Strain Fitness in Pseudomonas simiae WCS417 around PS417_26020

Experiment: Nalidixic 0.015 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.015 mg/ml
5,620,438	-				+0.0
5,620,438	-				+0.2
5,620,524	+				-0.1
5,620,525	-				-0.0
5,620,617	+		PS417_26015	0.11	+0.8
5,620,617	+		PS417_26015	0.11	-0.1
5,620,618	-		PS417_26015	0.11	-0.2
5,620,618	-		PS417_26015	0.11	-0.5
5,620,618	-		PS417_26015	0.11	-0.0
5,620,652	-		PS417_26015	0.16	+0.1
5,620,652	-		PS417_26015	0.16	-1.1
5,620,799	+		PS417_26015	0.35	-0.1
5,620,799	+		PS417_26015	0.35	+1.1
5,620,800	-		PS417_26015	0.35	+0.1
5,621,007	-		PS417_26015	0.62	-0.7
5,621,081	+		PS417_26015	0.72	-1.3
5,621,186	+		PS417_26015	0.86	-0.3
5,621,187	-		PS417_26015	0.86	-0.8
5,621,238	+				-0.1
5,621,305	+				-0.4
5,621,309	+				-0.3
5,621,309	+				+0.2
5,621,310	-				-1.7
5,621,381	+				-0.5
5,621,384	+				+0.5
5,621,384	+				-0.3
5,621,385	-				-0.2
5,621,583	+		PS417_26020	0.11	-1.2
5,621,583	+		PS417_26020	0.11	+0.3
5,621,584	-		PS417_26020	0.11	-0.8
5,621,600	-		PS417_26020	0.12	+0.2
5,621,791	+		PS417_26020	0.22	+0.5
5,621,792	-		PS417_26020	0.22	-1.1
5,621,792	-		PS417_26020	0.22	-0.5
5,621,792	-		PS417_26020	0.22	-0.9
5,621,798	-		PS417_26020	0.22	-0.4
5,621,883	-		PS417_26020	0.27	+0.5
5,621,926	+		PS417_26020	0.29	+0.5
5,622,018	+		PS417_26020	0.34	-1.3
5,622,076	+		PS417_26020	0.37	+0.1
5,622,076	+		PS417_26020	0.37	-0.5
5,622,076	+		PS417_26020	0.37	-0.1
5,622,077	-		PS417_26020	0.37	-0.5
5,622,077	-		PS417_26020	0.37	-0.5
5,622,157	+		PS417_26020	0.41	-0.1
5,622,158	-		PS417_26020	0.41	-0.3
5,622,373	+		PS417_26020	0.53	-0.1
5,622,373	+		PS417_26020	0.53	+0.7
5,622,373	+		PS417_26020	0.53	-0.9
5,622,374	-		PS417_26020	0.53	+0.6
5,622,406	+		PS417_26020	0.54	+0.2
5,622,407	-		PS417_26020	0.54	-0.4
5,622,484	+		PS417_26020	0.58	-0.2
5,622,484	+		PS417_26020	0.58	-0.8
5,622,484	+		PS417_26020	0.58	+0.7
5,622,484	+		PS417_26020	0.58	+0.7
5,622,485	-		PS417_26020	0.59	-0.1
5,622,485	-		PS417_26020	0.59	+0.3
5,622,485	-		PS417_26020	0.59	+0.6
5,623,000	+		PS417_26020	0.86	+0.1
5,623,119	+				+0.0
5,623,119	+				+1.1
5,623,119	+				-0.0
5,623,152	-				+0.0
5,623,273	+				-0.0
5,623,274	-				-0.4
5,623,274	-				+0.1
5,623,274	-				+0.3
5,623,335	+				+0.5
5,623,336	-				+0.3
5,623,344	+				-0.5
5,623,344	+				-1.3
5,623,344	+				-0.1
5,623,344	+				-0.5
5,623,345	-				-0.2
5,623,345	-				+0.0
5,623,345	-				-0.4
5,623,345	-				-0.4
5,623,356	+				+0.7
5,623,401	+				-1.4
5,623,401	+				-0.6
5,623,401	+				-0.1
5,623,401	+				+0.1
5,623,402	-				+0.2
5,623,402	-				+0.0
5,623,402	-				-1.0
5,623,402	-				+0.2
5,623,402	-				-0.0
5,623,402	-				-0.0
5,623,405	+				-1.3
5,623,405	+				+0.3
5,623,405	+				+0.2
5,623,405	+				-0.4
5,623,405	+				+0.1
5,623,405	+				+0.2
5,623,406	-				+0.4
5,623,406	-				-0.6
5,623,406	-				-0.8
5,623,406	-				+0.5
5,623,406	-				-0.7
5,623,566	+		PS417_26025	0.10	-0.1
5,623,582	-		PS417_26025	0.12	-0.3
5,623,626	+		PS417_26025	0.16	+0.1
5,623,627	-		PS417_26025	0.16	-0.0
5,623,676	+		PS417_26025	0.21	-0.3
5,623,825	-				+1.1
5,623,978	-		PS417_26025	0.52	+0.7
5,624,022	+		PS417_26025	0.57	-0.1
5,624,022	+		PS417_26025	0.57	-0.2
5,624,022	+		PS417_26025	0.57	-0.3
5,624,022	+		PS417_26025	0.57	+0.0
5,624,022	+		PS417_26025	0.57	-0.3
5,624,023	-		PS417_26025	0.57	+0.1
5,624,023	-		PS417_26025	0.57	+2.4
5,624,023	-		PS417_26025	0.57	-1.2
5,624,023	-		PS417_26025	0.57	-1.0