Experiment: L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20757 and SM_b20758 are separated by 11 nucleotides SM_b20758 and SM_b20759 are separated by 122 nucleotides SM_b20759 and SM_b20760 overlap by 1 nucleotides SM_b20760 and SM_b20761 are separated by 4 nucleotides
SM_b20757: SM_b20757 - methylmalonyl-CoA mutase, at 1,548,979 to 1,551,117
_b20757
SM_b20758: SM_b20758 - ArsR family transcriptional regulator, at 1,551,129 to 1,551,863
_b20758
SM_b20759: SM_b20759 - carbon-phosphorus lyase, at 1,551,986 to 1,552,456
_b20759
SM_b20760: SM_b20760 - carbon-phosphorus lyase, at 1,552,456 to 1,553,058
_b20760
SM_b20761: SM_b20761 - carbon-phosphorus lyase, at 1,553,063 to 1,554,169
_b20761
Position (kb)
1551
1552
1553 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5 at 1551.004 kb on + strand at 1551.004 kb on + strand at 1551.005 kb on - strand at 1551.011 kb on - strand at 1551.201 kb on + strand at 1551.371 kb on - strand, within SM_b20758 at 1551.409 kb on + strand, within SM_b20758 at 1551.409 kb on + strand, within SM_b20758 at 1551.410 kb on - strand, within SM_b20758 at 1551.773 kb on - strand, within SM_b20758 at 1551.823 kb on - strand at 1551.944 kb on - strand at 1552.478 kb on - strand at 1552.479 kb on + strand at 1552.661 kb on + strand, within SM_b20760 at 1552.817 kb on - strand, within SM_b20760 at 1553.056 kb on + strand at 1553.066 kb on + strand at 1553.066 kb on + strand at 1553.066 kb on + strand at 1553.066 kb on + strand at 1553.066 kb on + strand at 1553.066 kb on + strand at 1553.067 kb on - strand at 1553.067 kb on - strand at 1553.070 kb on + strand at 1553.163 kb on + strand at 1553.163 kb on + strand at 1553.164 kb on - strand at 1553.225 kb on + strand, within SM_b20761 at 1553.225 kb on + strand, within SM_b20761 at 1553.330 kb on + strand, within SM_b20761 at 1553.387 kb on + strand, within SM_b20761 at 1553.388 kb on - strand, within SM_b20761 at 1553.432 kb on + strand, within SM_b20761 at 1553.435 kb on - strand, within SM_b20761 at 1553.435 kb on - strand, within SM_b20761
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (N) remove 1,551,004 + +0.0 1,551,004 + +0.2 1,551,005 - +0.5 1,551,011 - -0.7 1,551,201 + -3.8 1,551,371 - SM_b20758 0.33 -2.8 1,551,409 + SM_b20758 0.38 -1.6 1,551,409 + SM_b20758 0.38 -0.9 1,551,410 - SM_b20758 0.38 -0.2 1,551,773 - SM_b20758 0.88 -2.4 1,551,823 - -3.5 1,551,944 - +5.3 1,552,478 - -0.2 1,552,479 + +0.7 1,552,661 + SM_b20760 0.34 +1.2 1,552,817 - SM_b20760 0.60 +0.8 1,553,056 + -1.4 1,553,066 + -0.3 1,553,066 + +0.5 1,553,066 + -0.1 1,553,066 + -2.7 1,553,066 + -1.7 1,553,066 + +0.6 1,553,067 - +0.3 1,553,067 - -1.5 1,553,070 + +0.0 1,553,163 + -3.0 1,553,163 + -1.9 1,553,164 - -2.3 1,553,225 + SM_b20761 0.15 -0.4 1,553,225 + SM_b20761 0.15 -0.1 1,553,330 + SM_b20761 0.24 +0.6 1,553,387 + SM_b20761 0.29 +0.7 1,553,388 - SM_b20761 0.29 +0.5 1,553,432 + SM_b20761 0.33 -1.1 1,553,435 - SM_b20761 0.34 -0.6 1,553,435 - SM_b20761 0.34 +2.7
Or see this region's nucleotide sequence