Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0726

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
829,599	+		Psyr_0725	0.30	+0.1
830,370	-				+4.4
830,370	-				-0.2
830,412	-				-0.9
830,457	+				-1.0
830,457	+				+1.0
830,457	+				-0.8
830,458	-				+2.1
830,458	-				-0.6
830,458	-				+1.7
830,458	-				+3.9
830,458	-				+1.0
830,479	-				+2.4
830,479	-				-0.9
830,480	+				+2.4
830,481	-				+2.9
830,481	-				+3.3
830,481	-				+4.6
830,546	+				-0.3
830,546	+				-1.8
830,547	-				+1.1
830,726	-		Psyr_0726	0.27	+4.6
830,970	+		Psyr_0726	0.52	+2.9
830,970	+		Psyr_0726	0.52	+2.0
830,971	-		Psyr_0726	0.52	+4.1
830,971	-		Psyr_0726	0.52	-0.4
830,974	+		Psyr_0726	0.53	+2.7
830,974	+		Psyr_0726	0.53	-1.1
830,974	+		Psyr_0726	0.53	+1.5
830,974	+		Psyr_0726	0.53	-0.1
830,975	-		Psyr_0726	0.53	+2.9
830,975	-		Psyr_0726	0.53	+4.5
830,975	-		Psyr_0726	0.53	+0.6
830,975	-		Psyr_0726	0.53	+1.1
831,134	+		Psyr_0726	0.69	+0.3
831,134	+		Psyr_0726	0.69	+3.9
831,135	-		Psyr_0726	0.69	+0.1
831,135	-		Psyr_0726	0.69	+0.8
831,135	-		Psyr_0726	0.69	+1.3
831,176	+		Psyr_0726	0.74	+4.2
831,442	+				+0.4
831,442	+				+0.9
831,442	+				-1.7
831,442	+				-3.9
831,442	+				+3.1
831,638	-		Psyr_0727	0.29	+1.1
831,638	-		Psyr_0727	0.29	-0.3
831,646	+		Psyr_0727	0.30	+0.8
831,646	+		Psyr_0727	0.30	-2.5
831,646	+		Psyr_0727	0.30	+0.9
831,647	-		Psyr_0727	0.30	+3.7
831,647	-		Psyr_0727	0.30	+0.3
831,718	+		Psyr_0727	0.40	-1.1
831,719	-		Psyr_0727	0.40	+1.9
831,719	-		Psyr_0727	0.40	+0.4
831,719	-		Psyr_0727	0.40	-1.6
831,719	-		Psyr_0727	0.40	-0.4
832,002	+		Psyr_0727	0.79	-1.1
832,002	+		Psyr_0727	0.79	+2.1
832,002	+		Psyr_0727	0.79	+2.1
832,002	+		Psyr_0727	0.79	+1.1
832,002	+		Psyr_0727	0.79	+2.9
832,003	-		Psyr_0727	0.79	+0.2
832,003	-		Psyr_0727	0.79	-1.0
832,003	-		Psyr_0727	0.79	+1.0
832,003	-		Psyr_0727	0.79	+3.4
832,003	-		Psyr_0727	0.79	+2.9
832,037	+		Psyr_0727	0.84	-1.1
832,038	-		Psyr_0727	0.84	-0.5
832,038	-		Psyr_0727	0.84	+3.7
832,038	-		Psyr_0727	0.84	+3.9
832,038	-		Psyr_0727	0.84	-0.1
832,182	+				-0.1
832,182	+				-4.3
832,183	-				-1.5
832,212	-				+2.9
832,212	-				-4.1
832,254	+				-0.0
832,254	+				-0.6
832,254	+				+0.5
832,254	+				-0.1
832,254	+				-1.1
832,255	-				+1.1
832,255	-				-4.1
832,255	-				+1.7
832,282	+				-1.9
832,282	+				-4.5
832,282	+				-1.4
832,282	+				+0.2
832,282	+				-1.6
832,283	-				+1.4
832,283	-				-2.0
832,283	-				+1.4
832,283	-				-0.3
832,283	-				-2.5
832,283	-				+0.1
832,283	-				-4.1
832,310	+				-1.2
832,350	-				+1.7
832,354	+				-2.4
832,354	+				-1.2
832,354	+				-0.8
832,355	-				+3.9
832,355	-				+3.8
832,360	+				-2.1
832,361	-				-1.5
832,361	-				+0.6