Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2329

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,648,286	-				+0.6
2,648,324	-				-1.0
2,648,324	-				-0.1
2,648,393	+				+0.1
2,648,393	+				+2.5
2,648,393	+				+1.3
2,648,393	+				+0.9
2,648,393	+				+0.6
2,648,393	+				+1.9
2,648,394	-				-0.7
2,648,394	-				+1.0
2,648,394	-				+2.6
2,648,394	-				-0.9
2,648,394	-				-0.2
2,648,394	-				-0.1
2,648,394	-				+2.3
2,648,394	-				-0.6
2,648,397	+				+0.4
2,648,397	+				+0.5
2,648,398	-				-0.3
2,648,407	+				-0.2
2,648,407	+				+1.3
2,648,407	+				+0.1
2,648,408	-				+0.3
2,648,408	-				-0.7
2,648,408	-				-1.0
2,648,453	+		Pf1N1B4_2328	0.15	-1.0
2,648,453	+		Pf1N1B4_2328	0.15	-0.7
2,648,453	+		Pf1N1B4_2328	0.15	-1.9
2,648,453	+		Pf1N1B4_2328	0.15	-0.4
2,648,453	+		Pf1N1B4_2328	0.15	-0.1
2,648,453	+		Pf1N1B4_2328	0.15	-0.2
2,648,453	+		Pf1N1B4_2328	0.15	-1.0
2,648,454	-		Pf1N1B4_2328	0.15	-0.0
2,648,454	-		Pf1N1B4_2328	0.15	+0.7
2,648,454	-		Pf1N1B4_2328	0.15	-1.7
2,648,454	-		Pf1N1B4_2328	0.15	+0.9
2,648,454	-		Pf1N1B4_2328	0.15	-1.2
2,648,454	-		Pf1N1B4_2328	0.15	+0.2
2,648,454	-		Pf1N1B4_2328	0.15	-0.8
2,648,454	-		Pf1N1B4_2328	0.15	-1.3
2,648,454	-		Pf1N1B4_2328	0.15	+1.6
2,648,454	-		Pf1N1B4_2328	0.15	-0.4
2,648,510	-		Pf1N1B4_2328	0.23	-1.0
2,648,615	+		Pf1N1B4_2328	0.37	-1.7
2,648,615	+		Pf1N1B4_2328	0.37	+0.3
2,648,616	-		Pf1N1B4_2328	0.37	+3.3
2,648,616	-		Pf1N1B4_2328	0.37	+0.3
2,648,616	-		Pf1N1B4_2328	0.37	+0.2
2,648,616	-		Pf1N1B4_2328	0.37	-1.5
2,648,616	-		Pf1N1B4_2328	0.37	+2.3
2,648,616	-		Pf1N1B4_2328	0.37	+0.1
2,649,007	+				+0.0
2,649,007	+				-1.5
2,649,058	+				-0.9
2,649,069	+				-1.3
2,649,069	+				-1.7
2,649,070	-				-2.2
2,649,070	-				-1.7
2,649,070	-				+2.3
2,649,105	+				+0.2
2,649,105	+				-0.0
2,649,106	-				+0.5
2,649,107	+				-0.7
2,649,107	+				+1.5
2,649,107	+				-0.8
2,649,107	+				+0.6
2,649,107	+				+0.6
2,649,107	+				-0.5
2,649,107	+				+0.3
2,649,107	+				-0.7
2,649,107	+				-1.0
2,649,107	+				+1.0
2,649,107	+				+0.7
2,649,107	+				+1.0
2,649,108	-				-1.2
2,649,108	-				+0.1
2,649,108	-				+0.3
2,649,108	-				+1.3
2,649,108	-				-0.7
2,649,108	-				-0.1
2,649,108	-				-0.8
2,649,108	-				+1.3
2,649,108	-				-0.7
2,649,108	-				-0.8
2,649,108	-				-1.3
2,649,108	-				-2.7
2,649,108	-				-1.3
2,649,108	-				+1.7
2,649,108	-				+0.7
2,649,108	-				+0.7
2,649,276	+		Pf1N1B4_2329	0.35	+1.0
2,649,277	-		Pf1N1B4_2329	0.36	-1.3
2,649,277	-		Pf1N1B4_2329	0.36	+0.9
2,649,277	-		Pf1N1B4_2329	0.36	+0.8
2,649,277	-		Pf1N1B4_2329	0.36	+1.8
2,649,277	-		Pf1N1B4_2329	0.36	+0.9
2,649,277	-		Pf1N1B4_2329	0.36	+0.6
2,649,277	-		Pf1N1B4_2329	0.36	+1.7
2,649,290	+		Pf1N1B4_2329	0.39	+1.5
2,649,310	+		Pf1N1B4_2329	0.45	-1.0
2,649,311	-		Pf1N1B4_2329	0.45	+0.6
2,649,311	-		Pf1N1B4_2329	0.45	-0.4
2,649,402	+		Pf1N1B4_2329	0.69	+0.2
2,649,402	+		Pf1N1B4_2329	0.69	+0.9
2,649,402	+		Pf1N1B4_2329	0.69	-1.3
2,649,784	+		Pf1N1B4_2330	0.89	-0.6
2,649,852	+				-0.2
2,649,881	+				+0.3
2,649,911	+				-1.5
2,649,911	+				-1.1
2,649,911	+				-2.3
2,649,912	-				-0.0
2,649,915	+				-0.5
2,649,915	+				-0.7
2,649,915	+				-1.0
2,649,915	+				-1.0
2,649,916	-				-0.3
2,649,934	+				+0.1
2,649,934	+				+0.3
2,649,935	-				+1.3
2,649,939	-				+1.3
2,650,083	+		Pf1N1B4_2331	0.27	+1.3
2,650,084	-		Pf1N1B4_2331	0.27	-1.0
2,650,084	-		Pf1N1B4_2331	0.27	+1.9
2,650,098	-		Pf1N1B4_2331	0.29	+0.1
2,650,284	+		Pf1N1B4_2331	0.52	-1.2
2,650,284	+		Pf1N1B4_2331	0.52	+1.0
2,650,284	+		Pf1N1B4_2331	0.52	+0.4
2,650,284	+		Pf1N1B4_2331	0.52	-0.8
2,650,284	+		Pf1N1B4_2331	0.52	-0.7
2,650,285	-		Pf1N1B4_2331	0.53	-1.7
2,650,285	-		Pf1N1B4_2331	0.53	+2.6