Experiment: KB-half, Pseudo5 supernatant
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25140 and AO356_25145 are separated by 206 nucleotides AO356_25145 and AO356_25150 are separated by 87 nucleotides AO356_25150 and AO356_25155 overlap by 4 nucleotides
AO356_25140: AO356_25140 - transcriptional regulator, at 5,689,551 to 5,691,083
_25140
AO356_25145: AO356_25145 - pyridoxine 5'-phosphate oxidase, at 5,691,290 to 5,691,937
_25145
AO356_25150: AO356_25150 - molybdenum cofactor biosynthesis protein B, at 5,692,025 to 5,692,579
_25150
AO356_25155: AO356_25155 - molybdenum cofactor biosynthesis protein MoaA, at 5,692,576 to 5,693,811
_25155
Position (kb) 5691
5692 Strain fitness (log2 ratio) -1
0
1 at 5690.578 kb on - strand, within AO356_25140 at 5690.728 kb on + strand, within AO356_25140 at 5690.736 kb on + strand, within AO356_25140 at 5691.053 kb on + strand at 5691.054 kb on - strand at 5691.054 kb on - strand at 5691.054 kb on - strand at 5691.081 kb on + strand at 5691.082 kb on - strand at 5691.274 kb on - strand at 5691.324 kb on - strand at 5691.533 kb on + strand, within AO356_25145 at 5691.533 kb on + strand, within AO356_25145 at 5691.533 kb on + strand, within AO356_25145 at 5691.533 kb on + strand, within AO356_25145 at 5691.616 kb on - strand, within AO356_25145 at 5691.665 kb on + strand, within AO356_25145 at 5691.950 kb on + strand at 5691.966 kb on + strand at 5691.966 kb on + strand at 5692.075 kb on + strand at 5692.187 kb on - strand, within AO356_25150 at 5692.190 kb on + strand, within AO356_25150 at 5692.191 kb on - strand, within AO356_25150 at 5692.191 kb on - strand, within AO356_25150 at 5692.888 kb on - strand, within AO356_25155
Per-strain Table
Position Strand Gene LocusTag Fraction KB-half, Pseudo5 supernatant remove 5,690,578 - AO356_25140 0.67 -0.8 5,690,728 + AO356_25140 0.77 +1.2 5,690,736 + AO356_25140 0.77 -0.8 5,691,053 + -1.2 5,691,054 - +0.4 5,691,054 - +0.4 5,691,054 - +0.8 5,691,081 + -0.2 5,691,082 - +0.8 5,691,274 - +1.4 5,691,324 - -0.2 5,691,533 + AO356_25145 0.38 -0.6 5,691,533 + AO356_25145 0.38 -0.2 5,691,533 + AO356_25145 0.38 -1.2 5,691,533 + AO356_25145 0.38 -1.2 5,691,616 - AO356_25145 0.50 -1.2 5,691,665 + AO356_25145 0.58 -1.2 5,691,950 + -0.8 5,691,966 + -0.9 5,691,966 + +1.2 5,692,075 + +0.4 5,692,187 - AO356_25150 0.29 -0.2 5,692,190 + AO356_25150 0.30 +1.4 5,692,191 - AO356_25150 0.30 +0.6 5,692,191 - AO356_25150 0.30 +0.2 5,692,888 - AO356_25155 0.25 -0.2
Or see this region's nucleotide sequence