Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4179
Experiment: Chlorite 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Chlorite 1 mM |
---|---|---|---|---|---|
remove | |||||
4,627,531 | - | -1.0 | |||
4,627,531 | - | Pf1N1B4_4178 | 0.53 | -0.3 | |
4,627,834 | + | Pf1N1B4_4178 | 0.70 | -1.0 | |
4,627,834 | + | Pf1N1B4_4178 | 0.70 | -2.4 | |
4,628,328 | - | +0.2 | |||
4,628,391 | + | +0.6 | |||
4,628,515 | + | +0.4 | |||
4,628,516 | - | -1.3 | |||
4,628,521 | + | +0.9 | |||
4,628,711 | + | Pf1N1B4_4179 | 0.31 | -1.4 | |
4,628,711 | + | Pf1N1B4_4179 | 0.31 | -0.4 | |
4,628,712 | - | Pf1N1B4_4179 | 0.31 | -0.1 | |
4,628,741 | + | Pf1N1B4_4179 | 0.36 | -0.5 | |
4,628,806 | - | +0.6 | |||
4,628,885 | + | Pf1N1B4_4179 | 0.61 | -1.2 | |
4,628,953 | + | Pf1N1B4_4179 | 0.72 | -1.7 | |
4,628,954 | - | +0.0 | |||
4,629,149 | + | +1.9 | |||
4,629,149 | + | +0.1 | |||
4,629,456 | + | Pf1N1B4_4180 | 0.26 | +0.3 | |
4,629,457 | - | Pf1N1B4_4180 | 0.26 | +0.6 | |
4,629,457 | - | Pf1N1B4_4180 | 0.26 | +1.4 | |
4,629,784 | + | Pf1N1B4_4180 | 0.75 | -0.1 | |
4,629,784 | + | Pf1N1B4_4180 | 0.75 | -0.4 | |
4,629,926 | - | -2.0 | |||
4,629,966 | - | -1.0 | |||
4,630,003 | - | -0.7 | |||
4,630,018 | - | +0.6 | |||
4,630,064 | + | Pf1N1B4_4181 | 0.15 | -0.9 | |
4,630,065 | - | Pf1N1B4_4181 | 0.15 | -0.0 |
Or see this region's nucleotide sequence