Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3485

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
4,153,873	-				-4.4
4,153,899	-				+3.7
4,153,899	-				-0.6
4,153,900	+				+3.7
4,153,900	+				+3.0
4,153,900	+				+1.0
4,153,900	+				-2.2
4,153,900	+				+3.3
4,153,900	+				+3.3
4,153,900	+				-0.2
4,153,900	+				+3.2
4,153,900	+				+3.3
4,153,900	+				-3.3
4,153,900	+				+0.0
4,153,900	+				+1.0
4,153,900	+				-0.1
4,153,900	+				+2.8
4,153,900	+				+2.0
4,153,900	+				-1.6
4,153,900	+				-2.5
4,153,900	+				+0.0
4,153,900	+				-2.3
4,153,900	+				-2.1
4,153,900	+				+3.5
4,153,900	+				-0.1
4,153,900	+				+0.4
4,153,901	-				-0.4
4,153,901	-				-1.8
4,153,901	-				-2.0
4,153,901	-				+3.6
4,153,901	-				+2.6
4,153,901	-				+0.0
4,153,901	-				+3.2
4,153,901	-				+2.0
4,153,901	-				+2.6
4,153,901	-				-0.8
4,153,901	-				-1.2
4,153,901	-				-4.6
4,153,901	-				-1.9
4,153,901	-				+2.3
4,153,901	-				-3.8
4,153,901	-				+0.0
4,153,901	-				+3.2
4,153,901	-				-1.9
4,153,901	-				-1.7
4,153,901	-				-2.8
4,153,901	-				-2.1
4,153,905	+				-0.3
4,153,905	+				+2.3
4,153,905	+				-1.7
4,154,073	+		Psyr_3484	0.25	+2.3
4,154,073	+		Psyr_3484	0.25	+0.3
4,154,074	-		Psyr_3484	0.25	+0.5
4,154,074	-		Psyr_3484	0.25	-1.8
4,154,180	+		Psyr_3484	0.36	+3.3
4,154,194	-		Psyr_3484	0.38	+3.2
4,154,347	+		Psyr_3484	0.55	-2.3
4,154,347	+		Psyr_3484	0.55	-2.9
4,154,691	-				+1.6
4,154,758	+				+0.0
4,154,758	+				+1.0
4,154,758	+				-3.3
4,154,759	-				+0.0
4,154,759	-				-0.2
4,154,759	-				+0.1
4,154,759	-				-3.4
4,154,869	+				+0.0
4,154,869	+				-4.1
4,154,869	+				+1.2
4,154,869	+				-1.1
4,154,869	+				+1.6
4,154,869	+				-3.9
4,154,869	+				+1.0
4,154,869	+				+0.0
4,154,870	-				-0.2
4,154,870	-				+3.2
4,154,870	-				+0.4
4,154,902	+				-2.4
4,154,903	-				-0.8
4,155,016	+		Psyr_3485	0.19	+1.6
4,155,016	+		Psyr_3485	0.19	+2.0
4,155,016	+		Psyr_3485	0.19	+1.0
4,155,016	+		Psyr_3485	0.19	-0.3
4,155,017	-		Psyr_3485	0.19	+1.6
4,155,017	-		Psyr_3485	0.19	+6.3
4,155,017	-		Psyr_3485	0.19	+2.5
4,155,017	-		Psyr_3485	0.19	+2.6
4,155,025	-		Psyr_3485	0.20	-1.0
4,155,025	-		Psyr_3485	0.20	+1.5
4,155,025	-		Psyr_3485	0.20	-1.8
4,155,025	-		Psyr_3485	0.20	+0.9
4,155,025	-		Psyr_3485	0.20	+2.0
4,155,025	-		Psyr_3485	0.20	-1.0
4,155,067	+		Psyr_3485	0.25	+2.8
4,155,068	-		Psyr_3485	0.25	+0.3
4,155,068	-		Psyr_3485	0.25	+0.7
4,155,068	-		Psyr_3485	0.25	-0.3
4,155,068	-		Psyr_3485	0.25	-1.1
4,155,147	+		Psyr_3485	0.35	+2.0
4,155,147	+		Psyr_3485	0.35	-0.5
4,155,147	+		Psyr_3485	0.35	-2.9
4,155,147	+		Psyr_3485	0.35	+0.0
4,155,228	-		Psyr_3485	0.44	-1.0
4,155,228	-		Psyr_3485	0.44	+3.0
4,155,440	-		Psyr_3485	0.69	-0.8
4,155,598	+		Psyr_3485	0.88	-4.0
4,155,599	-		Psyr_3485	0.88	+1.0
4,155,599	-		Psyr_3485	0.88	+3.6
4,155,672	-				+0.2
4,155,678	-				+2.3
4,155,736	+				-1.1
4,155,860	+		Psyr_3486	0.13	-0.2
4,155,903	+		Psyr_3486	0.18	+3.2
4,155,920	+				+1.0
4,155,922	+		Psyr_3486	0.20	-2.6
4,155,922	+		Psyr_3486	0.20	-1.3
4,155,923	-		Psyr_3486	0.20	+3.4
4,155,923	-		Psyr_3486	0.20	-0.6
4,156,012	+		Psyr_3486	0.30	+0.0
4,156,012	+		Psyr_3486	0.30	+0.0
4,156,013	-		Psyr_3486	0.30	+0.4
4,156,268	-		Psyr_3486	0.57	-2.7
4,156,372	+		Psyr_3486	0.69	+1.6
4,156,469	+		Psyr_3486	0.79	-0.6
4,156,533	+		Psyr_3486	0.86	-1.6
4,156,533	+		Psyr_3486	0.86	-3.0
4,156,533	+		Psyr_3486	0.86	-2.8
4,156,533	+		Psyr_3486	0.86	-0.6
4,156,533	+		Psyr_3486	0.86	+3.0
4,156,533	+		Psyr_3486	0.86	-0.7
4,156,534	-		Psyr_3486	0.86	+3.0
4,156,534	-		Psyr_3486	0.86	+0.0
4,156,542	+		Psyr_3486	0.87	+2.4