Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2254

Experiment: Spectinomycin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.05 mg/ml
2,568,741	+				-0.4
2,568,742	-				+0.4
2,568,742	-				-0.2
2,568,742	-				-1.4
2,568,754	-				-0.2
2,568,754	-				+0.0
2,568,754	-				+0.1
2,568,765	+				+0.0
2,568,765	+				-0.0
2,568,766	-				-1.2
2,568,766	-				-1.2
2,568,766	-				-1.2
2,568,840	+		Pf1N1B4_2253	0.19	-0.9
2,568,840	+		Pf1N1B4_2253	0.19	+0.8
2,568,840	+		Pf1N1B4_2253	0.19	-0.4
2,568,840	+		Pf1N1B4_2253	0.19	-0.2
2,568,840	+		Pf1N1B4_2253	0.19	-2.2
2,568,840	+		Pf1N1B4_2253	0.19	+1.4
2,568,840	+				-0.6
2,568,840	+		Pf1N1B4_2253	0.19	-0.9
2,568,840	+		Pf1N1B4_2253	0.19	+0.7
2,568,840	+		Pf1N1B4_2253	0.19	+0.4
2,568,840	+		Pf1N1B4_2253	0.19	+1.0
2,568,840	+		Pf1N1B4_2253	0.19	-0.3
2,568,840	+		Pf1N1B4_2253	0.19	-0.0
2,568,840	+		Pf1N1B4_2253	0.19	+0.8
2,568,841	-		Pf1N1B4_2253	0.19	-0.9
2,568,841	-		Pf1N1B4_2253	0.19	+0.7
2,568,841	-		Pf1N1B4_2253	0.19	-0.2
2,568,841	-		Pf1N1B4_2253	0.19	-0.2
2,568,841	-		Pf1N1B4_2253	0.19	-0.9
2,568,841	-				+1.4
2,568,841	-		Pf1N1B4_2253	0.19	+1.1
2,568,841	-		Pf1N1B4_2253	0.19	+2.4
2,568,841	-		Pf1N1B4_2253	0.19	-0.8
2,569,035	+		Pf1N1B4_2253	0.50	-0.8
2,569,035	+		Pf1N1B4_2253	0.50	+1.8
2,569,035	+		Pf1N1B4_2253	0.50	-0.2
2,569,036	-		Pf1N1B4_2253	0.50	+0.0
2,569,233	+		Pf1N1B4_2253	0.81	+1.4
2,569,381	+				-0.2
2,569,381	+				-2.7
2,569,381	+				-2.8
2,569,382	-				+0.7
2,569,382	-				-1.9
2,569,382	-				+0.7
2,569,429	+				-1.9
2,569,464	+				+0.1
2,569,464	+				+2.4
2,569,464	+				+1.0
2,569,464	+				-0.2
2,569,464	+				+0.9
2,569,464	+				-0.0
2,569,464	+				-0.3
2,569,464	+				+0.8
2,569,464	+				+1.0
2,569,464	+				-0.4
2,569,464	+				-1.4
2,569,464	+				+0.1
2,569,464	+				+1.2
2,569,465	-				+2.0
2,569,465	-				+1.4
2,569,465	-				+1.3
2,569,465	-				-1.9
2,569,465	-				-0.8
2,569,465	-				-0.7
2,569,465	-				-1.4
2,569,465	-				+1.4
2,569,465	-				-0.4
2,569,465	-				-0.6
2,569,465	-				-0.2
2,569,465	-				-2.0
2,569,465	-				-1.7
2,569,465	-				-0.6
2,569,465	-				-0.6
2,569,494	-				+0.0
2,569,524	+				+0.4
2,569,524	+				-0.0
2,569,545	+				+0.7
2,569,580	+				+1.0
2,569,595	+				-0.2
2,569,596	-				-0.4
2,569,604	+				-0.9
2,569,604	+				-0.5
2,569,604	+				-0.6
2,569,604	+				+3.0
2,569,605	-				-0.1
2,569,605	-				-1.4
2,569,605	-				+0.4
2,569,605	-				-0.5
2,569,654	-				-1.6
2,569,676	+				-0.6
2,569,676	+				-0.8
2,569,676	+				-1.0
2,569,676	+				-0.6
2,569,676	+				+0.5
2,569,677	-				-0.7
2,569,677	-				-1.4
2,569,691	+				+1.4
2,569,691	+				+0.2
2,569,691	+				+1.2
2,569,691	+				-0.6
2,569,691	+				+0.8
2,569,692	-				+0.6
2,569,692	-				-1.2
2,569,692	-				+3.0
2,569,692	-				+1.0
2,569,692	-				-1.2
2,569,692	-				+2.0
2,569,772	+		Pf1N1B4_2254	0.15	+0.4
2,569,772	+		Pf1N1B4_2254	0.15	+0.8
2,569,773	-		Pf1N1B4_2254	0.15	-0.2
2,569,773	-		Pf1N1B4_2254	0.15	-0.7
2,569,786	+		Pf1N1B4_2254	0.16	-0.2
2,569,786	+		Pf1N1B4_2254	0.16	+0.8
2,569,787	-		Pf1N1B4_2254	0.16	-2.5
2,569,942	-		Pf1N1B4_2254	0.28	+0.1
2,569,979	+		Pf1N1B4_2254	0.31	+0.6
2,569,979	+		Pf1N1B4_2254	0.31	+0.6
2,569,979	+		Pf1N1B4_2254	0.31	+0.8
2,569,979	+		Pf1N1B4_2254	0.31	+0.4
2,569,979	+		Pf1N1B4_2254	0.31	-0.1
2,569,979	+		Pf1N1B4_2254	0.31	+1.8
2,569,979	+		Pf1N1B4_2254	0.31	+0.4
2,569,979	+		Pf1N1B4_2254	0.31	-1.8
2,569,979	+		Pf1N1B4_2254	0.31	+0.2
2,569,979	+		Pf1N1B4_2254	0.31	+1.8
2,569,980	-		Pf1N1B4_2254	0.31	+0.5
2,569,980	-		Pf1N1B4_2254	0.31	-0.6
2,569,980	-		Pf1N1B4_2254	0.31	+0.7
2,569,980	-		Pf1N1B4_2254	0.31	+0.2
2,569,980	-		Pf1N1B4_2254	0.31	-0.2
2,569,980	-		Pf1N1B4_2254	0.31	-0.4
2,570,003	+		Pf1N1B4_2254	0.33	+1.4
2,570,130	+		Pf1N1B4_2254	0.43	+1.1
2,570,220	-		Pf1N1B4_2254	0.50	+0.3
2,570,397	-		Pf1N1B4_2254	0.64	-0.4
2,570,397	-		Pf1N1B4_2254	0.64	-1.8
2,570,397	-		Pf1N1B4_2254	0.64	-0.0
2,570,420	+		Pf1N1B4_2254	0.66	-1.3
2,570,421	-		Pf1N1B4_2254	0.66	+0.5
2,570,507	+		Pf1N1B4_2254	0.72	+1.0
2,570,508	-		Pf1N1B4_2254	0.73	-0.4
2,570,508	-		Pf1N1B4_2254	0.73	+2.2
2,570,632	+		Pf1N1B4_2254	0.82	+1.1
2,570,633	-		Pf1N1B4_2254	0.82	+1.1
2,570,761	-				-0.2
2,570,773	+				-1.8
2,570,773	+				-0.4
2,570,773	+				-1.7
2,570,774	-				-0.2
2,570,774	-				+1.4
2,570,774	-				+0.2
2,570,805	-				-0.2
2,570,805	-				-0.2
2,570,859	+				-0.6
2,570,882	+				+1.8
2,570,883	-				-1.2
2,570,883	-				+0.6
2,570,982	-				-1.5
2,571,201	-				+0.7
2,571,217	+				+0.8
2,571,217	+				-0.2
2,571,218	-				+0.1
2,571,218	-				-0.2
2,571,315	+		Pf1N1B4_2255	0.10	+0.4
2,571,315	+		Pf1N1B4_2255	0.10	+0.9
2,571,315	+		Pf1N1B4_2255	0.10	-0.2
2,571,315	+		Pf1N1B4_2255	0.10	+1.5
2,571,315	+		Pf1N1B4_2255	0.10	+0.5
2,571,315	+				-0.6
2,571,315	+		Pf1N1B4_2255	0.10	+1.2
2,571,315	+		Pf1N1B4_2255	0.10	-1.0
2,571,315	+		Pf1N1B4_2255	0.10	-1.9
2,571,316	-		Pf1N1B4_2255	0.11	+1.9
2,571,316	-		Pf1N1B4_2255	0.11	-2.0
2,571,316	-		Pf1N1B4_2255	0.11	+0.2
2,571,316	-		Pf1N1B4_2255	0.11	+0.1
2,571,316	-		Pf1N1B4_2255	0.11	+0.8
2,571,316	-		Pf1N1B4_2255	0.11	+0.2
2,571,319	+		Pf1N1B4_2255	0.11	+1.0
2,571,320	-		Pf1N1B4_2255	0.11	-1.0
2,571,379	+		Pf1N1B4_2255	0.19	-1.4
2,571,380	-		Pf1N1B4_2255	0.19	-1.2
2,571,380	-		Pf1N1B4_2255	0.19	+0.0
2,571,380	-		Pf1N1B4_2255	0.19	+1.3
2,571,380	-		Pf1N1B4_2255	0.19	-0.6
2,571,440	+		Pf1N1B4_2255	0.27	+1.1
2,571,440	+		Pf1N1B4_2255	0.27	-1.2
2,571,440	+		Pf1N1B4_2255	0.27	-1.4
2,571,441	-		Pf1N1B4_2255	0.27	-0.7
2,571,441	-		Pf1N1B4_2255	0.27	-0.6
2,571,441	-		Pf1N1B4_2255	0.27	+0.2
2,571,441	-		Pf1N1B4_2255	0.27	+1.4
2,571,441	-		Pf1N1B4_2255	0.27	-0.6
2,571,443	+				+2.4
2,571,443	+		Pf1N1B4_2255	0.27	+2.0
2,571,445	+		Pf1N1B4_2255	0.27	+1.4
2,571,445	+		Pf1N1B4_2255	0.27	+0.2
2,571,445	+		Pf1N1B4_2255	0.27	-1.6
2,571,445	+		Pf1N1B4_2255	0.27	+1.6
2,571,445	+		Pf1N1B4_2255	0.27	+0.4
2,571,445	+		Pf1N1B4_2255	0.27	+0.3
2,571,445	+		Pf1N1B4_2255	0.27	-0.2
2,571,445	+		Pf1N1B4_2255	0.27	-0.2
2,571,446	-		Pf1N1B4_2255	0.27	-1.5
2,571,446	-		Pf1N1B4_2255	0.27	+2.4
2,571,446	-		Pf1N1B4_2255	0.27	+1.1
2,571,446	-		Pf1N1B4_2255	0.27	-1.6
2,571,446	-		Pf1N1B4_2255	0.27	+0.3
2,571,446	-		Pf1N1B4_2255	0.27	-1.2
2,571,446	-				+0.8
2,571,446	-		Pf1N1B4_2255	0.27	-0.9
2,571,446	-		Pf1N1B4_2255	0.27	-0.6
2,571,446	-		Pf1N1B4_2255	0.27	-0.9
2,571,459	+		Pf1N1B4_2255	0.29	+1.4
2,571,459	+		Pf1N1B4_2255	0.29	-0.1
2,571,461	+		Pf1N1B4_2255	0.29	+0.8
2,571,485	+		Pf1N1B4_2255	0.32	-0.2
2,571,486	-		Pf1N1B4_2255	0.32	+1.2
2,571,486	-		Pf1N1B4_2255	0.32	-0.3
2,571,727	+		Pf1N1B4_2255	0.63	-2.3
2,571,727	+		Pf1N1B4_2255	0.63	-0.2
2,571,727	+		Pf1N1B4_2255	0.63	+0.2
2,571,727	+		Pf1N1B4_2255	0.63	+0.4
2,571,727	+		Pf1N1B4_2255	0.63	+1.7
2,571,728	-		Pf1N1B4_2255	0.64	+0.8