Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08750

Experiment: Sisomicin 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_08745 and AO353_08750 are separated by 157 nucleotidesAO353_08750 and AO353_08755 are separated by 100 nucleotides AO353_08745: AO353_08745 - iron ABC transporter substrate-binding protein, at 1,923,443 to 1,924,444 _08745 AO353_08750: AO353_08750 - 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase, at 1,924,602 to 1,925,825 _08750 AO353_08755: AO353_08755 - 2-octaprenyl-6-methoxyphenyl hydroxylase, at 1,925,926 to 1,927,113 _08755 Position (kb) 1924 1925 1926Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6at 1923.707 kb on + strand, within AO353_08745at 1923.707 kb on + strand, within AO353_08745at 1923.707 kb on + strand, within AO353_08745at 1923.707 kb on + strand, within AO353_08745at 1923.707 kb on + strand, within AO353_08745at 1923.707 kb on + strand, within AO353_08745at 1923.707 kb on + strand, within AO353_08745at 1923.708 kb on - strand, within AO353_08745at 1923.780 kb on + strand, within AO353_08745at 1923.780 kb on + strand, within AO353_08745at 1923.780 kb on + strand, within AO353_08745at 1923.780 kb on + strand, within AO353_08745at 1923.780 kb on + strand, within AO353_08745at 1923.780 kb on + strand, within AO353_08745at 1923.781 kb on - strand, within AO353_08745at 1923.781 kb on - strand, within AO353_08745at 1923.781 kb on - strand, within AO353_08745at 1923.781 kb on - strand, within AO353_08745at 1923.781 kb on - strand, within AO353_08745at 1923.781 kb on - strand, within AO353_08745at 1923.781 kb on - strand, within AO353_08745at 1923.783 kb on + strand, within AO353_08745at 1923.783 kb on + strand, within AO353_08745at 1923.783 kb on + strand, within AO353_08745at 1923.783 kb on + strand, within AO353_08745at 1923.783 kb on + strand, within AO353_08745at 1923.783 kb on + strand, within AO353_08745at 1923.783 kb on + strand, within AO353_08745at 1923.783 kb on + strand, within AO353_08745at 1923.783 kb on + strand, within AO353_08745at 1923.783 kb on + strand, within AO353_08745at 1923.783 kb on + strand, within AO353_08745at 1923.783 kb on + strandat 1923.783 kb on + strand, within AO353_08745at 1923.783 kb on + strand, within AO353_08745at 1923.783 kb on + strand, within AO353_08745at 1923.783 kb on + strand, within AO353_08745at 1923.783 kb on + strand, within AO353_08745at 1923.783 kb on + strand, within AO353_08745at 1923.783 kb on + strand, within AO353_08745at 1923.783 kb on + strand, within AO353_08745at 1923.784 kb on - strand, within AO353_08745at 1923.784 kb on - strand, within AO353_08745at 1923.784 kb on - strand, within AO353_08745at 1923.784 kb on - strand, within AO353_08745at 1923.784 kb on - strand, within AO353_08745at 1923.784 kb on - strand, within AO353_08745at 1923.784 kb on - strand, within AO353_08745at 1923.784 kb on - strand, within AO353_08745at 1923.784 kb on - strand, within AO353_08745at 1923.784 kb on - strand, within AO353_08745at 1923.784 kb on - strand, within AO353_08745at 1923.784 kb on - strand, within AO353_08745at 1923.784 kb on - strand, within AO353_08745at 1923.784 kb on - strand, within AO353_08745at 1923.784 kb on - strand, within AO353_08745at 1923.784 kb on - strand, within AO353_08745at 1923.784 kb on - strand, within AO353_08745at 1923.784 kb on - strand, within AO353_08745at 1923.784 kb on - strand, within AO353_08745at 1923.784 kb on - strand, within AO353_08745at 1923.784 kb on - strand, within AO353_08745at 1923.784 kb on - strand, within AO353_08745at 1923.786 kb on + strand, within AO353_08745at 1923.786 kb on + strand, within AO353_08745at 1923.786 kb on + strand, within AO353_08745at 1923.786 kb on + strand, within AO353_08745at 1923.786 kb on + strand, within AO353_08745at 1923.786 kb on + strand, within AO353_08745at 1923.786 kb on + strand, within AO353_08745at 1923.786 kb on + strand, within AO353_08745at 1923.786 kb on + strand, within AO353_08745at 1923.786 kb on + strand, within AO353_08745at 1923.786 kb on + strand, within AO353_08745at 1923.786 kb on + strand, within AO353_08745at 1923.786 kb on + strand, within AO353_08745at 1923.786 kb on + strand, within AO353_08745at 1923.786 kb on + strand, within AO353_08745at 1923.786 kb on + strand, within AO353_08745at 1923.786 kb on + strand, within AO353_08745at 1923.786 kb on + strand, within AO353_08745at 1923.786 kb on + strand, within AO353_08745at 1923.786 kb on + strand, within AO353_08745at 1923.786 kb on + strand, within AO353_08745at 1923.786 kb on + strand, within AO353_08745at 1923.786 kb on + strand, within AO353_08745at 1923.786 kb on + strand, within AO353_08745at 1923.786 kb on + strand, within AO353_08745at 1923.787 kb on - strand, within AO353_08745at 1923.787 kb on - strand, within AO353_08745at 1923.787 kb on - strand, within AO353_08745at 1923.787 kb on - strand, within AO353_08745at 1923.787 kb on - strand, within AO353_08745at 1923.787 kb on - strand, within AO353_08745at 1923.787 kb on - strand, within AO353_08745at 1923.787 kb on - strand, within AO353_08745at 1923.787 kb on - strand, within AO353_08745at 1923.787 kb on - strand, within AO353_08745at 1923.787 kb on - strand, within AO353_08745at 1923.787 kb on - strand, within AO353_08745at 1923.954 kb on + strand, within AO353_08745at 1923.954 kb on + strand, within AO353_08745at 1923.954 kb on + strand, within AO353_08745at 1923.954 kb on + strand, within AO353_08745at 1923.954 kb on + strand, within AO353_08745at 1923.954 kb on + strand, within AO353_08745at 1923.954 kb on + strand, within AO353_08745at 1923.954 kb on + strand, within AO353_08745at 1923.954 kb on + strand, within AO353_08745at 1923.954 kb on + strand, within AO353_08745at 1923.954 kb on + strand, within AO353_08745at 1923.954 kb on + strand, within AO353_08745at 1923.955 kb on - strand, within AO353_08745at 1923.955 kb on - strand, within AO353_08745at 1923.955 kb on - strand, within AO353_08745at 1923.955 kb on - strand, within AO353_08745at 1923.955 kb on - strand, within AO353_08745at 1923.955 kb on - strand, within AO353_08745at 1923.955 kb on - strand, within AO353_08745at 1923.955 kb on - strand, within AO353_08745at 1923.955 kb on - strand, within AO353_08745at 1923.955 kb on - strand, within AO353_08745at 1923.971 kb on - strand, within AO353_08745at 1924.017 kb on + strand, within AO353_08745at 1924.017 kb on + strand, within AO353_08745at 1924.017 kb on + strand, within AO353_08745at 1924.017 kb on + strand, within AO353_08745at 1924.017 kb on + strand, within AO353_08745at 1924.017 kb on + strand, within AO353_08745at 1924.017 kb on + strand, within AO353_08745at 1924.017 kb on + strand, within AO353_08745at 1924.017 kb on + strand, within AO353_08745at 1924.017 kb on + strand, within AO353_08745at 1924.017 kb on + strand, within AO353_08745at 1924.017 kb on + strand, within AO353_08745at 1924.017 kb on + strand, within AO353_08745at 1924.018 kb on - strand, within AO353_08745at 1924.018 kb on - strand, within AO353_08745at 1924.018 kb on - strand, within AO353_08745at 1924.018 kb on - strand, within AO353_08745at 1924.018 kb on - strand, within AO353_08745at 1924.018 kb on - strand, within AO353_08745at 1924.018 kb on - strand, within AO353_08745at 1924.018 kb on - strand, within AO353_08745at 1924.018 kb on - strand, within AO353_08745at 1924.018 kb on - strand, within AO353_08745at 1924.018 kb on - strand, within AO353_08745at 1924.018 kb on - strand, within AO353_08745at 1924.018 kb on - strand, within AO353_08745at 1924.018 kb on - strand, within AO353_08745at 1924.018 kb on - strand, within AO353_08745at 1924.018 kb on - strand, within AO353_08745at 1924.018 kb on - strand, within AO353_08745at 1924.018 kb on - strand, within AO353_08745at 1924.040 kb on + strand, within AO353_08745at 1924.056 kb on + strand, within AO353_08745at 1924.056 kb on + strand, within AO353_08745at 1924.056 kb on + strand, within AO353_08745at 1924.056 kb on + strand, within AO353_08745at 1924.057 kb on - strand, within AO353_08745at 1924.113 kb on + strand, within AO353_08745at 1924.296 kb on - strand, within AO353_08745at 1924.314 kb on + strand, within AO353_08745at 1924.314 kb on + strand, within AO353_08745at 1924.314 kb on + strand, within AO353_08745at 1924.314 kb on + strand, within AO353_08745at 1924.314 kb on + strand, within AO353_08745at 1924.314 kb on + strand, within AO353_08745at 1924.314 kb on + strand, within AO353_08745at 1924.314 kb on + strand, within AO353_08745at 1924.314 kb on + strand, within AO353_08745at 1924.314 kb on + strand, within AO353_08745at 1924.314 kb on - strand, within AO353_08745at 1924.315 kb on - strand, within AO353_08745at 1924.315 kb on - strand, within AO353_08745at 1924.315 kb on - strand, within AO353_08745at 1924.315 kb on - strand, within AO353_08745at 1924.315 kb on - strand, within AO353_08745at 1924.315 kb on - strand, within AO353_08745at 1924.315 kb on - strand, within AO353_08745at 1924.315 kb on - strand, within AO353_08745at 1924.315 kb on - strand, within AO353_08745at 1924.359 kb on + strandat 1924.359 kb on + strandat 1924.359 kb on + strandat 1924.359 kb on + strandat 1924.360 kb on - strandat 1924.360 kb on - strandat 1924.360 kb on - strandat 1924.360 kb on - strandat 1924.424 kb on + strandat 1924.425 kb on - strandat 1924.529 kb on + strandat 1924.529 kb on + strandat 1924.530 kb on - strandat 1924.530 kb on - strandat 1924.530 kb on - strandat 1924.593 kb on + strandat 1924.593 kb on + strandat 1924.593 kb on + strandat 1924.593 kb on + strandat 1924.593 kb on + strandat 1924.593 kb on + strandat 1924.593 kb on + strandat 1924.593 kb on + strandat 1924.594 kb on - strandat 1924.594 kb on - strandat 1924.594 kb on - strandat 1924.594 kb on - strandat 1924.594 kb on - strandat 1925.831 kb on - strandat 1925.831 kb on - strandat 1925.831 kb on - strandat 1925.831 kb on - strandat 1925.831 kb on - strandat 1925.831 kb on - strandat 1925.864 kb on - strandat 1925.864 kb on - strandat 1925.864 kb on - strandat 1925.864 kb on - strandat 1925.864 kb on - strandat 1925.899 kb on + strandat 1925.899 kb on + strandat 1925.899 kb on + strandat 1925.899 kb on + strandat 1925.899 kb on + strandat 1925.900 kb on - strandat 1925.900 kb on - strandat 1925.900 kb on - strandat 1925.903 kb on + strandat 1925.903 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml
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1,923,707 + AO353_08745 0.26 +1.7
1,923,707 + AO353_08745 0.26 -0.8
1,923,707 + AO353_08745 0.26 +0.4
1,923,707 + AO353_08745 0.26 -2.4
1,923,707 + AO353_08745 0.26 +0.4
1,923,707 + AO353_08745 0.26 -0.8
1,923,707 + AO353_08745 0.26 +0.4
1,923,708 - AO353_08745 0.26 +0.2
1,923,780 + AO353_08745 0.34 +1.5
1,923,780 + AO353_08745 0.34 +0.8
1,923,780 + AO353_08745 0.34 +0.8
1,923,780 + AO353_08745 0.34 -0.5
1,923,780 + AO353_08745 0.34 +1.6
1,923,780 + AO353_08745 0.34 -0.5
1,923,781 - AO353_08745 0.34 -0.4
1,923,781 - AO353_08745 0.34 -0.2
1,923,781 - AO353_08745 0.34 +0.3
1,923,781 - AO353_08745 0.34 -0.7
1,923,781 - AO353_08745 0.34 -0.3
1,923,781 - AO353_08745 0.34 -1.6
1,923,781 - AO353_08745 0.34 +0.8
1,923,783 + AO353_08745 0.34 -0.4
1,923,783 + AO353_08745 0.34 -0.6
1,923,783 + AO353_08745 0.34 +1.1
1,923,783 + AO353_08745 0.34 -1.2
1,923,783 + AO353_08745 0.34 +0.1
1,923,783 + AO353_08745 0.34 -0.5
1,923,783 + AO353_08745 0.34 -0.7
1,923,783 + AO353_08745 0.34 +0.1
1,923,783 + AO353_08745 0.34 -1.2
1,923,783 + AO353_08745 0.34 -0.6
1,923,783 + AO353_08745 0.34 +0.1
1,923,783 + +4.2
1,923,783 + AO353_08745 0.34 -0.1
1,923,783 + AO353_08745 0.34 +0.8
1,923,783 + AO353_08745 0.34 +0.3
1,923,783 + AO353_08745 0.34 -0.4
1,923,783 + AO353_08745 0.34 +0.1
1,923,783 + AO353_08745 0.34 -1.1
1,923,783 + AO353_08745 0.34 -0.2
1,923,783 + AO353_08745 0.34 -1.3
1,923,784 - AO353_08745 0.34 +0.1
1,923,784 - AO353_08745 0.34 -1.2
1,923,784 - AO353_08745 0.34 -1.1
1,923,784 - AO353_08745 0.34 -0.1
1,923,784 - AO353_08745 0.34 -0.5
1,923,784 - AO353_08745 0.34 +2.3
1,923,784 - AO353_08745 0.34 +1.9
1,923,784 - AO353_08745 0.34 -0.8
1,923,784 - AO353_08745 0.34 -0.4
1,923,784 - AO353_08745 0.34 -1.1
1,923,784 - AO353_08745 0.34 +0.1
1,923,784 - AO353_08745 0.34 -1.5
1,923,784 - AO353_08745 0.34 -1.0
1,923,784 - AO353_08745 0.34 +0.9
1,923,784 - AO353_08745 0.34 -0.2
1,923,784 - AO353_08745 0.34 -0.7
1,923,784 - AO353_08745 0.34 -1.2
1,923,784 - AO353_08745 0.34 -0.8
1,923,784 - AO353_08745 0.34 +1.3
1,923,784 - AO353_08745 0.34 +3.3
1,923,784 - AO353_08745 0.34 +0.9
1,923,784 - AO353_08745 0.34 -1.5
1,923,786 + AO353_08745 0.34 -0.1
1,923,786 + AO353_08745 0.34 +1.3
1,923,786 + AO353_08745 0.34 +0.3
1,923,786 + AO353_08745 0.34 +1.3
1,923,786 + AO353_08745 0.34 -0.2
1,923,786 + AO353_08745 0.34 -1.2
1,923,786 + AO353_08745 0.34 +0.4
1,923,786 + AO353_08745 0.34 +0.5
1,923,786 + AO353_08745 0.34 -0.4
1,923,786 + AO353_08745 0.34 +1.0
1,923,786 + AO353_08745 0.34 -1.8
1,923,786 + AO353_08745 0.34 -0.2
1,923,786 + AO353_08745 0.34 -1.2
1,923,786 + AO353_08745 0.34 +0.6
1,923,786 + AO353_08745 0.34 +0.1
1,923,786 + AO353_08745 0.34 -2.2
1,923,786 + AO353_08745 0.34 +0.6
1,923,786 + AO353_08745 0.34 -0.7
1,923,786 + AO353_08745 0.34 -0.8
1,923,786 + AO353_08745 0.34 +1.1
1,923,786 + AO353_08745 0.34 -1.9
1,923,786 + AO353_08745 0.34 +0.3
1,923,786 + AO353_08745 0.34 +0.1
1,923,786 + AO353_08745 0.34 +0.9
1,923,786 + AO353_08745 0.34 +1.8
1,923,787 - AO353_08745 0.34 +0.2
1,923,787 - AO353_08745 0.34 -1.2
1,923,787 - AO353_08745 0.34 -1.0
1,923,787 - AO353_08745 0.34 +1.1
1,923,787 - AO353_08745 0.34 -1.6
1,923,787 - AO353_08745 0.34 +0.8
1,923,787 - AO353_08745 0.34 -0.0
1,923,787 - AO353_08745 0.34 -0.9
1,923,787 - AO353_08745 0.34 -2.2
1,923,787 - AO353_08745 0.34 +0.8
1,923,787 - AO353_08745 0.34 -0.2
1,923,787 - AO353_08745 0.34 -0.5
1,923,954 + AO353_08745 0.51 +0.9
1,923,954 + AO353_08745 0.51 -0.2
1,923,954 + AO353_08745 0.51 +0.2
1,923,954 + AO353_08745 0.51 -0.1
1,923,954 + AO353_08745 0.51 -2.2
1,923,954 + AO353_08745 0.51 -0.2
1,923,954 + AO353_08745 0.51 -0.7
1,923,954 + AO353_08745 0.51 -0.3
1,923,954 + AO353_08745 0.51 -0.1
1,923,954 + AO353_08745 0.51 +0.6
1,923,954 + AO353_08745 0.51 +0.5
1,923,954 + AO353_08745 0.51 -1.5
1,923,955 - AO353_08745 0.51 -1.4
1,923,955 - AO353_08745 0.51 -0.4
1,923,955 - AO353_08745 0.51 +0.1
1,923,955 - AO353_08745 0.51 -1.1
1,923,955 - AO353_08745 0.51 -0.9
1,923,955 - AO353_08745 0.51 -0.8
1,923,955 - AO353_08745 0.51 -0.9
1,923,955 - AO353_08745 0.51 -0.7
1,923,955 - AO353_08745 0.51 -0.1
1,923,955 - AO353_08745 0.51 +1.5
1,923,971 - AO353_08745 0.53 -0.5
1,924,017 + AO353_08745 0.57 +1.3
1,924,017 + AO353_08745 0.57 +0.1
1,924,017 + AO353_08745 0.57 +0.1
1,924,017 + AO353_08745 0.57 +1.3
1,924,017 + AO353_08745 0.57 -3.2
1,924,017 + AO353_08745 0.57 +0.8
1,924,017 + AO353_08745 0.57 -0.1
1,924,017 + AO353_08745 0.57 +1.6
1,924,017 + AO353_08745 0.57 -1.3
1,924,017 + AO353_08745 0.57 -0.0
1,924,017 + AO353_08745 0.57 -0.2
1,924,017 + AO353_08745 0.57 +0.9
1,924,017 + AO353_08745 0.57 -1.8
1,924,018 - AO353_08745 0.57 +0.0
1,924,018 - AO353_08745 0.57 -1.8
1,924,018 - AO353_08745 0.57 +1.9
1,924,018 - AO353_08745 0.57 +0.5
1,924,018 - AO353_08745 0.57 +1.9
1,924,018 - AO353_08745 0.57 +0.7
1,924,018 - AO353_08745 0.57 +0.7
1,924,018 - AO353_08745 0.57 -1.5
1,924,018 - AO353_08745 0.57 +0.9
1,924,018 - AO353_08745 0.57 -0.6
1,924,018 - AO353_08745 0.57 +0.3
1,924,018 - AO353_08745 0.57 -1.6
1,924,018 - AO353_08745 0.57 -0.6
1,924,018 - AO353_08745 0.57 -0.1
1,924,018 - AO353_08745 0.57 -2.0
1,924,018 - AO353_08745 0.57 +1.5
1,924,018 - AO353_08745 0.57 -0.9
1,924,018 - AO353_08745 0.57 -1.2
1,924,040 + AO353_08745 0.60 +1.9
1,924,056 + AO353_08745 0.61 -1.0
1,924,056 + AO353_08745 0.61 +1.7
1,924,056 + AO353_08745 0.61 +0.3
1,924,056 + AO353_08745 0.61 +2.1
1,924,057 - AO353_08745 0.61 +0.2
1,924,113 + AO353_08745 0.67 -1.4
1,924,296 - AO353_08745 0.85 +0.1
1,924,314 + AO353_08745 0.87 +2.2
1,924,314 + AO353_08745 0.87 -0.3
1,924,314 + AO353_08745 0.87 -2.9
1,924,314 + AO353_08745 0.87 +1.0
1,924,314 + AO353_08745 0.87 -0.4
1,924,314 + AO353_08745 0.87 +1.2
1,924,314 + AO353_08745 0.87 +1.3
1,924,314 + AO353_08745 0.87 -0.1
1,924,314 + AO353_08745 0.87 -0.1
1,924,314 + AO353_08745 0.87 +0.6
1,924,314 - AO353_08745 0.87 -0.2
1,924,315 - AO353_08745 0.87 +2.2
1,924,315 - AO353_08745 0.87 +0.8
1,924,315 - AO353_08745 0.87 -1.2
1,924,315 - AO353_08745 0.87 -0.0
1,924,315 - AO353_08745 0.87 +0.2
1,924,315 - AO353_08745 0.87 +0.2
1,924,315 - AO353_08745 0.87 -1.1
1,924,315 - AO353_08745 0.87 -1.9
1,924,315 - AO353_08745 0.87 +1.4
1,924,359 + -0.4
1,924,359 + -1.9
1,924,359 + -1.0
1,924,359 + +1.0
1,924,360 - -1.1
1,924,360 - +0.5
1,924,360 - +0.5
1,924,360 - -1.1
1,924,424 + +0.5
1,924,425 - -1.8
1,924,529 + -1.4
1,924,529 + +0.7
1,924,530 - +1.9
1,924,530 - -0.2
1,924,530 - -0.7
1,924,593 + -0.8
1,924,593 + -1.3
1,924,593 + -0.3
1,924,593 + +0.3
1,924,593 + -0.6
1,924,593 + -0.5
1,924,593 + -1.2
1,924,593 + -0.6
1,924,594 - -1.0
1,924,594 - -0.4
1,924,594 - +0.0
1,924,594 - +1.1
1,924,594 - -0.8
1,925,831 - -0.7
1,925,831 - +3.3
1,925,831 - +6.5
1,925,831 - +2.6
1,925,831 - +1.6
1,925,831 - +1.2
1,925,864 - +2.2
1,925,864 - +2.0
1,925,864 - -0.9
1,925,864 - -1.2
1,925,864 - -0.5
1,925,899 + +5.5
1,925,899 + +4.3
1,925,899 + +4.3
1,925,899 + +2.6
1,925,899 + +6.0
1,925,900 - -1.2
1,925,900 - +1.0
1,925,900 - +1.7
1,925,903 + +5.6
1,925,903 + +5.9

Or see this region's nucleotide sequence