Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3972

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
4,412,517	+		Pf1N1B4_3970	0.71	-1.1
4,412,517	+				-0.6
4,412,517	+				+0.7
4,412,517	+		Pf1N1B4_3970	0.71	-0.6
4,412,517	+		Pf1N1B4_3970	0.71	+0.7
4,412,517	+		Pf1N1B4_3970	0.71	+0.1
4,412,518	-		Pf1N1B4_3970	0.71	+3.3
4,412,518	-		Pf1N1B4_3970	0.71	+0.7
4,412,518	-		Pf1N1B4_3970	0.71	+0.7
4,412,742	+		Pf1N1B4_3970	0.88	-0.8
4,412,742	+		Pf1N1B4_3970	0.88	-0.0
4,412,742	+		Pf1N1B4_3970	0.88	+1.1
4,412,742	+		Pf1N1B4_3970	0.88	-0.9
4,412,743	-		Pf1N1B4_3970	0.88	+0.7
4,412,787	+				+0.4
4,412,787	+				-0.5
4,412,908	+				+0.7
4,412,919	+				-0.9
4,412,919	+				-1.0
4,412,919	+				+0.3
4,412,919	+				-0.0
4,412,919	+				+2.0
4,412,919	+				+0.8
4,412,919	+				-2.3
4,412,919	+				-1.6
4,412,919	+				+0.1
4,412,919	+				+1.7
4,412,920	-				+0.1
4,412,920	-				+0.3
4,412,920	-				-0.3
4,412,920	-				+0.7
4,412,920	-				-1.8
4,412,920	-				-1.0
4,412,920	-				-0.1
4,412,982	+				+0.1
4,412,982	+				-0.0
4,412,982	+				-0.9
4,412,982	+				+0.1
4,412,983	-				-2.3
4,412,983	-				+0.1
4,413,066	+				-0.9
4,413,067	-				-0.2
4,413,067	-				-0.6
4,413,067	-				-0.3
4,413,067	-				+0.0
4,413,489	+		Pf1N1B4_3972	0.16	-1.9
4,413,490	-		Pf1N1B4_3972	0.16	-0.5
4,413,495	+				+1.7
4,413,495	+		Pf1N1B4_3972	0.17	-0.9
4,413,495	+				-0.3
4,413,496	-		Pf1N1B4_3972	0.17	-1.6
4,413,496	-		Pf1N1B4_3972	0.17	-2.9
4,413,727	-		Pf1N1B4_3972	0.46	-0.4
4,413,727	-		Pf1N1B4_3972	0.46	+0.1
4,414,079	+				+1.3
4,414,287	+		Pf1N1B4_3973	0.14	+0.7
4,414,287	+		Pf1N1B4_3973	0.14	-1.0
4,414,575	+				+0.3
4,414,749	+		Pf1N1B4_3973	0.67	+0.2
4,414,749	+		Pf1N1B4_3973	0.67	-0.9
4,414,749	+		Pf1N1B4_3973	0.67	-1.6
4,414,749	+		Pf1N1B4_3973	0.67	+1.1
4,414,828	-		Pf1N1B4_3973	0.76	+0.7
4,414,833	+		Pf1N1B4_3973	0.77	-1.5
4,414,834	-		Pf1N1B4_3973	0.77	+0.1
4,414,886	-				-1.6
4,414,886	-				+1.3
4,414,886	-				+1.7
4,414,963	-				-0.3
4,414,963	-				+0.7
4,414,963	-				-2.3
4,415,026	+				-0.3
4,415,026	+				-1.0
4,415,026	+				-1.5