Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1701

Experiment: Gentamicin 0.00048828125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.00048828125 mg/ml
1,767,914	-				+0.3
1,768,001	+				-3.3
1,768,011	-		Synpcc7942_1701	0.11	-4.5
1,768,066	-		Synpcc7942_1701	0.21	-5.3
1,768,071	-		Synpcc7942_1701	0.22	-4.9
1,768,071	-				-3.3
1,768,459	+				+0.6
1,768,466	+				-1.7
1,768,492	-				+1.1
1,768,492	-				+1.2
1,768,492	-				+1.3
1,768,507	-				-0.1
1,768,517	+				+1.0
1,768,544	-				+2.0
1,768,571	-		Synpcc7942_1702	0.19	-0.7
1,768,589	+		Synpcc7942_1702	0.32	-0.9
1,768,608	+		Synpcc7942_1702	0.46	+1.6
1,768,608	+		Synpcc7942_1702	0.46	-0.7
1,768,624	-		Synpcc7942_1702	0.57	+0.5
1,768,652	+		Synpcc7942_1702	0.78	+1.3
1,768,660	-		Synpcc7942_1702	0.83	-0.4
1,768,660	-		Synpcc7942_1702	0.83	+1.1
1,768,702	+				+0.7
1,768,725	+				+0.8
1,768,728	-				-1.7
1,768,730	+				+1.0
1,768,735	+				+2.2
1,768,735	+				-1.7
1,768,743	-				+2.5
1,768,743	-				-1.7
1,768,834	+				+0.6
1,768,836	-				+1.7
1,768,837	-				+0.8
1,768,847	+				-0.5
1,768,852	+				+0.3
1,768,860	-				-0.1
1,768,876	-				-0.2
1,768,893	-				+2.2
1,768,897	+				+0.2
1,768,897	+				+1.2
1,768,899	+				-3.3
1,768,899	+				-1.4
1,768,904	-				-0.1
1,768,905	-				-0.3
1,768,905	-				+0.0
1,768,907	-				+1.7
1,768,912	+				-2.9
1,768,920	-				+0.6
1,768,920	-				+0.6
1,768,925	+				+0.5
1,768,930	+				+0.9
1,768,930	+				-0.5
1,768,933	-				-1.1
1,768,966	+				-5.5
1,768,989	+				-4.3
1,768,989	+				-3.7
1,768,998	-				-3.3
1,769,017	-				-5.4
1,769,021	-				-5.5
1,769,040	-				-5.7
1,769,041	-				-2.7
1,769,109	-				-3.7
1,769,119	-				-3.7
1,769,203	+				-2.7
1,769,261	+	ams1	Synpcc7942_1703	0.10	-2.7
1,769,299	+	ams1	Synpcc7942_1703	0.12	-2.7
1,769,322	+	ams1	Synpcc7942_1703	0.12	-2.7
1,769,340	-	ams1	Synpcc7942_1703	0.13	-6.3
1,769,340	-	ams1	Synpcc7942_1703	0.13	-5.4
1,769,340	-	ams1	Synpcc7942_1703	0.13	-2.3
1,769,355	+	ams1	Synpcc7942_1703	0.13	-3.3
1,769,369	+	ams1	Synpcc7942_1703	0.14	-5.5
1,769,372	+	ams1	Synpcc7942_1703	0.14	-3.3
1,769,372	+	ams1	Synpcc7942_1703	0.14	-4.3
1,769,372	+	ams1	Synpcc7942_1703	0.14	-4.7
1,769,372	+	ams1	Synpcc7942_1703	0.14	-4.3
1,769,377	+	ams1	Synpcc7942_1703	0.14	-2.7
1,769,380	-	ams1	Synpcc7942_1703	0.14	-5.4
1,769,380	-	ams1	Synpcc7942_1703	0.14	-4.0
1,769,380	-	ams1	Synpcc7942_1703	0.14	-2.7
1,769,380	-	ams1	Synpcc7942_1703	0.14	-4.3
1,769,412	-	ams1	Synpcc7942_1703	0.15	-4.3
1,769,413	-	ams1	Synpcc7942_1703	0.15	-3.7
1,769,419	-	ams1	Synpcc7942_1703	0.16	-3.7
1,769,464	-	ams1	Synpcc7942_1703	0.17	-4.0
1,769,466	+	ams1	Synpcc7942_1703	0.17	-6.8
1,769,469	-	ams1	Synpcc7942_1703	0.17	-3.6
1,769,469	-	ams1	Synpcc7942_1703	0.17	-5.1
1,769,474	-	ams1	Synpcc7942_1703	0.17	-5.6
1,769,474	-	ams1	Synpcc7942_1703	0.17	-5.0
1,769,474	-	ams1	Synpcc7942_1703	0.17	-3.3
1,769,477	+	ams1	Synpcc7942_1703	0.17	-5.9