Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_10895

Experiment: nitrate 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 200 mM
2,378,728	+		AO353_10890	0.22	+0.3
2,379,383	-		AO353_10890	0.87	-0.5
2,379,417	+				-0.3
2,379,417	+				+0.6
2,379,417	+				-0.4
2,379,417	+				+0.6
2,379,418	-				+0.1
2,379,418	-				+0.5
2,379,419	+				-0.1
2,379,419	+				-0.1
2,379,419	+				-0.6
2,379,419	+				+0.7
2,379,419	+				-0.3
2,379,419	+				-0.2
2,379,419	+				-0.8
2,379,420	-				-2.0
2,379,420	-				+0.7
2,379,420	-				-1.3
2,379,420	-				-0.5
2,379,448	+				+0.9
2,379,448	+				+1.1
2,379,449	-				-0.5
2,379,467	-				+0.4
2,379,486	+				-0.7
2,379,487	-				-0.2
2,379,493	+				+0.6
2,379,519	+				+0.4
2,379,519	+				+0.7
2,379,520	-				-1.6
2,379,520	-				-0.1
2,379,576	+				+1.5
2,379,576	+				+0.1
2,379,576	+				+1.5
2,379,577	-				-0.2
2,379,577	-				-2.1
2,379,577	-				+0.0
2,379,577	-				+1.2
2,379,577	-				-0.4
2,379,577	-				+0.1
2,379,589	+				+0.0
2,379,589	+				+0.2
2,379,590	-				-1.9
2,379,590	-				-1.4
2,379,590	-				-1.0
2,379,599	+				+1.5
2,379,599	+				-0.6
2,379,599	+				-0.2
2,379,607	-				+1.3
2,379,635	+				-0.4
2,379,635	+				-1.0
2,379,636	-				-0.6
2,379,660	+				-0.4
2,379,661	-				+2.0
2,379,661	-				+0.1
2,379,694	+				+0.7
2,379,694	+				+2.7
2,379,694	+				-1.5
2,379,694	+				+2.8
2,379,694	+				-0.6
2,379,694	+				+1.1
2,379,694	+				+0.2
2,379,694	+				-1.3
2,379,694	+				-0.2
2,379,694	+				-0.2
2,379,694	+				-1.0
2,379,694	+				-1.5
2,379,695	-				+1.5
2,379,695	-				+0.6
2,379,695	-				+0.3
2,379,695	-				-0.0
2,379,695	-				-0.6
2,379,695	-				+1.3
2,379,727	+				-0.3
2,379,727	+				+2.7
2,379,728	-				-2.0
2,379,728	-				-0.5
2,379,728	-				+1.4
2,379,728	-				-1.4
2,379,728	-				+0.5
2,379,853	+		AO353_10895	0.18	+0.4
2,379,854	-		AO353_10895	0.18	-0.4
2,379,896	-		AO353_10895	0.24	-0.1
2,379,896	-		AO353_10895	0.24	+0.6
2,379,896	-		AO353_10895	0.24	-1.5
2,379,896	-		AO353_10895	0.24	-0.4
2,380,198	+		AO353_10895	0.66	+0.2
2,380,198	+		AO353_10895	0.66	-0.3
2,380,198	+		AO353_10895	0.66	-0.1
2,380,198	+		AO353_10895	0.66	+1.1
2,380,198	+		AO353_10895	0.66	+0.9
2,380,199	-		AO353_10895	0.66	-2.7
2,380,199	-		AO353_10895	0.66	+1.3
2,380,199	-		AO353_10895	0.66	+0.0
2,380,199	-		AO353_10895	0.66	-1.2
2,380,199	-		AO353_10895	0.66	+0.8
2,380,199	-		AO353_10895	0.66	-1.3
2,380,222	+		AO353_10895	0.69	+0.6
2,380,222	+		AO353_10895	0.69	+1.0
2,380,222	+		AO353_10895	0.69	-0.4
2,380,223	-		AO353_10895	0.70	+0.2
2,380,223	-		AO353_10895	0.70	-0.2
2,380,390	-				-0.8
2,380,600	+		AO353_10900	0.16	-0.5
2,380,601	-		AO353_10900	0.16	-0.3
2,380,601	-		AO353_10900	0.16	-2.5
2,380,603	-		AO353_10900	0.16	-0.8
2,380,603	-		AO353_10900	0.16	-0.8
2,380,689	+		AO353_10900	0.27	+0.5
2,380,689	+		AO353_10900	0.27	+0.6
2,380,689	+		AO353_10900	0.27	-0.0
2,380,689	+		AO353_10900	0.27	+0.6
2,380,690	-		AO353_10900	0.27	+1.2
2,380,690	-		AO353_10900	0.27	+0.4
2,380,690	-		AO353_10900	0.27	+1.6
2,380,690	-		AO353_10900	0.27	-0.1
2,380,690	-		AO353_10900	0.27	+0.2
2,380,690	-		AO353_10900	0.27	-1.0
2,380,690	-		AO353_10900	0.27	-1.9
2,380,925	+		AO353_10900	0.57	-0.3
2,380,925	+		AO353_10900	0.57	-1.3
2,380,925	+		AO353_10900	0.57	-0.5
2,380,925	+		AO353_10900	0.57	-0.5
2,380,925	+		AO353_10900	0.57	+0.0
2,380,925	+		AO353_10900	0.57	-0.9
2,380,926	-		AO353_10900	0.57	+0.4
2,380,926	-		AO353_10900	0.57	-0.5
2,380,926	-		AO353_10900	0.57	-2.0
2,380,926	-		AO353_10900	0.57	-0.8
2,380,926	-		AO353_10900	0.57	+0.0
2,380,963	+		AO353_10900	0.62	-0.2
2,380,963	+		AO353_10900	0.62	+1.0
2,380,963	+		AO353_10900	0.62	+0.8
2,380,963	+		AO353_10900	0.62	+0.8
2,380,963	+		AO353_10900	0.62	-0.1
2,380,963	+		AO353_10900	0.62	-1.3
2,380,963	+		AO353_10900	0.62	+1.8
2,380,963	+		AO353_10900	0.62	-0.4
2,380,963	+		AO353_10900	0.62	+0.8
2,380,963	+		AO353_10900	0.62	+0.5
2,380,963	+		AO353_10900	0.62	-1.0
2,380,963	+		AO353_10900	0.62	-1.6
2,380,963	+		AO353_10900	0.62	-0.4
2,380,963	+		AO353_10900	0.62	+0.4
2,380,963	+		AO353_10900	0.62	+1.0
2,380,963	+		AO353_10900	0.62	-0.3
2,380,963	+		AO353_10900	0.62	+0.6
2,380,963	+		AO353_10900	0.62	+0.0
2,380,964	-		AO353_10900	0.62	-2.1
2,380,964	-		AO353_10900	0.62	-1.7
2,380,964	-		AO353_10900	0.62	-1.0
2,380,964	-		AO353_10900	0.62	-1.6
2,380,964	-		AO353_10900	0.62	+0.4
2,380,964	-		AO353_10900	0.62	-1.0
2,380,964	-		AO353_10900	0.62	+0.0
2,380,964	-		AO353_10900	0.62	+0.3
2,380,964	-		AO353_10900	0.62	+2.7
2,380,964	-		AO353_10900	0.62	-1.6
2,380,964	-		AO353_10900	0.62	+0.4
2,380,964	-		AO353_10900	0.62	-0.5
2,380,964	-		AO353_10900	0.62	-2.3
2,380,964	-		AO353_10900	0.62	-0.6
2,380,964	-		AO353_10900	0.62	-1.2
2,380,964	-		AO353_10900	0.62	-1.3
2,380,966	+		AO353_10900	0.62	-0.1
2,380,966	+		AO353_10900	0.62	-0.2
2,380,967	-		AO353_10900	0.62	-0.6
2,380,967	-		AO353_10900	0.62	-1.6
2,380,967	-		AO353_10900	0.62	-0.2
2,380,967	-		AO353_10900	0.62	-1.0
2,381,168	+		AO353_10900	0.88	+1.5
2,381,168	+		AO353_10900	0.88	-0.6
2,381,246	+				-2.2
2,381,246	+				+0.0
2,381,246	+				+0.5
2,381,246	+				+0.2
2,381,246	+				-0.3
2,381,246	+				-1.2
2,381,247	-				-0.1
2,381,247	-				-1.6
2,381,247	-				-1.6
2,381,247	-				-0.8
2,381,247	-				-1.0
2,381,361	+		AO353_10905	0.13	+0.0
2,381,361	+		AO353_10905	0.13	-0.3
2,381,361	+		AO353_10905	0.13	+0.4
2,381,362	-		AO353_10905	0.13	-0.1
2,381,362	-		AO353_10905	0.13	-0.3
2,381,362	-		AO353_10905	0.13	-1.3
2,381,362	-		AO353_10905	0.13	-0.4