Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2787

Experiment: KB with Mitomycin C 0.625 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Mitomycin C 0.625 ug/ml
3,370,676	+		Psyr_2785	0.54	+2.9
3,370,677	-		Psyr_2785	0.54	+5.0
3,370,677	-		Psyr_2785	0.54	+4.3
3,370,876	+		Psyr_2785	0.84	+4.9
3,370,877	-		Psyr_2785	0.85	+6.5
3,370,877	-		Psyr_2785	0.85	+0.9
3,370,997	-				-3.1
3,371,199	+		Psyr_2786	0.61	+1.2
3,371,199	+		Psyr_2786	0.61	-1.3
3,371,200	-		Psyr_2786	0.61	+1.5
3,371,200	-		Psyr_2786	0.61	+5.0
3,371,200	-		Psyr_2786	0.61	+5.1
3,371,276	+		Psyr_2786	0.82	+3.5
3,371,277	-		Psyr_2786	0.82	-0.6
3,371,301	+		Psyr_2786	0.89	+2.9
3,371,301	+		Psyr_2786	0.89	+6.0
3,371,301	+		Psyr_2786	0.89	+0.8
3,371,302	-		Psyr_2786	0.89	-0.7
3,371,332	+				+3.0
3,371,346	+				+0.9
3,371,346	+				-0.2
3,371,346	+				+4.9
3,371,346	+				+1.6
3,371,347	-				+2.6
3,371,347	-				+4.8
3,371,347	-				+6.0
3,371,397	+				+2.2
3,371,397	+				-0.4
3,371,398	-				+1.9
3,371,413	+				+2.5
3,371,413	+				+3.1
3,371,414	-				+5.8
3,371,425	+				+4.4
3,371,425	+				+1.3
3,371,425	+				+1.2
3,371,448	+				+2.0
3,371,448	+				+6.3
3,371,448	+				+2.6
3,371,448	+				+2.0
3,371,451	+				+5.6
3,371,452	-				-0.2
3,371,531	+				+5.5
3,371,531	+				+5.6
3,371,531	+				+0.6
3,371,531	+				+0.8
3,371,532	-				+2.9
3,371,532	-				+4.1
3,371,532	-				+6.2
3,371,637	+				+6.5
3,371,638	-				-1.3
3,371,640	-				+1.9
3,371,644	+				+4.7
3,371,644	+				+6.1
3,371,644	+				+0.8
3,371,644	+				+1.3
3,371,644	+				+3.1
3,371,644	+				+1.5
3,371,644	+				+1.5
3,371,644	+				+3.9
3,371,644	+				+5.7
3,371,644	+				+2.5
3,371,644	+				+1.3
3,371,645	-				+4.4
3,371,645	-				+3.9
3,371,645	-				+5.7
3,371,645	-				+2.6
3,371,645	-				+5.7
3,371,645	-				+6.3
3,371,645	-				+5.8
3,371,645	-				+6.1
3,371,645	-				+1.0
3,371,645	-				+5.3
3,371,645	-				+6.5
3,371,645	-				+6.0
3,371,645	-				+3.6
3,371,645	-				-0.2
3,371,675	+				+0.9
3,371,675	+				+2.3
3,371,675	+				+2.6
3,371,676	-				-0.1
3,371,676	-				+1.0
3,371,676	-				+2.9
3,371,712	-				+6.4
3,371,789	+		Psyr_2787	0.23	+2.1
3,371,850	+		Psyr_2787	0.35	+0.6
3,371,901	-		Psyr_2787	0.45	+3.3
3,372,102	-		Psyr_2787	0.85	+0.7
3,372,128	+				+0.6
3,372,128	+				+0.3
3,372,129	-				+5.0
3,372,179	+				+0.2
3,372,179	+				-0.2
3,372,179	+				-2.1
3,372,180	-				+1.8
3,372,180	-				+4.8
3,372,180	-				+5.2
3,372,180	-				+6.0
3,372,180	-				+1.7
3,372,253	+		Psyr_2788	0.17	+3.0
3,372,253	+		Psyr_2788	0.17	+5.8
3,372,308	+		Psyr_2788	0.29	+5.3
3,372,308	+		Psyr_2788	0.29	+4.4
3,372,308	+		Psyr_2788	0.29	-0.6
3,372,309	-		Psyr_2788	0.29	+2.9
3,372,467	+		Psyr_2788	0.64	+0.4
3,372,467	+		Psyr_2788	0.64	+5.3
3,372,467	+		Psyr_2788	0.64	+4.8
3,372,467	+		Psyr_2788	0.64	+4.9
3,372,468	-		Psyr_2788	0.64	+4.7
3,372,468	-				+4.4
3,372,593	+				+4.3
3,372,861	-		Psyr_2789	0.22	+0.3
3,372,989	+		Psyr_2789	0.35	+1.1
3,372,990	-		Psyr_2789	0.36	+4.1
3,372,990	-		Psyr_2789	0.36	+2.5
3,373,014	-		Psyr_2789	0.38	+5.1
3,373,053	-		Psyr_2789	0.42	+2.2
3,373,053	-		Psyr_2789	0.42	+4.7