Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_80

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
81,778	-		Pf1N1B4_78	0.59	-2.4
81,778	-		Pf1N1B4_78	0.59	+0.5
81,778	-		Pf1N1B4_78	0.59	+0.1
81,778	-		Pf1N1B4_78	0.59	-0.2
81,967	+				-0.2
81,968	-				+1.4
82,022	+				+1.2
82,064	+				+0.2
82,064	+				-0.4
82,064	+				+0.8
82,065	-				+1.1
82,065	-				+0.4
82,065	-				-1.2
82,065	-				+0.8
82,065	-				+0.6
82,070	+				-0.8
82,071	-				-0.2
82,071	-				+0.4
82,071	-				+1.4
82,090	+				+0.4
82,090	+				+1.3
82,091	-				-0.2
82,091	-				-0.2
82,091	-				-0.7
82,124	+				+0.8
82,125	-				+0.8
82,324	+		Pf1N1B4_79	0.41	+0.9
82,324	+		Pf1N1B4_79	0.41	+0.0
82,325	-		Pf1N1B4_79	0.41	-1.2
82,357	+		Pf1N1B4_79	0.50	+3.1
82,358	-		Pf1N1B4_79	0.50	-1.0
82,358	-		Pf1N1B4_79	0.50	-0.1
82,358	-		Pf1N1B4_79	0.50	+0.4
82,358	-		Pf1N1B4_79	0.50	-0.5
82,358	-		Pf1N1B4_79	0.50	+0.2
82,492	+		Pf1N1B4_79	0.86	+0.8
82,526	+				-1.8
82,526	+				-0.6
82,526	+				+0.4
82,527	-				+0.0
82,527	-				+0.2
82,527	-				-1.5
82,527	-				-0.2
82,540	+				+0.6
82,564	+				-0.8
82,564	+				+0.8
82,564	+				+0.5
82,565	-				+0.5
82,565	-				+0.9
82,688	+				-0.6
82,688	+				-2.0
82,689	-				+0.0
82,719	-		Pf1N1B4_80	0.12	+0.6
82,744	+		Pf1N1B4_80	0.14	+0.2
82,744	+		Pf1N1B4_80	0.14	+0.2
82,745	-		Pf1N1B4_80	0.14	+1.8
83,040	+		Pf1N1B4_80	0.37	-0.6
83,041	-		Pf1N1B4_80	0.37	+0.8
83,165	+		Pf1N1B4_80	0.47	+1.0
83,166	-		Pf1N1B4_80	0.47	+0.8
83,364	+		Pf1N1B4_80	0.63	+0.8
83,364	+				+0.2
83,365	-		Pf1N1B4_80	0.63	+0.7
83,365	-		Pf1N1B4_80	0.63	+1.0
83,366	+		Pf1N1B4_80	0.63	-0.2
83,423	-		Pf1N1B4_80	0.67	+0.8
83,423	-		Pf1N1B4_80	0.67	+0.5
83,450	+		Pf1N1B4_80	0.69	-0.8
83,544	+		Pf1N1B4_80	0.77	+0.6
83,545	-		Pf1N1B4_80	0.77	+1.0
83,717	+				-0.6
83,717	+				-2.7
83,718	-				-0.3
83,840	-				-0.7
83,894	-				-0.8
83,905	+				-0.2
83,950	+				+0.4
83,999	+				-1.0
83,999	+				+1.0
83,999	+				-0.5
83,999	+				-2.2
84,000	-				-0.2
84,000	-				+0.8
84,000	-				+0.8
84,000	-				-0.4
84,000	-				+0.4
84,000	-				-0.8
84,000	-				-0.8
84,000	-				+1.8
84,000	-				-0.9
84,000	-				+0.8
84,000	-				+0.4
84,000	-				-1.0
84,000	-				-1.2
84,000	-				-0.6
84,000	-				+0.9
84,000	-				-0.5
84,001	+				+0.5
84,001	+				+0.2
84,030	-				+2.2
84,110	+		Pf1N1B4_81	0.12	+1.8
84,140	+		Pf1N1B4_81	0.16	+1.1
84,163	-		Pf1N1B4_81	0.19	+0.8
84,383	+		Pf1N1B4_81	0.47	-0.2
84,460	+		Pf1N1B4_81	0.57	+0.4
84,647	+		Pf1N1B4_81	0.81	+0.8