Strain Fitness in Shewanella amazonensis SB2B around Sama_2182

Experiment: L-Histidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (N)
2,637,841	-				+2.2
2,637,841	-				+1.1
2,637,843	+				-1.0
2,637,843	+				+1.2
2,637,843	+				-1.7
2,637,843	+				-1.6
2,637,844	-				+0.0
2,637,844	-				+0.1
2,637,844	-				+3.6
2,637,844	-				+1.0
2,637,866	+		Sama_2181	0.10	+3.3
2,637,866	+		Sama_2181	0.10	+2.2
2,637,866	+		Sama_2181	0.10	-0.2
2,637,866	+		Sama_2181	0.10	-0.9
2,637,867	-		Sama_2181	0.10	-1.5
2,637,867	-		Sama_2181	0.10	+0.1
2,637,867	-		Sama_2181	0.10	-2.7
2,637,867	-		Sama_2181	0.10	+0.5
2,637,867	-		Sama_2181	0.10	+2.2
2,637,907	+		Sama_2181	0.14	+0.3
2,638,044	-		Sama_2181	0.28	-1.9
2,638,044	-		Sama_2181	0.28	-2.0
2,638,201	-		Sama_2181	0.44	-0.3
2,638,227	-		Sama_2181	0.46	+0.5
2,638,238	+		Sama_2181	0.48	-1.4
2,638,239	-		Sama_2181	0.48	+0.8
2,638,239	-		Sama_2181	0.48	-0.6
2,638,239	-		Sama_2181	0.48	+1.5
2,638,239	-		Sama_2181	0.48	+0.5
2,638,239	-		Sama_2181	0.48	+1.2
2,638,367	+		Sama_2181	0.61	-1.2
2,638,448	-		Sama_2181	0.69	-0.6
2,638,488	+		Sama_2181	0.73	-0.5
2,638,488	+		Sama_2181	0.73	+0.7
2,638,489	-		Sama_2181	0.73	-1.0
2,638,492	+		Sama_2181	0.73	-2.3
2,638,492	+		Sama_2181	0.73	-2.2
2,638,493	-		Sama_2181	0.73	+2.9
2,638,493	-		Sama_2181	0.73	+0.5
2,638,493	-		Sama_2181	0.73	+0.3
2,638,493	-		Sama_2181	0.73	+0.9
2,638,493	-		Sama_2181	0.73	-0.7
2,638,552	-		Sama_2181	0.79	+2.3
2,638,622	+		Sama_2181	0.86	+3.2
2,638,622	+		Sama_2181	0.86	-1.0
2,638,622	+		Sama_2181	0.86	-0.4
2,638,622	+		Sama_2181	0.86	+0.8
2,638,624	+		Sama_2181	0.86	+0.8
2,638,624	+		Sama_2181	0.86	+0.4
2,638,624	+		Sama_2181	0.86	+2.0
2,638,624	+		Sama_2181	0.86	-1.6
2,638,625	-		Sama_2181	0.86	+1.2
2,638,625	-		Sama_2181	0.86	+6.3
2,638,625	-		Sama_2181	0.86	-1.2
2,638,625	-		Sama_2181	0.86	+2.5
2,638,625	-		Sama_2181	0.86	+1.2
2,638,625	-		Sama_2181	0.86	+3.1
2,638,625	-		Sama_2181	0.86	+2.1
2,638,625	-		Sama_2181	0.86	+2.0
2,638,625	-		Sama_2181	0.86	+0.0
2,638,690	-				-1.3
2,638,740	-				-1.0
2,638,740	-				-1.3
2,638,746	+				-1.3
2,638,746	+				-2.0
2,638,795	+				+0.2
2,639,032	+				-1.3
2,639,033	-				+1.1
2,639,033	-				+1.3
2,639,037	-				+2.7
2,639,043	+				-2.1
2,639,099	-		Sama_2182	0.10	-0.8
2,639,117	-		Sama_2182	0.11	+2.1
2,639,117	-		Sama_2182	0.11	-2.4
2,639,127	+		Sama_2182	0.11	-1.5
2,639,127	+		Sama_2182	0.11	-0.7
2,639,192	+		Sama_2182	0.13	-1.4
2,639,219	+		Sama_2182	0.14	+1.8
2,639,219	+		Sama_2182	0.14	-2.6
2,639,220	-		Sama_2182	0.14	-0.1
2,639,307	-		Sama_2182	0.17	-0.3
2,639,307	-		Sama_2182	0.17	-2.1
2,639,307	-		Sama_2182	0.17	+2.0
2,639,334	+		Sama_2182	0.18	+0.6
2,639,334	+		Sama_2182	0.18	-1.5
2,639,334	+		Sama_2182	0.18	-2.9
2,639,335	-		Sama_2182	0.18	+0.4
2,639,335	-		Sama_2182	0.18	-1.9
2,639,372	+		Sama_2182	0.19	-1.3
2,639,409	+		Sama_2182	0.20	+2.6
2,639,439	-		Sama_2182	0.21	+1.0
2,639,495	-		Sama_2182	0.23	+0.0
2,639,512	+		Sama_2182	0.23	-1.2
2,639,512	+		Sama_2182	0.23	-1.0
2,639,512	+		Sama_2182	0.23	-0.6
2,639,513	-		Sama_2182	0.23	+1.0
2,639,586	+		Sama_2182	0.25	+1.8
2,639,587	-		Sama_2182	0.25	+1.0
2,639,667	+		Sama_2182	0.28	-0.4
2,639,745	-		Sama_2182	0.30	-2.2
2,639,745	-		Sama_2182	0.30	+0.7
2,639,745	-		Sama_2182	0.30	-1.5
2,639,806	-		Sama_2182	0.32	+0.0
2,639,855	-		Sama_2182	0.34	+0.4
2,639,855	-		Sama_2182	0.34	+0.6
2,639,855	-		Sama_2182	0.34	-1.6
2,639,933	+		Sama_2182	0.36	-2.0
2,639,934	-		Sama_2182	0.36	-0.6
2,639,934	-		Sama_2182	0.36	+1.5
2,639,934	-		Sama_2182	0.36	-2.5
2,639,934	-		Sama_2182	0.36	+1.8
2,639,982	-		Sama_2182	0.38	+0.6
2,639,982	-		Sama_2182	0.38	-2.2
2,640,081	-		Sama_2182	0.41	-0.7
2,640,087	-		Sama_2182	0.41	-0.3
2,640,166	+		Sama_2182	0.43	+1.3
2,640,167	-		Sama_2182	0.43	+1.6
2,640,213	+		Sama_2182	0.45	+0.8
2,640,213	+		Sama_2182	0.45	-1.3
2,640,213	+		Sama_2182	0.45	-2.2
2,640,214	-		Sama_2182	0.45	-0.5
2,640,214	-		Sama_2182	0.45	-1.0
2,640,214	-		Sama_2182	0.45	+0.4
2,640,214	-		Sama_2182	0.45	-1.1
2,640,215	+		Sama_2182	0.45	-0.5
2,640,215	+		Sama_2182	0.45	-2.2
2,640,215	+		Sama_2182	0.45	-0.9
2,640,215	+		Sama_2182	0.45	+2.2
2,640,215	+		Sama_2182	0.45	-1.9
2,640,215	+		Sama_2182	0.45	-1.4
2,640,216	-		Sama_2182	0.45	+2.5
2,640,216	-		Sama_2182	0.45	+0.3
2,640,276	-		Sama_2182	0.47	-2.1
2,640,281	+		Sama_2182	0.47	-0.6
2,640,282	-		Sama_2182	0.47	-2.3
2,640,308	-		Sama_2182	0.48	+0.0
2,640,390	-		Sama_2182	0.50	-0.4
2,640,390	-		Sama_2182	0.50	-0.0
2,640,432	-		Sama_2182	0.52	+0.1
2,640,474	-		Sama_2182	0.53	-1.8
2,640,474	-		Sama_2182	0.53	+0.3
2,640,601	+		Sama_2182	0.57	-0.4
2,640,601	+		Sama_2182	0.57	-0.8
2,640,602	-		Sama_2182	0.57	-0.8
2,640,650	+		Sama_2182	0.58	-1.0
2,640,650	+		Sama_2182	0.58	+2.0
2,640,651	-		Sama_2182	0.58	-0.6
2,640,651	-		Sama_2182	0.58	+2.8
2,640,651	-		Sama_2182	0.58	-1.4
2,640,660	+		Sama_2182	0.59	+1.7
2,640,661	-		Sama_2182	0.59	+1.0
2,640,661	-		Sama_2182	0.59	-0.2
2,640,661	-		Sama_2182	0.59	-0.1
2,640,661	-		Sama_2182	0.59	+0.9
2,640,708	+		Sama_2182	0.60	+3.5
2,640,883	+		Sama_2182	0.66	-0.3
2,640,884	-		Sama_2182	0.66	-2.7
2,640,893	+		Sama_2182	0.66	+1.4
2,640,947	+		Sama_2182	0.68	+2.0
2,640,968	+		Sama_2182	0.68	-1.3
2,640,969	-		Sama_2182	0.68	-1.0
2,640,996	-		Sama_2182	0.69	+0.7
2,640,996	-		Sama_2182	0.69	+0.2
2,641,019	+		Sama_2182	0.70	+1.7
2,641,019	+		Sama_2182	0.70	+0.8
2,641,019	+		Sama_2182	0.70	-1.5
2,641,019	+		Sama_2182	0.70	+2.4
2,641,019	+		Sama_2182	0.70	+0.4
2,641,019	+		Sama_2182	0.70	-1.3
2,641,019	+		Sama_2182	0.70	-0.2
2,641,019	+		Sama_2182	0.70	-1.2
2,641,019	+		Sama_2182	0.70	-1.8
2,641,020	-		Sama_2182	0.70	-1.8
2,641,020	-		Sama_2182	0.70	-0.2
2,641,020	-		Sama_2182	0.70	+1.9
2,641,020	-		Sama_2182	0.70	-0.4
2,641,020	-		Sama_2182	0.70	-2.0
2,641,020	-		Sama_2182	0.70	+2.0
2,641,020	-		Sama_2182	0.70	-1.0
2,641,020	-		Sama_2182	0.70	-0.2
2,641,020	-		Sama_2182	0.70	-0.1
2,641,030	+		Sama_2182	0.70	-2.1
2,641,030	+		Sama_2182	0.70	-1.4
2,641,047	-		Sama_2182	0.71	-0.0
2,641,071	+		Sama_2182	0.71	+0.1
2,641,071	+		Sama_2182	0.71	-1.8
2,641,072	-		Sama_2182	0.71	-0.7
2,641,081	+		Sama_2182	0.72	+2.3
2,641,081	+		Sama_2182	0.72	+0.3
2,641,082	-		Sama_2182	0.72	+1.8
2,641,082	-		Sama_2182	0.72	+1.8
2,641,082	-		Sama_2182	0.72	-1.6
2,641,187	+		Sama_2182	0.75	-1.8
2,641,188	-		Sama_2182	0.75	-0.2
2,641,188	-		Sama_2182	0.75	+0.9
2,641,266	-		Sama_2182	0.77	+1.2
2,641,267	+		Sama_2182	0.77	-1.1
2,641,267	+		Sama_2182	0.77	-0.3
2,641,267	+		Sama_2182	0.77	-1.3
2,641,267	+		Sama_2182	0.77	-0.2
2,641,267	+		Sama_2182	0.77	-2.0
2,641,267	+		Sama_2182	0.77	+1.4
2,641,268	-		Sama_2182	0.78	+2.8
2,641,271	+		Sama_2182	0.78	+0.6
2,641,272	-		Sama_2182	0.78	-0.3
2,641,272	-		Sama_2182	0.78	+1.4
2,641,272	-		Sama_2182	0.78	-1.7
2,641,282	+		Sama_2182	0.78	-2.0
2,641,282	+		Sama_2182	0.78	+0.0
2,641,283	-		Sama_2182	0.78	-2.5
2,641,417	-		Sama_2182	0.82	+3.6
2,641,428	+		Sama_2182	0.82	-1.2
2,641,428	+		Sama_2182	0.82	-0.6
2,641,429	-		Sama_2182	0.83	+1.1
2,641,429	-		Sama_2182	0.83	+1.1
2,641,429	-		Sama_2182	0.83	-1.5
2,641,429	-		Sama_2182	0.83	+1.1
2,641,494	+		Sama_2182	0.85	-1.8
2,641,494	+		Sama_2182	0.85	-0.2
2,641,494	+		Sama_2182	0.85	-0.9
2,641,494	+		Sama_2182	0.85	-1.0
2,641,495	-		Sama_2182	0.85	-1.1
2,641,495	-		Sama_2182	0.85	-1.4
2,641,524	+		Sama_2182	0.85	+2.0
2,641,524	+		Sama_2182	0.85	+1.9
2,641,524	+		Sama_2182	0.85	-1.5
2,641,525	-		Sama_2182	0.86	-1.8
2,641,525	-		Sama_2182	0.86	-1.1
2,641,531	+		Sama_2182	0.86	+0.1
2,641,549	-		Sama_2182	0.86	-1.6
2,641,578	+		Sama_2182	0.87	-1.4
2,641,578	+		Sama_2182	0.87	-0.4
2,641,595	+		Sama_2182	0.88	-2.1
2,641,595	+		Sama_2182	0.88	+2.5
2,641,595	+		Sama_2182	0.88	+1.0
2,641,681	+				-0.4
2,641,681	+				+0.5
2,641,681	+				+0.6
2,641,681	+				-1.7
2,641,681	+				+0.9
2,641,706	+				+1.2
2,641,706	+				-0.1
2,641,707	-				+2.7
2,641,707	-				-0.7
2,641,740	-				+0.4
2,641,740	-				-0.3
2,641,954	-				+0.6
2,641,954	-				-0.2
2,641,956	+				+1.6
2,641,965	-				-1.7
2,641,990	-				-0.9
2,642,000	-				+1.1
2,642,000	-				+1.4
2,642,016	+				+1.7
2,642,016	+				-1.3
2,642,017	-				-1.4
2,642,017	-				-1.9
2,642,034	+				+0.4
2,642,034	+				+4.2
2,642,034	+				+2.5
2,642,034	+				-2.2
2,642,034	+				+1.3
2,642,034	+				+2.1
2,642,034	+				-0.8
2,642,034	+				-1.8
2,642,035	-				-2.6
2,642,035	-				+2.3
2,642,035	-				+1.1
2,642,035	-				+1.5
2,642,035	-				+1.0
2,642,035	-				+0.5
2,642,035	-				-0.2
2,642,035	-				-0.8
2,642,037	+				+0.9
2,642,056	-		Sama_2183	0.18	+1.8
2,642,056	-		Sama_2183	0.18	-1.9
2,642,217	+				-2.0
2,642,223	-				-0.8
2,642,230	+				-2.6
2,642,230	+				+0.5
2,642,230	+				+1.3
2,642,236	+				-0.7
2,642,236	+				-3.2
2,642,236	+				+3.0
2,642,236	+				+0.2
2,642,236	+				+0.0
2,642,236	+				-1.4
2,642,237	-				-1.1
2,642,237	-				+0.4
2,642,279	+				+1.0
2,642,318	-		Sama_2184	0.14	-0.1
2,642,404	+		Sama_2184	0.36	-1.9
2,642,404	+		Sama_2184	0.36	-1.6
2,642,404	+		Sama_2184	0.36	-2.0
2,642,405	-		Sama_2184	0.36	-1.8
2,642,405	-		Sama_2184	0.36	+1.4
2,642,405	-		Sama_2184	0.36	-1.8
2,642,408	+		Sama_2184	0.37	-1.8
2,642,435	+		Sama_2184	0.44	+3.5
2,642,453	+		Sama_2184	0.48	+0.6
2,642,454	-		Sama_2184	0.48	+2.1
2,642,460	+		Sama_2184	0.50	+1.1
2,642,461	-		Sama_2184	0.50	-1.5
2,642,461	-		Sama_2184	0.50	-2.1
2,642,523	+		Sama_2184	0.66	-4.2
2,642,524	-		Sama_2184	0.66	+0.9
2,642,551	+		Sama_2184	0.73	-0.6
2,642,551	+		Sama_2184	0.73	+2.3
2,642,607	+		Sama_2184	0.88	-1.8
2,642,695	+				-1.7
2,642,844	+				-0.2
2,642,990	+				-0.3
2,642,991	-				+4.1