Experiment: Paraquat dichloride 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21127 and SM_b21128 are separated by 6 nucleotides SM_b21128 and SM_b21129 are separated by 135 nucleotides SM_b21129 and SM_b21130 are separated by 152 nucleotides
SM_b21127: SM_b21127 - hypothetical protein, at 766,495 to 766,866
_b21127
SM_b21128: SM_b21128 - hypothetical protein, at 766,873 to 767,427
_b21128
SM_b21129: SM_b21129 - oxidoreductase, at 767,563 to 768,891
_b21129
SM_b21130: SM_b21130 - sulfate ABC transporter ATP-binding protein, at 769,044 to 770,147
_b21130
Position (kb) 767
768
769 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 766.864 kb on + strand at 766.864 kb on + strand at 766.865 kb on - strand at 766.865 kb on - strand at 766.974 kb on + strand, within SM_b21128 at 766.974 kb on + strand, within SM_b21128 at 766.974 kb on + strand, within SM_b21128 at 766.974 kb on + strand, within SM_b21128 at 766.974 kb on + strand, within SM_b21128 at 766.975 kb on - strand, within SM_b21128 at 766.975 kb on - strand, within SM_b21128 at 766.975 kb on - strand, within SM_b21128 at 766.975 kb on - strand, within SM_b21128 at 767.081 kb on - strand, within SM_b21128 at 767.082 kb on + strand, within SM_b21128 at 767.083 kb on - strand, within SM_b21128 at 767.083 kb on - strand, within SM_b21128 at 767.284 kb on + strand, within SM_b21128 at 767.285 kb on - strand, within SM_b21128 at 767.285 kb on - strand, within SM_b21128 at 767.285 kb on - strand, within SM_b21128 at 767.299 kb on + strand, within SM_b21128 at 767.299 kb on + strand, within SM_b21128 at 767.299 kb on + strand, within SM_b21128 at 767.300 kb on - strand, within SM_b21128 at 767.453 kb on + strand at 767.492 kb on + strand at 767.493 kb on - strand at 767.540 kb on - strand at 767.722 kb on - strand, within SM_b21129 at 767.723 kb on + strand, within SM_b21129 at 767.724 kb on - strand, within SM_b21129 at 767.724 kb on - strand, within SM_b21129 at 767.724 kb on - strand, within SM_b21129 at 768.176 kb on + strand, within SM_b21129 at 768.176 kb on + strand, within SM_b21129 at 768.176 kb on + strand, within SM_b21129 at 768.176 kb on + strand, within SM_b21129 at 768.176 kb on + strand, within SM_b21129 at 768.176 kb on + strand, within SM_b21129 at 768.177 kb on - strand, within SM_b21129 at 768.177 kb on - strand, within SM_b21129 at 768.177 kb on - strand, within SM_b21129 at 768.177 kb on - strand, within SM_b21129 at 768.197 kb on + strand, within SM_b21129 at 768.198 kb on - strand, within SM_b21129 at 768.257 kb on + strand, within SM_b21129 at 768.257 kb on + strand, within SM_b21129 at 768.257 kb on + strand, within SM_b21129 at 768.258 kb on - strand, within SM_b21129 at 768.377 kb on + strand, within SM_b21129 at 768.377 kb on + strand, within SM_b21129 at 768.548 kb on - strand, within SM_b21129 at 768.631 kb on - strand, within SM_b21129 at 769.120 kb on - strand at 769.211 kb on + strand, within SM_b21130 at 769.211 kb on + strand, within SM_b21130 at 769.212 kb on - strand, within SM_b21130 at 769.212 kb on - strand, within SM_b21130 at 769.212 kb on - strand, within SM_b21130 at 769.212 kb on - strand, within SM_b21130 at 769.327 kb on + strand, within SM_b21130 at 769.474 kb on + strand, within SM_b21130 at 769.474 kb on + strand, within SM_b21130 at 769.474 kb on + strand, within SM_b21130 at 769.474 kb on + strand, within SM_b21130 at 769.474 kb on + strand, within SM_b21130 at 769.475 kb on - strand, within SM_b21130 at 769.475 kb on - strand, within SM_b21130
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.2 mg/ml remove 766,864 + -1.4 766,864 + -0.6 766,865 - -1.1 766,865 - -1.4 766,974 + SM_b21128 0.18 +0.3 766,974 + SM_b21128 0.18 +1.0 766,974 + SM_b21128 0.18 -0.1 766,974 + SM_b21128 0.18 +1.5 766,974 + SM_b21128 0.18 -1.1 766,975 - SM_b21128 0.18 -1.1 766,975 - SM_b21128 0.18 +0.2 766,975 - SM_b21128 0.18 -0.7 766,975 - SM_b21128 0.18 -2.4 767,081 - SM_b21128 0.37 -0.7 767,082 + SM_b21128 0.38 -0.4 767,083 - SM_b21128 0.38 +0.2 767,083 - SM_b21128 0.38 -0.5 767,284 + SM_b21128 0.74 -0.8 767,285 - SM_b21128 0.74 -0.5 767,285 - SM_b21128 0.74 -0.2 767,285 - SM_b21128 0.74 -0.3 767,299 + SM_b21128 0.77 -2.9 767,299 + SM_b21128 0.77 -2.0 767,299 + SM_b21128 0.77 +2.6 767,300 - SM_b21128 0.77 -2.9 767,453 + -0.3 767,492 + +1.0 767,493 - -0.3 767,540 - +0.8 767,722 - SM_b21129 0.12 -2.2 767,723 + SM_b21129 0.12 -1.7 767,724 - SM_b21129 0.12 -3.1 767,724 - SM_b21129 0.12 -0.5 767,724 - SM_b21129 0.12 -0.6 768,176 + SM_b21129 0.46 +0.1 768,176 + SM_b21129 0.46 -0.0 768,176 + SM_b21129 0.46 -0.1 768,176 + SM_b21129 0.46 -2.2 768,176 + SM_b21129 0.46 -0.0 768,176 + SM_b21129 0.46 -1.4 768,177 - SM_b21129 0.46 -0.2 768,177 - SM_b21129 0.46 -0.6 768,177 - SM_b21129 0.46 -0.6 768,177 - SM_b21129 0.46 +0.1 768,197 + SM_b21129 0.48 -0.7 768,198 - SM_b21129 0.48 +1.6 768,257 + SM_b21129 0.52 +0.3 768,257 + SM_b21129 0.52 +0.8 768,257 + SM_b21129 0.52 +1.5 768,258 - SM_b21129 0.52 -1.4 768,377 + SM_b21129 0.61 -0.0 768,377 + SM_b21129 0.61 +0.7 768,548 - SM_b21129 0.74 -0.8 768,631 - SM_b21129 0.80 +1.0 769,120 - -0.2 769,211 + SM_b21130 0.15 -0.1 769,211 + SM_b21130 0.15 +0.2 769,212 - SM_b21130 0.15 +0.6 769,212 - SM_b21130 0.15 +0.9 769,212 - SM_b21130 0.15 +0.2 769,212 - SM_b21130 0.15 +0.2 769,327 + SM_b21130 0.26 +0.2 769,474 + SM_b21130 0.39 +0.0 769,474 + SM_b21130 0.39 -0.3 769,474 + SM_b21130 0.39 +0.6 769,474 + SM_b21130 0.39 +1.0 769,474 + SM_b21130 0.39 -1.0 769,475 - SM_b21130 0.39 +0.4 769,475 - SM_b21130 0.39 -1.5
Or see this region's nucleotide sequence