Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS07780

Experiment: Chlorite 0.32 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS07770 and ABZR86_RS07775 are separated by 15 nucleotidesABZR86_RS07775 and ABZR86_RS07780 are separated by 52 nucleotidesABZR86_RS07780 and ABZR86_RS07785 are separated by 123 nucleotides ABZR86_RS07770: ABZR86_RS07770 - methylated-DNA--[protein]-cysteine S-methyltransferase, at 1,729,563 to 1,730,072 _RS07770 ABZR86_RS07775: ABZR86_RS07775 - hypothetical protein, at 1,730,088 to 1,730,576 _RS07775 ABZR86_RS07780: ABZR86_RS07780 - ectonucleotide pyrophosphatase/phosphodiesterase, at 1,730,629 to 1,731,891 _RS07780 ABZR86_RS07785: ABZR86_RS07785 - MFS transporter, at 1,732,015 to 1,733,274 _RS07785 Position (kb) 1730 1731 1732Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1729.743 kb on + strand, within ABZR86_RS07770at 1729.744 kb on - strand, within ABZR86_RS07770at 1729.857 kb on + strand, within ABZR86_RS07770at 1729.858 kb on - strand, within ABZR86_RS07770at 1729.858 kb on - strand, within ABZR86_RS07770at 1729.858 kb on - strand, within ABZR86_RS07770at 1729.858 kb on - strand, within ABZR86_RS07770at 1729.858 kb on - strand, within ABZR86_RS07770at 1730.446 kb on + strand, within ABZR86_RS07775at 1730.447 kb on - strand, within ABZR86_RS07775at 1730.447 kb on - strand, within ABZR86_RS07775at 1730.447 kb on - strand, within ABZR86_RS07775at 1730.458 kb on + strand, within ABZR86_RS07775at 1730.458 kb on + strand, within ABZR86_RS07775at 1730.459 kb on - strand, within ABZR86_RS07775at 1730.459 kb on - strand, within ABZR86_RS07775at 1730.567 kb on + strandat 1730.567 kb on + strandat 1730.568 kb on - strandat 1730.568 kb on - strandat 1730.568 kb on - strandat 1730.568 kb on - strandat 1730.576 kb on + strandat 1730.576 kb on + strandat 1730.576 kb on + strandat 1730.576 kb on + strandat 1730.776 kb on + strand, within ABZR86_RS07780at 1730.776 kb on + strand, within ABZR86_RS07780at 1730.776 kb on + strand, within ABZR86_RS07780at 1730.777 kb on - strand, within ABZR86_RS07780at 1730.777 kb on - strand, within ABZR86_RS07780at 1730.777 kb on - strand, within ABZR86_RS07780at 1730.777 kb on - strand, within ABZR86_RS07780at 1730.881 kb on + strand, within ABZR86_RS07780at 1730.881 kb on + strand, within ABZR86_RS07780at 1730.881 kb on + strand, within ABZR86_RS07780at 1730.881 kb on + strand, within ABZR86_RS07780at 1730.882 kb on - strand, within ABZR86_RS07780at 1730.882 kb on - strand, within ABZR86_RS07780at 1730.882 kb on - strand, within ABZR86_RS07780at 1730.882 kb on - strand, within ABZR86_RS07780at 1731.097 kb on + strand, within ABZR86_RS07780at 1731.098 kb on - strand, within ABZR86_RS07780at 1731.121 kb on + strand, within ABZR86_RS07780at 1731.121 kb on + strand, within ABZR86_RS07780at 1731.122 kb on - strand, within ABZR86_RS07780at 1731.214 kb on + strand, within ABZR86_RS07780at 1731.214 kb on + strand, within ABZR86_RS07780at 1731.214 kb on + strand, within ABZR86_RS07780at 1731.214 kb on + strand, within ABZR86_RS07780at 1731.214 kb on + strand, within ABZR86_RS07780at 1731.215 kb on - strand, within ABZR86_RS07780at 1731.215 kb on - strand, within ABZR86_RS07780at 1731.215 kb on - strand, within ABZR86_RS07780at 1731.537 kb on + strand, within ABZR86_RS07780at 1731.537 kb on + strand, within ABZR86_RS07780at 1731.537 kb on + strand, within ABZR86_RS07780at 1731.537 kb on + strand, within ABZR86_RS07780at 1731.537 kb on + strand, within ABZR86_RS07780at 1731.538 kb on - strand, within ABZR86_RS07780at 1731.538 kb on - strand, within ABZR86_RS07780at 1731.538 kb on - strand, within ABZR86_RS07780at 1731.538 kb on - strand, within ABZR86_RS07780at 1731.652 kb on + strand, within ABZR86_RS07780at 1731.653 kb on - strand, within ABZR86_RS07780at 1731.653 kb on - strand, within ABZR86_RS07780at 1731.653 kb on - strand, within ABZR86_RS07780at 1731.653 kb on - strand, within ABZR86_RS07780at 1731.653 kb on - strand, within ABZR86_RS07780at 1731.653 kb on - strand, within ABZR86_RS07780at 1731.805 kb on + strandat 1731.806 kb on - strandat 1731.806 kb on - strandat 1731.914 kb on - strandat 1732.016 kb on + strandat 1732.016 kb on + strandat 1732.016 kb on + strandat 1732.016 kb on + strandat 1732.017 kb on - strandat 1732.017 kb on - strandat 1732.160 kb on + strand, within ABZR86_RS07785at 1732.160 kb on + strand, within ABZR86_RS07785at 1732.160 kb on + strand, within ABZR86_RS07785at 1732.160 kb on + strand, within ABZR86_RS07785at 1732.160 kb on + strand, within ABZR86_RS07785at 1732.160 kb on + strand, within ABZR86_RS07785at 1732.161 kb on - strand, within ABZR86_RS07785at 1732.161 kb on - strand, within ABZR86_RS07785at 1732.161 kb on - strand, within ABZR86_RS07785at 1732.202 kb on + strand, within ABZR86_RS07785at 1732.202 kb on + strand, within ABZR86_RS07785at 1732.202 kb on + strand, within ABZR86_RS07785at 1732.202 kb on + strand, within ABZR86_RS07785at 1732.203 kb on - strand, within ABZR86_RS07785at 1732.203 kb on - strand, within ABZR86_RS07785at 1732.205 kb on + strand, within ABZR86_RS07785at 1732.205 kb on + strand, within ABZR86_RS07785at 1732.218 kb on - strand, within ABZR86_RS07785at 1732.218 kb on - strand, within ABZR86_RS07785at 1732.324 kb on + strand, within ABZR86_RS07785at 1732.463 kb on + strand, within ABZR86_RS07785at 1732.541 kb on + strand, within ABZR86_RS07785at 1732.541 kb on + strand, within ABZR86_RS07785at 1732.541 kb on + strand, within ABZR86_RS07785at 1732.542 kb on - strand, within ABZR86_RS07785at 1732.542 kb on - strand, within ABZR86_RS07785at 1732.542 kb on - strand, within ABZR86_RS07785at 1732.542 kb on - strand, within ABZR86_RS07785at 1732.820 kb on + strand, within ABZR86_RS07785at 1732.820 kb on + strand, within ABZR86_RS07785at 1732.820 kb on + strand, within ABZR86_RS07785at 1732.820 kb on + strand, within ABZR86_RS07785at 1732.820 kb on + strand, within ABZR86_RS07785at 1732.821 kb on - strand, within ABZR86_RS07785at 1732.821 kb on - strand, within ABZR86_RS07785at 1732.821 kb on - strand, within ABZR86_RS07785at 1732.821 kb on - strand, within ABZR86_RS07785at 1732.821 kb on - strand, within ABZR86_RS07785at 1732.821 kb on - strand, within ABZR86_RS07785at 1732.871 kb on + strand, within ABZR86_RS07785at 1732.871 kb on + strand, within ABZR86_RS07785at 1732.871 kb on + strand, within ABZR86_RS07785at 1732.872 kb on - strand, within ABZR86_RS07785at 1732.872 kb on - strand, within ABZR86_RS07785at 1732.872 kb on - strand, within ABZR86_RS07785at 1732.872 kb on - strand, within ABZR86_RS07785at 1732.872 kb on - strand, within ABZR86_RS07785

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Per-strain Table

Position Strand Gene LocusTag Fraction Chlorite 0.32 mM
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1,729,743 + ABZR86_RS07770 0.35 -0.3
1,729,744 - ABZR86_RS07770 0.35 -0.5
1,729,857 + ABZR86_RS07770 0.58 -0.4
1,729,858 - ABZR86_RS07770 0.58 +0.3
1,729,858 - ABZR86_RS07770 0.58 -0.4
1,729,858 - ABZR86_RS07770 0.58 +1.1
1,729,858 - ABZR86_RS07770 0.58 -0.1
1,729,858 - ABZR86_RS07770 0.58 -0.1
1,730,446 + ABZR86_RS07775 0.73 -0.1
1,730,447 - ABZR86_RS07775 0.73 -0.5
1,730,447 - ABZR86_RS07775 0.73 +0.0
1,730,447 - ABZR86_RS07775 0.73 +0.4
1,730,458 + ABZR86_RS07775 0.76 +1.5
1,730,458 + ABZR86_RS07775 0.76 -0.2
1,730,459 - ABZR86_RS07775 0.76 -0.6
1,730,459 - ABZR86_RS07775 0.76 +0.5
1,730,567 + -0.8
1,730,567 + +1.1
1,730,568 - -0.1
1,730,568 - -0.0
1,730,568 - -0.0
1,730,568 - -1.2
1,730,576 + -1.9
1,730,576 + +0.1
1,730,576 + -0.7
1,730,576 + -0.0
1,730,776 + ABZR86_RS07780 0.12 -0.3
1,730,776 + ABZR86_RS07780 0.12 +0.1
1,730,776 + ABZR86_RS07780 0.12 +0.5
1,730,777 - ABZR86_RS07780 0.12 +0.4
1,730,777 - ABZR86_RS07780 0.12 -0.3
1,730,777 - ABZR86_RS07780 0.12 -0.4
1,730,777 - ABZR86_RS07780 0.12 +0.0
1,730,881 + ABZR86_RS07780 0.20 -0.3
1,730,881 + ABZR86_RS07780 0.20 -0.3
1,730,881 + ABZR86_RS07780 0.20 -0.2
1,730,881 + ABZR86_RS07780 0.20 +0.2
1,730,882 - ABZR86_RS07780 0.20 -0.4
1,730,882 - ABZR86_RS07780 0.20 +0.7
1,730,882 - ABZR86_RS07780 0.20 +0.2
1,730,882 - ABZR86_RS07780 0.20 -0.4
1,731,097 + ABZR86_RS07780 0.37 +0.7
1,731,098 - ABZR86_RS07780 0.37 -0.1
1,731,121 + ABZR86_RS07780 0.39 -0.1
1,731,121 + ABZR86_RS07780 0.39 +0.2
1,731,122 - ABZR86_RS07780 0.39 -0.9
1,731,214 + ABZR86_RS07780 0.46 +0.1
1,731,214 + ABZR86_RS07780 0.46 +0.2
1,731,214 + ABZR86_RS07780 0.46 -0.6
1,731,214 + ABZR86_RS07780 0.46 -0.3
1,731,214 + ABZR86_RS07780 0.46 +1.3
1,731,215 - ABZR86_RS07780 0.46 +0.3
1,731,215 - ABZR86_RS07780 0.46 +0.3
1,731,215 - ABZR86_RS07780 0.46 +0.2
1,731,537 + ABZR86_RS07780 0.72 -0.3
1,731,537 + ABZR86_RS07780 0.72 -0.2
1,731,537 + ABZR86_RS07780 0.72 +0.0
1,731,537 + ABZR86_RS07780 0.72 +0.3
1,731,537 + ABZR86_RS07780 0.72 +0.2
1,731,538 - ABZR86_RS07780 0.72 +1.0
1,731,538 - ABZR86_RS07780 0.72 -0.6
1,731,538 - ABZR86_RS07780 0.72 -2.4
1,731,538 - ABZR86_RS07780 0.72 +0.7
1,731,652 + ABZR86_RS07780 0.81 +0.3
1,731,653 - ABZR86_RS07780 0.81 +0.6
1,731,653 - ABZR86_RS07780 0.81 +0.6
1,731,653 - ABZR86_RS07780 0.81 +0.4
1,731,653 - ABZR86_RS07780 0.81 -1.1
1,731,653 - ABZR86_RS07780 0.81 +0.4
1,731,653 - ABZR86_RS07780 0.81 -1.1
1,731,805 + -0.0
1,731,806 - -0.5
1,731,806 - -0.3
1,731,914 - +0.2
1,732,016 + -0.4
1,732,016 + -0.8
1,732,016 + -0.5
1,732,016 + +0.9
1,732,017 - +0.3
1,732,017 - -0.5
1,732,160 + ABZR86_RS07785 0.12 +0.1
1,732,160 + ABZR86_RS07785 0.12 -0.8
1,732,160 + ABZR86_RS07785 0.12 +0.1
1,732,160 + ABZR86_RS07785 0.12 +0.1
1,732,160 + ABZR86_RS07785 0.12 -0.0
1,732,160 + ABZR86_RS07785 0.12 -0.1
1,732,161 - ABZR86_RS07785 0.12 -0.1
1,732,161 - ABZR86_RS07785 0.12 -0.3
1,732,161 - ABZR86_RS07785 0.12 -1.3
1,732,202 + ABZR86_RS07785 0.15 +0.8
1,732,202 + ABZR86_RS07785 0.15 +0.7
1,732,202 + ABZR86_RS07785 0.15 -0.0
1,732,202 + ABZR86_RS07785 0.15 +0.3
1,732,203 - ABZR86_RS07785 0.15 +0.1
1,732,203 - ABZR86_RS07785 0.15 +0.9
1,732,205 + ABZR86_RS07785 0.15 +1.3
1,732,205 + ABZR86_RS07785 0.15 -0.2
1,732,218 - ABZR86_RS07785 0.16 +0.7
1,732,218 - ABZR86_RS07785 0.16 +0.8
1,732,324 + ABZR86_RS07785 0.25 -0.3
1,732,463 + ABZR86_RS07785 0.36 -1.0
1,732,541 + ABZR86_RS07785 0.42 +0.0
1,732,541 + ABZR86_RS07785 0.42 +0.1
1,732,541 + ABZR86_RS07785 0.42 +0.3
1,732,542 - ABZR86_RS07785 0.42 -0.4
1,732,542 - ABZR86_RS07785 0.42 +0.4
1,732,542 - ABZR86_RS07785 0.42 -0.3
1,732,542 - ABZR86_RS07785 0.42 -0.5
1,732,820 + ABZR86_RS07785 0.64 -0.1
1,732,820 + ABZR86_RS07785 0.64 -1.0
1,732,820 + ABZR86_RS07785 0.64 +0.1
1,732,820 + ABZR86_RS07785 0.64 +0.5
1,732,820 + ABZR86_RS07785 0.64 -1.0
1,732,821 - ABZR86_RS07785 0.64 -1.2
1,732,821 - ABZR86_RS07785 0.64 -0.6
1,732,821 - ABZR86_RS07785 0.64 -0.2
1,732,821 - ABZR86_RS07785 0.64 +0.3
1,732,821 - ABZR86_RS07785 0.64 +0.4
1,732,821 - ABZR86_RS07785 0.64 -0.5
1,732,871 + ABZR86_RS07785 0.68 -0.2
1,732,871 + ABZR86_RS07785 0.68 -0.3
1,732,871 + ABZR86_RS07785 0.68 -0.0
1,732,872 - ABZR86_RS07785 0.68 +3.6
1,732,872 - ABZR86_RS07785 0.68 +0.1
1,732,872 - ABZR86_RS07785 0.68 +0.9
1,732,872 - ABZR86_RS07785 0.68 -0.1
1,732,872 - ABZR86_RS07785 0.68 -0.4

Or see this region's nucleotide sequence