Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15505

Experiment: KLEB25 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KLEB25 MOI 1
3,248,106	+				-1.4
3,248,107	+		BWI76_RS15500	0.14	-0.3
3,248,174	-		BWI76_RS15500	0.20	-0.0
3,248,232	-		BWI76_RS15500	0.26	+1.2
3,248,232	-		BWI76_RS15500	0.26	-0.1
3,248,266	-		BWI76_RS15500	0.29	+0.0
3,248,367	-		BWI76_RS15500	0.38	+0.8
3,248,367	-		BWI76_RS15500	0.38	-1.0
3,248,367	-		BWI76_RS15500	0.38	+0.6
3,248,377	-		BWI76_RS15500	0.39	-0.4
3,248,387	-		BWI76_RS15500	0.40	+0.2
3,248,409	-		BWI76_RS15500	0.42	+0.3
3,248,409	-				+1.9
3,248,470	-		BWI76_RS15500	0.48	-0.6
3,248,472	+		BWI76_RS15500	0.48	+0.0
3,248,573	-		BWI76_RS15500	0.58	+0.2
3,248,580	-		BWI76_RS15500	0.59	-0.1
3,248,580	-		BWI76_RS15500	0.59	-0.7
3,248,580	-		BWI76_RS15500	0.59	+0.3
3,248,580	-		BWI76_RS15500	0.59	+0.1
3,248,594	+		BWI76_RS15500	0.60	+0.6
3,248,602	-		BWI76_RS15500	0.61	+0.7
3,248,602	-		BWI76_RS15500	0.61	-1.6
3,248,602	-		BWI76_RS15500	0.61	-0.4
3,248,627	-		BWI76_RS15500	0.63	+1.6
3,248,630	-		BWI76_RS15500	0.63	+0.0
3,248,673	-		BWI76_RS15500	0.67	+0.2
3,248,718	-		BWI76_RS15500	0.72	-0.1
3,248,722	-		BWI76_RS15500	0.72	-1.3
3,248,723	-		BWI76_RS15500	0.72	+0.1
3,248,759	+		BWI76_RS15500	0.75	+0.1
3,248,774	-		BWI76_RS15500	0.77	+0.7
3,248,774	-		BWI76_RS15500	0.77	-1.5
3,248,774	-		BWI76_RS15500	0.77	+1.7
3,248,774	-		BWI76_RS15500	0.77	+0.0
3,248,774	-		BWI76_RS15500	0.77	+1.6
3,248,781	+		BWI76_RS15500	0.78	-0.5
3,248,785	-		BWI76_RS15500	0.78	-0.5
3,248,790	-		BWI76_RS15500	0.78	+1.1
3,248,790	-		BWI76_RS15500	0.78	-0.8
3,248,790	-		BWI76_RS15500	0.78	+0.1
3,248,790	-		BWI76_RS15500	0.78	-0.6
3,248,790	-		BWI76_RS15500	0.78	-0.2
3,248,801	+		BWI76_RS15500	0.79	+1.3
3,248,801	+		BWI76_RS15500	0.79	+2.9
3,248,801	+		BWI76_RS15500	0.79	+3.5
3,248,801	+		BWI76_RS15500	0.79	-0.8
3,248,801	+				-0.0
3,248,801	+		BWI76_RS15500	0.79	+0.8
3,248,801	+		BWI76_RS15500	0.79	-1.2
3,248,801	+		BWI76_RS15500	0.79	-1.3
3,248,801	+				+3.3
3,248,801	+		BWI76_RS15500	0.79	+0.4
3,248,801	+		BWI76_RS15500	0.79	+1.5
3,248,809	-		BWI76_RS15500	0.80	-0.5
3,248,809	-				-0.9
3,248,809	-				-0.9
3,248,809	-		BWI76_RS15500	0.80	-0.1
3,248,809	-		BWI76_RS15500	0.80	-0.3
3,248,809	-		BWI76_RS15500	0.80	-0.5
3,248,809	-		BWI76_RS15500	0.80	-0.0
3,248,809	-		BWI76_RS15500	0.80	-1.4
3,248,809	-		BWI76_RS15500	0.80	-1.7
3,248,809	-		BWI76_RS15500	0.80	+0.0
3,248,809	-		BWI76_RS15500	0.80	-1.0
3,248,809	-		BWI76_RS15500	0.80	-0.4
3,248,809	-		BWI76_RS15500	0.80	-0.7
3,248,809	-		BWI76_RS15500	0.80	+0.0
3,248,809	-		BWI76_RS15500	0.80	-0.2
3,248,809	-		BWI76_RS15500	0.80	-0.5
3,248,809	-		BWI76_RS15500	0.80	+0.8
3,248,809	-		BWI76_RS15500	0.80	+0.2
3,248,809	-		BWI76_RS15500	0.80	+0.2
3,248,809	-		BWI76_RS15500	0.80	+0.4
3,248,809	-		BWI76_RS15500	0.80	+1.0
3,248,809	-		BWI76_RS15500	0.80	+0.3
3,248,809	-		BWI76_RS15500	0.80	-1.4
3,248,809	-		BWI76_RS15500	0.80	-1.3
3,248,809	-		BWI76_RS15500	0.80	-0.3
3,248,809	-		BWI76_RS15500	0.80	-0.4
3,248,809	-		BWI76_RS15500	0.80	-1.1
3,248,809	-		BWI76_RS15500	0.80	-1.2
3,248,825	-		BWI76_RS15500	0.82	-0.1
3,248,855	+		BWI76_RS15500	0.85	+0.2
3,248,895	-		BWI76_RS15500	0.88	+0.4
3,248,927	+				+1.2
3,248,935	-				-1.0
3,248,937	+				+0.3
3,248,937	+				+0.9
3,248,972	-				-0.0
3,248,989	-				-0.5
3,249,007	+				-0.4
3,249,015	-				+1.1
3,249,084	-				-0.4
3,249,084	-				+0.3
3,249,084	-				-0.4
3,249,108	+				-0.7
3,249,110	-				-0.9
3,249,131	+		BWI76_RS15505	0.16	+0.3
3,249,133	-		BWI76_RS15505	0.16	-0.1
3,249,139	-		BWI76_RS15505	0.18	-1.3
3,249,139	-		BWI76_RS15505	0.18	-0.1
3,249,139	-		BWI76_RS15505	0.18	-0.3
3,249,141	-		BWI76_RS15505	0.19	-0.2
3,249,141	-		BWI76_RS15505	0.19	-1.7
3,249,149	-		BWI76_RS15505	0.21	-0.4
3,249,149	-		BWI76_RS15505	0.21	-0.2
3,249,164	+		BWI76_RS15505	0.26	+0.1
3,249,172	+		BWI76_RS15505	0.28	-2.2
3,249,172	-		BWI76_RS15505	0.28	-0.3
3,249,241	+				+1.3
3,249,249	-		BWI76_RS15505	0.52	-1.0
3,249,288	+		BWI76_RS15505	0.63	-0.8
3,249,315	+				+0.7
3,249,342	-		BWI76_RS15505	0.80	-1.0
3,249,351	+		BWI76_RS15505	0.82	-1.3
3,249,351	+		BWI76_RS15505	0.82	-0.7
3,249,358	+		BWI76_RS15505	0.85	-1.4
3,249,368	+		BWI76_RS15505	0.88	+0.4
3,249,371	-		BWI76_RS15505	0.88	-0.7
3,249,502	-		BWI76_RS15510	0.39	+0.7
3,249,583	-		BWI76_RS15510	0.73	-0.7
3,249,835	+				-1.6
3,249,843	-				-1.4
3,249,843	-				-1.2
3,249,843	-				+0.4
3,249,843	-				-0.6
3,249,848	-				-1.3
3,249,849	+				+0.1
3,249,853	-				+1.7
3,250,021	+				-0.4
3,250,084	+				-0.2
3,250,092	-				-0.3
3,250,092	-				+0.2
3,250,094	-				+0.9
3,250,109	-				-0.4
3,250,193	-		BWI76_RS15515	0.17	-0.4
3,250,275	+		BWI76_RS15515	0.28	-0.0
3,250,278	-		BWI76_RS15515	0.29	-1.3
3,250,301	-		BWI76_RS15515	0.32	+0.6
3,250,348	-		BWI76_RS15515	0.39	+1.7
3,250,378	+		BWI76_RS15515	0.43	-0.4
3,250,386	-		BWI76_RS15515	0.44	-0.4
3,250,400	-		BWI76_RS15515	0.47	-0.6
3,250,400	-		BWI76_RS15515	0.47	-0.1