Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1288

Experiment: Cephalothin 3 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 3 mg/ml
1,426,580	+		PfGW456L13_1286	0.75	-0.1
1,426,581	-		PfGW456L13_1286	0.75	+0.8
1,426,581	-		PfGW456L13_1286	0.75	+0.4
1,426,581	-		PfGW456L13_1286	0.75	-1.0
1,426,665	-		PfGW456L13_1286	0.85	+0.9
1,426,978	+		PfGW456L13_1287	0.30	-0.4
1,426,978	+		PfGW456L13_1287	0.30	+0.4
1,426,978	+		PfGW456L13_1287	0.30	-0.8
1,426,978	+		PfGW456L13_1287	0.30	+1.1
1,426,978	+		PfGW456L13_1287	0.30	+0.4
1,426,978	+		PfGW456L13_1287	0.30	-0.5
1,426,979	-		PfGW456L13_1287	0.30	-1.1
1,426,979	-		PfGW456L13_1287	0.30	-1.1
1,426,979	-		PfGW456L13_1287	0.30	+2.7
1,426,979	-		PfGW456L13_1287	0.30	-0.1
1,426,979	-		PfGW456L13_1287	0.30	+0.4
1,426,979	-		PfGW456L13_1287	0.30	-0.5
1,426,979	-		PfGW456L13_1287	0.30	+0.1
1,426,979	-		PfGW456L13_1287	0.30	+1.6
1,427,066	+		PfGW456L13_1287	0.47	+0.1
1,427,066	+		PfGW456L13_1287	0.47	+0.1
1,427,067	-		PfGW456L13_1287	0.48	+1.2
1,427,067	-		PfGW456L13_1287	0.48	+0.2
1,427,067	-		PfGW456L13_1287	0.48	+0.2
1,427,128	+		PfGW456L13_1287	0.60	-0.8
1,427,128	+		PfGW456L13_1287	0.60	-0.1
1,427,128	+		PfGW456L13_1287	0.60	+0.4
1,427,129	-		PfGW456L13_1287	0.60	+0.2
1,427,130	+		PfGW456L13_1287	0.60	+1.1
1,427,130	+		PfGW456L13_1287	0.60	-1.2
1,427,130	+		PfGW456L13_1287	0.60	+0.1
1,427,131	-		PfGW456L13_1287	0.60	+0.3
1,427,131	-		PfGW456L13_1287	0.60	-1.3
1,427,131	-		PfGW456L13_1287	0.60	-0.7
1,427,187	+		PfGW456L13_1287	0.71	-0.5
1,427,187	+		PfGW456L13_1287	0.71	+0.9
1,427,187	+		PfGW456L13_1287	0.71	+0.7
1,427,188	-		PfGW456L13_1287	0.72	-0.2
1,427,188	-		PfGW456L13_1287	0.72	-0.3
1,427,188	-		PfGW456L13_1287	0.72	-0.3
1,427,188	-		PfGW456L13_1287	0.72	+0.4
1,427,220	+		PfGW456L13_1287	0.78	-1.1
1,427,220	+		PfGW456L13_1287	0.78	-0.5
1,427,220	+		PfGW456L13_1287	0.78	+0.9
1,427,220	+		PfGW456L13_1287	0.78	-1.0
1,427,220	+		PfGW456L13_1287	0.78	-0.4
1,427,220	+		PfGW456L13_1287	0.78	+0.2
1,427,221	-		PfGW456L13_1287	0.78	+0.8
1,427,221	-		PfGW456L13_1287	0.78	+2.0
1,427,221	-		PfGW456L13_1287	0.78	-0.3
1,427,221	-		PfGW456L13_1287	0.78	-1.2
1,427,221	-		PfGW456L13_1287	0.78	+0.1
1,427,221	-		PfGW456L13_1287	0.78	+0.1
1,427,221	-		PfGW456L13_1287	0.78	-0.7
1,427,221	-		PfGW456L13_1287	0.78	+0.4
1,427,221	-		PfGW456L13_1287	0.78	+0.5
1,427,241	+		PfGW456L13_1287	0.82	+0.2
1,427,241	+		PfGW456L13_1287	0.82	-0.6
1,427,242	-		PfGW456L13_1287	0.82	-0.2
1,427,242	-		PfGW456L13_1287	0.82	+1.4
1,427,250	+		PfGW456L13_1287	0.84	+0.9
1,427,250	+		PfGW456L13_1287	0.84	-0.3
1,427,250	+		PfGW456L13_1287	0.84	+0.5
1,427,251	-		PfGW456L13_1287	0.84	+0.5
1,427,251	-		PfGW456L13_1287	0.84	+0.6
1,427,251	-		PfGW456L13_1287	0.84	+1.6
1,427,314	+				+0.7
1,427,314	+				-1.6
1,427,391	-				+0.9
1,427,391	-				-1.7
1,427,487	+				+0.0
1,427,487	+				-0.2
1,427,488	-				+0.4
1,427,488	-				-0.0
1,427,488	-				+0.4
1,427,488	-				-0.9
1,427,546	-				-0.2
1,427,552	+				+0.6
1,427,552	+				-0.8
1,427,553	-				-0.2
1,427,576	+				-0.0
1,427,576	+				-0.2
1,427,576	+				-0.1
1,427,576	+				+0.2
1,427,577	-				+0.0
1,427,577	-				-0.3
1,427,604	-				+0.5
1,427,604	-				+0.6
1,427,604	-				-0.2
1,427,715	+		PfGW456L13_1288	0.29	-0.8
1,427,715	+		PfGW456L13_1288	0.29	-1.2
1,427,715	+		PfGW456L13_1288	0.29	-0.5
1,427,716	-		PfGW456L13_1288	0.29	+0.3
1,428,068	+				-0.5
1,428,068	+				-0.4
1,428,068	+				+0.0
1,428,069	-				-0.2
1,428,069	-				-0.5
1,428,069	-				+0.2
1,428,088	+				+0.9
1,428,089	-				+0.3
1,428,150	+				-1.6
1,428,150	+				+1.4
1,428,150	+				-0.5
1,428,151	-				+0.5
1,428,151	-				-0.1
1,428,151	-				-0.6
1,428,151	-				-0.2
1,428,151	-				-1.3
1,428,193	+				-0.4
1,428,193	+				-0.4
1,428,193	+				+0.6
1,428,193	+				-0.2
1,428,193	+				-0.3
1,428,193	+				-0.3
1,428,193	+				+0.5
1,428,193	+				-0.2
1,428,193	+				+0.5
1,428,193	+				-0.2
1,428,193	+				+0.8
1,428,193	+				+0.7
1,428,193	+				-0.4
1,428,193	+				+0.7
1,428,193	+				+0.2
1,428,193	+				+0.2
1,428,193	+				-0.2
1,428,194	-				-1.3
1,428,194	-				+1.0
1,428,194	-				+0.4
1,428,194	-				-0.5
1,428,194	-				-0.1
1,428,194	-				-0.4
1,428,247	+				-0.3
1,428,247	+				-0.2
1,428,247	+				-0.2
1,428,248	-				-0.0
1,428,248	-				+0.2
1,428,248	-				+0.5
1,428,248	-				+0.5
1,428,255	+				-0.1
1,428,256	-				+0.5
1,428,564	-		PfGW456L13_1289	0.35	+0.7
1,428,564	-		PfGW456L13_1289	0.35	+0.1
1,428,599	+		PfGW456L13_1289	0.39	+0.6
1,428,600	-		PfGW456L13_1289	0.39	+0.2
1,428,767	+		PfGW456L13_1289	0.56	+0.3
1,428,767	+		PfGW456L13_1289	0.56	+0.3
1,428,768	-		PfGW456L13_1289	0.56	+0.7
1,429,012	-		PfGW456L13_1289	0.80	-2.2
1,429,098	+		PfGW456L13_1289	0.89	-1.8