Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_672 and Pf1N1B4_673 overlap by 4 nucleotides Pf1N1B4_673 and Pf1N1B4_674 are separated by 208 nucleotides
Pf1N1B4_672 - FIG00955538: hypothetical protein, at 768,573 to 769,736
_672
Pf1N1B4_673 - MoxR-like ATPases, at 769,733 to 770,734
_673
Pf1N1B4_674 - POSSIBLE CONSERVED MEMBRANE PROTEIN, at 770,943 to 772,274
_674
Position (kb) 769
770
771 Strain fitness (log2 ratio) -2
-1
0
1
2 at 769.051 kb on - strand, within Pf1N1B4_672 at 769.051 kb on - strand, within Pf1N1B4_672 at 769.077 kb on + strand, within Pf1N1B4_672 at 769.078 kb on - strand, within Pf1N1B4_672 at 769.078 kb on - strand, within Pf1N1B4_672 at 769.243 kb on - strand, within Pf1N1B4_672 at 769.267 kb on - strand, within Pf1N1B4_672 at 769.305 kb on - strand, within Pf1N1B4_672 at 769.732 kb on + strand at 770.031 kb on - strand, within Pf1N1B4_673 at 770.077 kb on + strand, within Pf1N1B4_673 at 770.078 kb on - strand, within Pf1N1B4_673 at 770.078 kb on - strand, within Pf1N1B4_673 at 770.246 kb on + strand, within Pf1N1B4_673 at 770.247 kb on - strand, within Pf1N1B4_673 at 770.466 kb on - strand, within Pf1N1B4_673 at 770.548 kb on - strand, within Pf1N1B4_673 at 770.548 kb on - strand, within Pf1N1B4_673 at 770.817 kb on - strand at 770.846 kb on + strand at 770.895 kb on - strand at 770.895 kb on - strand at 771.146 kb on + strand, within Pf1N1B4_674 at 771.147 kb on - strand at 771.147 kb on - strand, within Pf1N1B4_674 at 771.147 kb on - strand, within Pf1N1B4_674 at 771.147 kb on - strand, within Pf1N1B4_674 at 771.185 kb on - strand, within Pf1N1B4_674 at 771.227 kb on - strand, within Pf1N1B4_674 at 771.227 kb on - strand, within Pf1N1B4_674 at 771.227 kb on - strand, within Pf1N1B4_674 at 771.227 kb on - strand, within Pf1N1B4_674 at 771.227 kb on - strand, within Pf1N1B4_674 at 771.227 kb on - strand, within Pf1N1B4_674 at 771.227 kb on - strand, within Pf1N1B4_674 at 771.394 kb on + strand, within Pf1N1B4_674 at 771.395 kb on - strand, within Pf1N1B4_674 at 771.421 kb on + strand at 771.421 kb on + strand, within Pf1N1B4_674 at 771.422 kb on - strand, within Pf1N1B4_674 at 771.422 kb on - strand, within Pf1N1B4_674 at 771.462 kb on + strand, within Pf1N1B4_674 at 771.462 kb on + strand at 771.639 kb on + strand, within Pf1N1B4_674 at 771.639 kb on + strand, within Pf1N1B4_674 at 771.639 kb on + strand at 771.640 kb on - strand, within Pf1N1B4_674 at 771.640 kb on - strand, within Pf1N1B4_674
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 769,051 - Pf1N1B4_672 0.41 +1.0 769,051 - Pf1N1B4_672 0.41 +1.0 769,077 + Pf1N1B4_672 0.43 +1.0 769,078 - Pf1N1B4_672 0.43 +0.2 769,078 - Pf1N1B4_672 0.43 +0.7 769,243 - Pf1N1B4_672 0.58 +1.3 769,267 - Pf1N1B4_672 0.60 +1.4 769,305 - Pf1N1B4_672 0.63 -0.8 769,732 + -2.2 770,031 - Pf1N1B4_673 0.30 +0.7 770,077 + Pf1N1B4_673 0.34 -1.2 770,078 - Pf1N1B4_673 0.34 -0.6 770,078 - Pf1N1B4_673 0.34 +2.3 770,246 + Pf1N1B4_673 0.51 -0.6 770,247 - Pf1N1B4_673 0.51 +0.6 770,466 - Pf1N1B4_673 0.73 +1.0 770,548 - Pf1N1B4_673 0.81 -1.5 770,548 - Pf1N1B4_673 0.81 -2.3 770,817 - +0.2 770,846 + -0.4 770,895 - +0.7 770,895 - -0.6 771,146 + Pf1N1B4_674 0.15 +0.5 771,147 - +1.0 771,147 - Pf1N1B4_674 0.15 -0.5 771,147 - Pf1N1B4_674 0.15 +0.2 771,147 - Pf1N1B4_674 0.15 +0.4 771,185 - Pf1N1B4_674 0.18 +0.4 771,227 - Pf1N1B4_674 0.21 -0.0 771,227 - Pf1N1B4_674 0.21 +1.3 771,227 - Pf1N1B4_674 0.21 -0.6 771,227 - Pf1N1B4_674 0.21 -1.0 771,227 - Pf1N1B4_674 0.21 -0.6 771,227 - Pf1N1B4_674 0.21 -2.5 771,227 - Pf1N1B4_674 0.21 +0.6 771,394 + Pf1N1B4_674 0.34 +0.4 771,395 - Pf1N1B4_674 0.34 +1.4 771,421 + +0.6 771,421 + Pf1N1B4_674 0.36 +0.2 771,422 - Pf1N1B4_674 0.36 -0.6 771,422 - Pf1N1B4_674 0.36 -0.0 771,462 + Pf1N1B4_674 0.39 +1.2 771,462 + +1.0 771,639 + Pf1N1B4_674 0.52 -0.6 771,639 + Pf1N1B4_674 0.52 +0.1 771,639 + +1.0 771,640 - Pf1N1B4_674 0.52 +2.0 771,640 - Pf1N1B4_674 0.52 -2.5
Or see this region's nucleotide sequence