	0.53	-0.2
2,660,448	-		LRK54_RS11995	0.54	-1.9
2,660,448	-		LRK54_RS11995	0.54	-1.0
2,660,448	-		LRK54_RS11995	0.54	-0.7
2,660,448	-		LRK54_RS11995	0.54	-3.2
2,660,448	-		LRK54_RS11995	0.54	-0.9
2,660,448	-		LRK54_RS11995	0.54	-2.6
2,660,448	-		LRK54_RS11995	0.54	-0.8
2,660,795	+		LRK54_RS12000	0.62	+1.0
2,660,795	+		LRK54_RS12000	0.62	+0.3
2,660,795	+		LRK54_RS12000	0.62	+0.3
2,660,795	+		LRK54_RS12000	0.62	-1.1
2,660,795	+		LRK54_RS12000	0.62	-0.0
2,660,795	+		LRK54_RS12000	0.62	+0.6
2,660,795	+		LRK54_RS12000	0.62	+0.3
2,660,795	+		LRK54_RS12000	0.62	-0.0
2,660,795	+		LRK54_RS12000	0.62	+0.4
2,660,795	+		LRK54_RS12000	0.62	+0.8
2,660,795	+		LRK54_RS12000	0.62	+0.4
2,660,795	+		LRK54_RS12000	0.62	-0.5
2,660,795	+		LRK54_RS12000	0.62	+0.6
2,660,795	+		LRK54_RS12000	0.62	-0.2
2,660,795	+		LRK54_RS12000	0.62	-1.0
2,660,795	+		LRK54_RS12000	0.62	-0.3
2,660,795	+		LRK54_RS12000	0.62	-0.4
2,660,795	+		LRK54_RS12000	0.62	+0.3
2,660,795	+		LRK54_RS12000	0.62	-1.7
2,660,795	+		LRK54_RS12000	0.62	-0.1
2,660,795	+		LRK54_RS12000	0.62	-0.3
2,660,795	+		LRK54_RS12000	0.62	-2.6
2,660,795	+		LRK54_RS12000	0.62	+0.9
2,660,795	+		LRK54_RS12000	0.62	+0.6
2,660,796	-		LRK54_RS12000	0.63	-1.6
2,660,796	-		LRK54_RS12000	0.63	+0.9
2,660,796	-		LRK54_RS12000	0.63	-0.8
2,660,796	-		LRK54_RS12000	0.63	-0.2
2,660,796	-		LRK54_RS12000	0.63	+0.4
2,660,796	-		LRK54_RS12000	0.63	+0.1
2,660,796	-		LRK54_RS12000	0.63	+1.3
2,660,796	-		LRK54_RS12000	0.63	-0.6
2,660,796	-		LRK54_RS12000	0.63	-0.9
2,660,796	-		LRK54_RS12000	0.63	-0.2
2,660,796	-		LRK54_RS12000	0.63	+0.2
2,660,796	-		LRK54_RS12000	0.63	+0.9
2,660,796	-		LRK54_RS12000	0.63	+0.5
2,660,796	-		LRK54_RS12000	0.63	+0.3
2,660,796	-		LRK54_RS12000	0.63	+1.9
2,660,796	-		LRK54_RS12000	0.63	+0.0
2,660,796	-		LRK54_RS12000	0.63	-0.2
2,660,796	-		LRK54_RS12000	0.63	+0.3
2,660,796	-		LRK54_RS12000	0.63	+1.8
2,660,796	-		LRK54_RS12000	0.63	+0.2
2,660,796	-		LRK54_RS12000	0.63	+0.6
2,660,796	-		LRK54_RS12000	0.63	-2.1
2,660,850	+		LRK54_RS12000	0.75	-0.6
2,660,850	+		LRK54_RS12000	0.75	+0.8
2,660,850	+		LRK54_RS12000	0.75	-1.8
2,660,850	+		LRK54_RS12000	0.75	-0.2
2,660,850	+		LRK54_RS12000	0.75	+0.2
2,660,850	+		LRK54_RS12000	0.75	+0.8
2,660,850	+		LRK54_RS12000	0.75	+0.3
2,660,850	+		LRK54_RS12000	0.75	-0.2
2,660,850	+		LRK54_RS12000	0.75	-0.5
2,660,850	+		LRK54_RS12000	0.75	+0.8
2,660,850	+		LRK54_RS12000	0.75	-0.6
2,660,850	+		LRK54_RS12000	0.75	+3.3
2,660,850	+		LRK54_RS12000	0.75	+1.4
2,660,850	+		LRK54_RS12000	0.75	+0.3
2,660,850	+		LRK54_RS12000	0.75	+0.4
2,660,850	+		LRK54_RS12000	0.75	-0.5
2,660,850	+		LRK54_RS12000	0.75	-1.2
2,660,850	+		LRK54_RS12000	0.75	-0.5
2,660,850	+		LRK54_RS12000	0.75	+0.3
2,660,850	+		LRK54_RS12000	0.75	+0.9
2,660,850	+		LRK54_RS12000	0.75	+0.8
2,660,850	+		LRK54_RS12000	0.75	+0.1
2,660,850	+		LRK54_RS12000	0.75	+0.4
2,660,850	+		LRK54_RS12000	0.75	-0.9
2,660,850	+		LRK54_RS12000	0.75	-0.2
2,660,850	+		LRK54_RS12000	0.75	-0.0
2,660,850	+		LRK54_RS12000	0.75	+0.0
2,660,850	+		LRK54_RS12000	0.75	+1.2
2,660,850	+		LRK54_RS12000	0.75	+1.1
2,660,850	+		LRK54_RS12000	0.75	+1.2
2,660,850	+		LRK54_RS12000	0.75	-0.1
2,660,850	+		LRK54_RS12000	0.75	-0.2
2,660,851	-		LRK54_RS12000	0.75	-1.2
2,660,851	-		LRK54_RS12000	0.75	-0.2
2,660,851	-		LRK54_RS12000	0.75	-0.7
2,660,851	-		LRK54_RS12000	0.75	+0.9
2,660,851	-		LRK54_RS12000	0.75	+0.8
2,660,851	-		LRK54_RS12000	0.75	-0.1
2,660,851	-		LRK54_RS12000	0.75	-0.8
2,660,851	-		LRK54_RS12000	0.75	-1.4
2,660,851	-		LRK54_RS12000	0.75	+0.4
2,660,851	-		LRK54_RS12000	0.75	-0.2
2,660,851	-		LRK54_RS12000	0.75	-0.5
2,660,851	-		LRK54_RS12000	0.75	+1.4
2,660,851	-		LRK54_RS12000	0.75	+0.1
2,660,851	-		LRK54_RS12000	0.75	-0.4
2,660,851	-		LRK54_RS12000	0.75	-0.0
2,660,851	-		LRK54_RS12000	0.75	-0.0
2,660,851	-		LRK54_RS12000	0.75	+0.8
2,660,851	-		LRK54_RS12000	0.75	+0.8
2,660,851	-		LRK54_RS12000	0.75	+0.8
2,660,851	-		LRK54_RS12000	0.75	-0.2
2,660,851	-		LRK54_RS12000	0.75	-1.0
2,660,851	-		LRK54_RS12000	0.75	+0.8
2,660,851	-		LRK54_RS12000	0.75	+0.9
2,660,851	-		LRK54_RS12000	0.75	-0.7
2,660,851	-		LRK54_RS12000	0.75	-0.2
2,660,851	-		LRK54_RS12000	0.75	+0.0
2,660,851	-		LRK54_RS12000	0.75	+0.4
2,660,851	-		LRK54_RS12000	0.75	+0.2
2,660,851	-		LRK54_RS12000	0.75	-0.1
2,660,851	-		LRK54_RS12000	0.75	+0.3
2,660,851	-		LRK54_RS12000	0.75	-1.2
2,660,851	-		LRK54_RS12000	0.75	+0.9
2,660,851	-		LRK54_RS12000	0.75	-0.4
2,660,851	-		LRK54_RS12000	0.75	+0.5
2,660,920	+				-1.2
2,660,920	+				-1.8
2,660,920	+				+0.6
2,660,920	+				-0.1
2,660,920	+				+0.2
2,660,920	+				+0.9
2,660,920	+				-1.7
2,660,920	+				-0.7
2,660,920	+				+0.4
2,660,920	+				+1.0
2,660,920	+				+0.6
2,660,920	+				-0.2
2,660,921	-				-0.8
2,660,921	-				-0.2
2,660,921	-				+0.0
2,660,921	-				-0.8
2,660,921	-				-0.2
2,660,921	-				+0.3
2,660,921	-				+0.8
2,660,921	-				+0.4
2,660,921	-				+0.9
2,660,974	+				-1.2
2,661,011	+				-2.4
2,661,011	+				-1.2
2,661,011	+				-1.2
2,661,011	+				-0.6
2,661,011	+				+0.8
2,661,012	-				-1.5
2,661,012	-				-0.2
2,661,012	-				-0.3
2,661,012	-				-0.8
2,661,012	-				+0.8
2,661,012	-				-1.4
2,661,012	-				-0.1
2,661,086	+		LRK54_RS12005	0.12	-0.7
2,661,086	+		LRK54_RS12005	0.12	-1.2
2,661,086	+		LRK54_RS12005	0.12	-0.8
2,661,086	+		LRK54_RS12005	0.12	-1.4
2,661,086	+		LRK54_RS12005	0.12	-0.3
2,661,086	+		LRK54_RS12005	0.12	-1.6
2,661,086	+		LRK54_RS12005	0.12	-1.6
2,661,086	+		LRK54_RS12005	0.12	-2.1
2,661,086	+		LRK54_RS12005	0.12	-1.4
2,661,086	+		LRK54_RS12005	0.12	-1.2
2,661,086	+		LRK54_RS12005	0.12	-0.7
2,661,086	+		LRK54_RS12005	0.12	-1.8
2,661,086	+		LRK54_RS12005	0.12	+0.2
2,661,086	+		LRK54_RS12005	0.12	-1.8
2,661,087	-		LRK54_RS12005	0.12	+0.1
2,661,087	-		LRK54_RS12005	0.12	-2.4
2,661,087	-		LRK54_RS12005	0.12	-1.2
2,661,087	-		LRK54_RS12005	0.12	-1.1
2,661,087	-		LRK54_RS12005	0.12	+0.0
2,661,087	-		LRK54_RS12005	0.12	-0.8
2,661,087	-		LRK54_RS12005	0.12	-0.7
2,661,087	-		LRK54_RS12005	0.12	+0.3
2,661,087	-		LRK54_RS12005	0.12	+0.8
2,661,087	-		LRK54_RS12005	0.12	+0.2
2,661,122	+		LRK54_RS12005	0.16	-1.7
2,661,122	+		LRK54_RS12005	0.16	-0.2
2,661,122	+		LRK54_RS12005	0.16	-1.8
2,661,122	+		LRK54_RS12005	0.16	-1.6
2,661,122	+		LRK54_RS12005	0.16	-1.9
2,661,123	-		LRK54_RS12005	0.16	-0.8
2,661,123	-		LRK54_RS12005	0.16	-1.2
2,661,188	+		LRK54_RS12005	0.23	+0.0
2,661,188	+		LRK54_RS12005	0.23	-0.5
2,661,188	+		LRK54_RS12005	0.23	+0.4
2,661,188	+		LRK54_RS12005	0.23	+0.8
2,661,188	+		LRK54_RS12005	0.23	+1.8
2,661,189	-		LRK54_RS12005	0.23	-1.1
2,661,189	-		LRK54_RS12005	0.23	-1.2
2,661,189	-		LRK54_RS12005	0.23	+0.8
2,661,189	-		LRK54_RS12005	0.23	-0.8
2,661,189	-		LRK54_RS12005	0.23	+0.8
2,661,230	+		LRK54_RS12005	0.28	-2.2
2,661,230	+		LRK54_RS12005	0.28	-1.7
2,661,230	+		LRK54_RS12005	0.28	-2.6
2,661,230	+		LRK54_RS12005	0.28	+0.6
2,661,230	+		LRK54_RS12005	0.28	-1.1
2,661,230	+		LRK54_RS12005	0.28	-0.7
2,661,230	+		LRK54_RS12005	0.28	+0.1
2,661,231	-		LRK54_RS12005	0.28	-2.4
2,661,231	-		LRK54_RS12005	0.28	-3.2
2,661,231	-		LRK54_RS12005	0.28	-0.7