Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS18360

Experiment: Nalidixic 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.08 mg/ml
92,152	+		ABZR86_RS18350	0.45	+0.7
92,153	-		ABZR86_RS18350	0.45	+2.6
92,153	-		ABZR86_RS18350	0.45	+0.6
92,153	-		ABZR86_RS18350	0.45	-0.3
92,281	+		ABZR86_RS18350	0.58	-0.3
92,282	-		ABZR86_RS18350	0.58	+0.0
92,282	-		ABZR86_RS18350	0.58	-0.3
92,293	+		ABZR86_RS18350	0.59	+0.2
92,293	+		ABZR86_RS18350	0.59	+1.0
92,413	+		ABZR86_RS18350	0.71	+0.8
92,413	+		ABZR86_RS18350	0.71	+0.7
92,425	+		ABZR86_RS18350	0.73	-0.2
92,426	-		ABZR86_RS18350	0.73	+0.6
92,426	-		ABZR86_RS18350	0.73	-0.1
92,426	-		ABZR86_RS18350	0.73	+0.6
92,426	-		ABZR86_RS18350	0.73	+0.5
92,455	+		ABZR86_RS18350	0.76	+0.1
92,507	-		ABZR86_RS18350	0.81	+1.1
92,507	-		ABZR86_RS18350	0.81	-0.5
92,507	-		ABZR86_RS18350	0.81	+0.6
92,573	-		ABZR86_RS18350	0.88	+0.1
92,573	-		ABZR86_RS18350	0.88	+0.5
92,684	+				-2.0
92,685	-				+1.2
92,717	+				+0.8
92,717	+				-0.5
92,717	+				-0.4
92,717	+				-0.2
92,717	+				-0.5
92,718	-				+0.3
92,736	-				+1.9
92,781	+				-0.7
92,781	+				+0.5
92,929	-		ABZR86_RS18355	0.47	-0.3
93,081	+				-0.5
93,112	+				-1.1
93,208	-		ABZR86_RS18360	0.16	-0.5
93,387	+		ABZR86_RS18360	0.42	-0.3
93,387	+		ABZR86_RS18360	0.42	-1.5
93,387	+		ABZR86_RS18360	0.42	-1.2
93,552	+		ABZR86_RS18360	0.66	-0.0
93,552	+		ABZR86_RS18360	0.66	-0.5
93,552	+		ABZR86_RS18360	0.66	-2.1
93,552	+		ABZR86_RS18360	0.66	-0.8
93,553	-		ABZR86_RS18360	0.66	-1.0
93,558	+		ABZR86_RS18360	0.67	-1.1
93,558	+		ABZR86_RS18360	0.67	-0.8
93,558	+		ABZR86_RS18360	0.67	-2.4
93,558	+		ABZR86_RS18360	0.67	-0.9
93,558	+		ABZR86_RS18360	0.67	+0.2
93,558	+		ABZR86_RS18360	0.67	+1.2
93,558	+		ABZR86_RS18360	0.67	-1.4
93,558	+		ABZR86_RS18360	0.67	-0.5
93,558	+		ABZR86_RS18360	0.67	-0.3
93,558	+		ABZR86_RS18360	0.67	-1.1
93,558	+		ABZR86_RS18360	0.67	-1.6
93,559	-		ABZR86_RS18360	0.67	-1.8
93,559	-		ABZR86_RS18360	0.67	-1.0
93,559	-		ABZR86_RS18360	0.67	-0.7
93,559	-		ABZR86_RS18360	0.67	-0.7
93,559	-		ABZR86_RS18360	0.67	-1.7
93,559	-		ABZR86_RS18360	0.67	-1.2
93,559	-		ABZR86_RS18360	0.67	-1.3
93,559	-		ABZR86_RS18360	0.67	-3.3
93,559	-		ABZR86_RS18360	0.67	-2.3
93,559	-		ABZR86_RS18360	0.67	-0.1
93,559	-		ABZR86_RS18360	0.67	-1.3
93,573	+		ABZR86_RS18360	0.69	-1.8
93,574	-		ABZR86_RS18360	0.69	-0.7
93,574	-		ABZR86_RS18360	0.69	-2.5
93,574	-		ABZR86_RS18360	0.69	+0.2
93,574	-		ABZR86_RS18360	0.69	-0.7
93,630	+		ABZR86_RS18360	0.77	-0.7
93,630	+		ABZR86_RS18360	0.77	-0.1
93,630	+		ABZR86_RS18360	0.77	-2.6
93,630	+		ABZR86_RS18360	0.77	-1.8
93,631	-		ABZR86_RS18360	0.77	-1.4
93,631	-		ABZR86_RS18360	0.77	-0.2
93,631	-		ABZR86_RS18360	0.77	-0.6
93,631	-		ABZR86_RS18360	0.77	-3.0
93,733	+				-1.7
93,733	+				-1.3
93,734	-				-1.8
93,879	+				-0.8
93,879	+				-1.3
93,879	+				-2.3
93,879	+				-1.0
93,879	+				-1.4
93,879	+				-2.6
93,879	+				+1.3
93,879	+				-0.4
93,880	-				-1.2
93,880	-				-1.4
93,880	-				-0.5
93,880	-				-1.1
93,880	-				-0.5
93,880	-				-0.4
93,880	-				+0.3
93,880	-				-1.3
93,880	-				-0.0
93,880	-				+0.0
93,940	+		ABZR86_RS18365	0.13	-0.4
93,940	+		ABZR86_RS18365	0.13	+0.7
93,940	+		ABZR86_RS18365	0.13	-1.5
93,940	+		ABZR86_RS18365	0.13	-1.4
93,940	+		ABZR86_RS18365	0.13	+0.2
93,940	+		ABZR86_RS18365	0.13	-2.1
93,940	+		ABZR86_RS18365	0.13	-1.3
93,940	+		ABZR86_RS18365	0.13	+0.2
93,941	-		ABZR86_RS18365	0.13	-3.6
93,941	-		ABZR86_RS18365	0.13	-1.6
93,941	-		ABZR86_RS18365	0.13	-0.5
93,941	-		ABZR86_RS18365	0.13	-0.4
93,941	-		ABZR86_RS18365	0.13	-1.3
93,941	-		ABZR86_RS18365	0.13	-2.9
93,941	-		ABZR86_RS18365	0.13	-1.2
93,941	-		ABZR86_RS18365	0.13	-0.6
93,953	-		ABZR86_RS18365	0.14	-0.0
94,045	+		ABZR86_RS18365	0.21	-0.6
94,045	+		ABZR86_RS18365	0.21	-1.3
94,046	-		ABZR86_RS18365	0.21	-1.3
94,046	-		ABZR86_RS18365	0.21	-1.8
94,046	-		ABZR86_RS18365	0.21	-0.1
94,046	-		ABZR86_RS18365	0.21	-0.5
94,046	-		ABZR86_RS18365	0.21	-0.4
94,183	+		ABZR86_RS18365	0.30	+0.1
94,183	+		ABZR86_RS18365	0.30	-1.8
94,183	+		ABZR86_RS18365	0.30	-1.2
94,183	+		ABZR86_RS18365	0.30	+0.1
94,183	+		ABZR86_RS18365	0.30	-0.9
94,184	-		ABZR86_RS18365	0.30	-0.7
94,184	-		ABZR86_RS18365	0.30	-0.5
94,184	-		ABZR86_RS18365	0.30	-1.6
94,184	-		ABZR86_RS18365	0.30	-2.6
94,186	+		ABZR86_RS18365	0.31	-0.7
94,186	+		ABZR86_RS18365	0.31	-0.7
94,186	+		ABZR86_RS18365	0.31	-0.3
94,186	+		ABZR86_RS18365	0.31	-0.7
94,187	-		ABZR86_RS18365	0.31	-0.7
94,187	-		ABZR86_RS18365	0.31	-0.9
94,187	-		ABZR86_RS18365	0.31	-0.9
94,187	-		ABZR86_RS18365	0.31	-2.0
94,189	+		ABZR86_RS18365	0.31	-0.1
94,189	+		ABZR86_RS18365	0.31	-0.0
94,189	+		ABZR86_RS18365	0.31	-2.3
94,189	+		ABZR86_RS18365	0.31	+0.1
94,189	+		ABZR86_RS18365	0.31	-1.3
94,189	+		ABZR86_RS18365	0.31	-1.4
94,189	+		ABZR86_RS18365	0.31	-0.4
94,189	+		ABZR86_RS18365	0.31	-0.9
94,189	+		ABZR86_RS18365	0.31	-2.5
94,189	+		ABZR86_RS18365	0.31	-1.3
94,190	-		ABZR86_RS18365	0.31	-2.0
94,190	-		ABZR86_RS18365	0.31	-0.8
94,190	-		ABZR86_RS18365	0.31	-0.8
94,190	-		ABZR86_RS18365	0.31	-1.8
94,190	-		ABZR86_RS18365	0.31	-0.3
94,190	-		ABZR86_RS18365	0.31	-1.4
94,190	-		ABZR86_RS18365	0.31	-0.1
94,190	-		ABZR86_RS18365	0.31	-0.8
94,190	-		ABZR86_RS18365	0.31	-1.1
94,190	-		ABZR86_RS18365	0.31	-0.9
94,195	+		ABZR86_RS18365	0.31	-1.1
94,195	+		ABZR86_RS18365	0.31	-1.6
94,195	+		ABZR86_RS18365	0.31	-0.1
94,195	+		ABZR86_RS18365	0.31	-0.2
94,196	-		ABZR86_RS18365	0.31	-0.2
94,196	-		ABZR86_RS18365	0.31	-1.9
94,196	-		ABZR86_RS18365	0.31	-0.9
94,196	-		ABZR86_RS18365	0.31	-1.6
94,196	-		ABZR86_RS18365	0.31	+1.5
94,669	+		ABZR86_RS18365	0.65	+0.1
94,670	-		ABZR86_RS18365	0.65	-0.6
94,670	-		ABZR86_RS18365	0.65	-1.3
94,771	+		ABZR86_RS18365	0.72	-0.8
94,771	+		ABZR86_RS18365	0.72	-1.5
94,771	+		ABZR86_RS18365	0.72	-0.7
94,771	+		ABZR86_RS18365	0.72	-1.4
94,771	+		ABZR86_RS18365	0.72	-1.4
94,771	+		ABZR86_RS18365	0.72	-1.4
94,772	-		ABZR86_RS18365	0.72	-0.8
94,772	-		ABZR86_RS18365	0.72	-0.9
94,772	-		ABZR86_RS18365	0.72	-0.3
94,772	-		ABZR86_RS18365	0.72	-0.5