Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3364

Experiment: Nalidixic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.004 mg/ml
3,750,983	+		Pf1N1B4_3363	0.56	-1.4
3,750,983	+		Pf1N1B4_3363	0.56	-1.3
3,751,106	+		Pf1N1B4_3363	0.63	-1.7
3,751,107	-		Pf1N1B4_3363	0.63	-0.6
3,751,205	+		Pf1N1B4_3363	0.68	-1.7
3,751,205	+		Pf1N1B4_3363	0.68	-2.1
3,751,205	+		Pf1N1B4_3363	0.68	-1.7
3,751,205	+		Pf1N1B4_3363	0.68	+1.9
3,751,205	+		Pf1N1B4_3363	0.68	-0.8
3,751,205	+		Pf1N1B4_3363	0.68	+0.9
3,751,206	-		Pf1N1B4_3363	0.68	+1.2
3,751,206	-		Pf1N1B4_3363	0.68	-1.2
3,751,206	-				+1.3
3,751,311	-		Pf1N1B4_3363	0.73	-1.8
3,751,420	+		Pf1N1B4_3363	0.79	-0.5
3,751,421	-		Pf1N1B4_3363	0.79	-0.9
3,751,535	-				+2.5
3,751,629	-		Pf1N1B4_3363	0.90	-0.5
3,751,966	+				+0.4
3,751,966	+				-2.3
3,751,967	-				-0.7
3,751,970	+				+2.5
3,751,970	+				-0.1
3,751,970	+				+1.9
3,751,971	-				-0.1
3,752,182	+		Pf1N1B4_3364	0.25	-1.9
3,752,183	-		Pf1N1B4_3364	0.26	-2.9
3,752,295	+		Pf1N1B4_3364	0.38	+0.6
3,752,295	+		Pf1N1B4_3364	0.38	-1.7
3,752,334	-		Pf1N1B4_3364	0.42	+0.9
3,752,334	-		Pf1N1B4_3364	0.42	-1.2
3,752,345	+		Pf1N1B4_3364	0.43	-1.4
3,752,882	+				+0.6
3,752,882	+				+1.2
3,752,904	+				+0.6
3,752,904	+				+1.5
3,752,984	+				-0.1
3,752,984	+				+0.1
3,752,984	+				-0.5
3,753,074	-				+0.4
3,753,102	+				-0.3
3,753,102	+				-0.1
3,753,364	+		Pf1N1B4_3365	0.27	+0.1
3,753,364	+		Pf1N1B4_3365	0.27	+0.5
3,753,364	+				-0.7
3,753,365	-		Pf1N1B4_3365	0.27	-0.4
3,753,365	-		Pf1N1B4_3365	0.27	-0.1
3,753,669	+		Pf1N1B4_3365	0.51	+1.4
3,753,669	+		Pf1N1B4_3365	0.51	-0.6
3,753,778	+		Pf1N1B4_3365	0.60	-2.3
3,753,778	+		Pf1N1B4_3365	0.60	+1.5
3,753,833	+		Pf1N1B4_3365	0.64	+0.6
3,753,834	-		Pf1N1B4_3365	0.64	+0.9