Experiment: m.b. Chloramphenicol 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10850 and CA264_10855 overlap by 1 nucleotides CA264_10855 and CA264_10860 are separated by 76 nucleotides CA264_10860 and CA264_10865 are separated by 28 nucleotides
CA264_10850: CA264_10850 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase, at 2,508,054 to 2,509,517
_10850
CA264_10855: CA264_10855 - cell division protein, at 2,509,517 to 2,511,529
_10855
CA264_10860: CA264_10860 - hypothetical protein, at 2,511,606 to 2,512,037
_10860
CA264_10865: CA264_10865 - 16S rRNA (cytosine(1402)-N(4))-methyltransferase, at 2,512,066 to 2,512,986
_10865
Position (kb)
2509
2510
2511
2512 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2509.523 kb on - strand at 2509.526 kb on + strand at 2509.526 kb on + strand at 2509.527 kb on - strand at 2509.554 kb on - strand at 2509.638 kb on - strand at 2509.763 kb on - strand, within CA264_10855 at 2511.596 kb on + strand at 2511.897 kb on + strand, within CA264_10860 at 2511.907 kb on + strand, within CA264_10860 at 2511.907 kb on + strand, within CA264_10860 at 2512.024 kb on - strand at 2512.057 kb on + strand at 2512.058 kb on - strand at 2512.067 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloramphenicol 0.001 mg/ml remove 2,509,523 - -0.4 2,509,526 + +0.7 2,509,526 + +0.0 2,509,527 - -0.9 2,509,554 - -0.2 2,509,638 - -0.9 2,509,763 - CA264_10855 0.12 -0.6 2,511,596 + -3.5 2,511,897 + CA264_10860 0.67 +0.4 2,511,907 + CA264_10860 0.70 -1.4 2,511,907 + CA264_10860 0.70 -0.9 2,512,024 - +0.3 2,512,057 + +0.2 2,512,058 - +0.3 2,512,067 + -0.1
Or see this region's nucleotide sequence